RNA–Protein interactions for RNA: ENST00000308769.12

RFWD2-201, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 1 (best) BASIC

Gene RFWD2, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-201ENST00000308769 NOVP48745 357 aa27.52■■■□□ 2
RFWD2-201ENST00000308769 ATP2C1P98194 919 aaPredicted RBP27.52■■■□□ 2
RFWD2-201ENST00000308769 PRR29P0C7W0 189 aa27.51■■□□□ 1.99
RFWD2-201ENST00000308769 POSTNQ15063 836 aa27.51■■□□□ 1.99
RFWD2-201ENST00000308769 POTEAQ6S8J7 498 aa27.51■■□□□ 1.99
RFWD2-201ENST00000308769 KIAA0825Q8IV33 1275 aa27.51■■□□□ 1.99
RFWD2-201ENST00000308769 ELOA2Q8IYF1 753 aaPredicted RBP27.51■■□□□ 1.99
RFWD2-201ENST00000308769 GRAMD1CQ8IYS0 662 aa27.51■■□□□ 1.99
RFWD2-201ENST00000308769 C17orf53Q8N3J3 647 aaPredicted RBP27.51■■□□□ 1.99
RFWD2-201ENST00000308769 FERMT2Q96AC1 680 aa27.51■■□□□ 1.99
RFWD2-201ENST00000308769 MRFAP1L1Q96HT8 127 aa27.51■■□□□ 1.99
RFWD2-201ENST00000308769 OSBPL5Q9H0X9 879 aaPredicted RBP27.51■■□□□ 1.99
RFWD2-201ENST00000308769 A0A087X0B3 334 aa27.5■■□□□ 1.99
RFWD2-201ENST00000308769 ACTN4O43707 911 aaKnown RBP27.5■■□□□ 1.99
RFWD2-201ENST00000308769 ECE2O60344 883 aa27.5■■□□□ 1.99
RFWD2-201ENST00000308769 AKR1B1P15121 316 aa27.5■■□□□ 1.99
RFWD2-201ENST00000308769 CRKP46108 304 aa27.5■■□□□ 1.99
RFWD2-201ENST00000308769 TRAPPC10P48553 1259 aa27.5■■□□□ 1.99
RFWD2-201ENST00000308769 CAMKK2Q96RR4 588 aa27.5■■□□□ 1.99
RFWD2-201ENST00000308769 LZTS2Q9BRK4 669 aa27.5■■□□□ 1.99
RFWD2-201ENST00000308769 SPZ1Q9BXG8 430 aa27.5■■□□□ 1.99
RFWD2-201ENST00000308769 BARHL2Q9NY43 387 aa27.5■■□□□ 1.99
RFWD2-201ENST00000308769 SERPINB13Q9UIV8 391 aa27.5■■□□□ 1.99
RFWD2-201ENST00000308769 PCDHAC2Q9Y5I4 1007 aa27.5■■□□□ 1.99
RFWD2-201ENST00000308769 STXBP3O00186 592 aa27.5■■□□□ 1.99
RFWD2-201ENST00000308769 MCM7P33993 719 aa27.5■■□□□ 1.99
RFWD2-201ENST00000308769 NFIAQ12857 509 aa27.5■■□□□ 1.99
RFWD2-201ENST00000308769 NCAPHQ15003 741 aa27.5■■□□□ 1.99
RFWD2-201ENST00000308769 CLEC10AQ8IUN9 316 aa27.5■■□□□ 1.99
RFWD2-201ENST00000308769 SYMPKQ92797 1274 aaKnown RBP27.5■■□□□ 1.99
RFWD2-201ENST00000308769 M0R2N6 131 aa27.49■■□□□ 1.99
RFWD2-201ENST00000308769 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.49■■□□□ 1.99
RFWD2-201ENST00000308769 NAP1L5Q96NT1 182 aaPredicted RBP27.49■■□□□ 1.99
RFWD2-201ENST00000308769 HOOK1Q9UJC3 728 aaKnown RBP27.49■■□□□ 1.99
RFWD2-201ENST00000308769 PYCARDQ9ULZ3 195 aa27.49■■□□□ 1.99
RFWD2-201ENST00000308769 VWA3AA6NCI4 1184 aa27.49■■□□□ 1.99
RFWD2-201ENST00000308769 CCDC144BQ3MJ40 725 aa27.49■■□□□ 1.99
RFWD2-201ENST00000308769 MTMR4Q9NYA4 1195 aa27.49■■□□□ 1.99
RFWD2-201ENST00000308769 MYH4Q9Y623 1939 aa27.48■■□□□ 1.99
RFWD2-201ENST00000308769 EIF6P56537 245 aaKnown RBP27.48■■□□□ 1.99
RFWD2-201ENST00000308769 CCDC148Q8NFR7 591 aa27.48■■□□□ 1.99
RFWD2-201ENST00000308769 STK32BQ9NY57 414 aa27.48■■□□□ 1.99
RFWD2-201ENST00000308769 SIPA1L1O43166 1804 aa27.48■■□□□ 1.99
RFWD2-201ENST00000308769 USP17L5A8MUK1 530 aa27.47■■□□□ 1.99
RFWD2-201ENST00000308769 BMP6P22004 513 aa27.47■■□□□ 1.99
RFWD2-201ENST00000308769 HOMER1Q86YM7 354 aa27.47■■□□□ 1.99
RFWD2-201ENST00000308769 DHX58Q96C10 678 aa27.47■■□□□ 1.99
RFWD2-201ENST00000308769 GREB1LQ9C091 1923 aaPredicted RBP27.47■■□□□ 1.99
RFWD2-201ENST00000308769 SLURP2P0DP57 97 aa27.47■■□□□ 1.99
RFWD2-201ENST00000308769 DACT2Q5SW24 774 aa27.47■■□□□ 1.99
RFWD2-201ENST00000308769 STRIP1Q5VSL9 837 aa27.47■■□□□ 1.99
RFWD2-201ENST00000308769 LRRC47Q8N1G4 583 aaKnown RBP27.47■■□□□ 1.99
RFWD2-201ENST00000308769 CNKSR1Q969H4 720 aa27.47■■□□□ 1.99
RFWD2-201ENST00000308769 ZDHHC15Q96MV8 337 aa27.47■■□□□ 1.99
RFWD2-201ENST00000308769 PCDHA6Q9UN73 950 aa27.47■■□□□ 1.99
RFWD2-201ENST00000308769 PCDHA8Q9Y5H6 950 aa27.47■■□□□ 1.99
RFWD2-201ENST00000308769 SHMT1P34896 483 aa27.46■■□□□ 1.99
RFWD2-201ENST00000308769 CACNB3P54284 484 aa27.46■■□□□ 1.99
RFWD2-201ENST00000308769 AOC3Q16853 763 aa27.46■■□□□ 1.99
RFWD2-201ENST00000308769 IGKV6D-41A0A0C4DH26 115 aa27.46■■□□□ 1.99
RFWD2-201ENST00000308769 PDHBP11177 359 aa27.46■■□□□ 1.99
RFWD2-201ENST00000308769 LRMPQ12912 555 aa27.46■■□□□ 1.99
RFWD2-201ENST00000308769 ZFPM1Q8IX07 1006 aa27.46■■□□□ 1.99
RFWD2-201ENST00000308769 DAGLBQ8NCG7 672 aa27.46■■□□□ 1.99
RFWD2-201ENST00000308769 MAN1B1Q9UKM7 699 aa27.46■■□□□ 1.99
RFWD2-201ENST00000308769 FRMPD2Q68DX3 1309 aaPredicted RBP27.45■■□□□ 1.99
RFWD2-201ENST00000308769 CCDC194A0A1B0GVG4 234 aa27.45■■□□□ 1.98
RFWD2-201ENST00000308769 SMTNL1A8MU46 457 aa27.45■■□□□ 1.98
RFWD2-201ENST00000308769 IKBKBO14920 756 aa27.45■■□□□ 1.98
RFWD2-201ENST00000308769 NOLC1Q14978 699 aaKnown RBP eCLIP27.45■■□□□ 1.98
RFWD2-201ENST00000308769 C7orf43Q8WVR3 580 aa27.45■■□□□ 1.98
RFWD2-201ENST00000308769 PDGFDQ9GZP0 370 aaPredicted RBP27.45■■□□□ 1.98
RFWD2-201ENST00000308769 UBA5Q9GZZ9 404 aa27.45■■□□□ 1.98
RFWD2-201ENST00000308769 VAT1LQ9HCJ6 419 aa27.45■■□□□ 1.98
RFWD2-201ENST00000308769 SWAP70Q9UH65 585 aa27.45■■□□□ 1.98
RFWD2-201ENST00000308769 IL17AQ16552 155 aa27.44■■□□□ 1.98
RFWD2-201ENST00000308769 NT5DC1Q5TFE4 455 aa27.44■■□□□ 1.98
RFWD2-201ENST00000308769 KIAA1524Q8TCG1 905 aa27.44■■□□□ 1.98
RFWD2-201ENST00000308769 HSD3B7Q9H2F3 369 aa27.44■■□□□ 1.98
RFWD2-201ENST00000308769 RRP36Q96EU6 259 aaKnown RBP27.44■■□□□ 1.98
RFWD2-201ENST00000308769 HLA-DOAP06340 250 aa27.43■■□□□ 1.98
RFWD2-201ENST00000308769 LMOD1P29536 600 aaPredicted RBP27.43■■□□□ 1.98
RFWD2-201ENST00000308769 SARSP49591 514 aaKnown RBP27.43■■□□□ 1.98
RFWD2-201ENST00000308769 RBM5P52756 815 aaKnown RBP eCLIP27.43■■□□□ 1.98
RFWD2-201ENST00000308769 NAPAP54920 295 aa27.43■■□□□ 1.98
RFWD2-201ENST00000308769 GALNT17Q6IS24 598 aa27.43■■□□□ 1.98
RFWD2-201ENST00000308769 KANK3Q6NY19 840 aa27.43■■□□□ 1.98
RFWD2-201ENST00000308769 SMARCE1Q969G3 411 aa27.43■■□□□ 1.98
RFWD2-201ENST00000308769 PIGSQ96S52 555 aa27.43■■□□□ 1.98
RFWD2-201ENST00000308769 TPM4P67936 248 aa27.43■■□□□ 1.98
RFWD2-201ENST00000308769 TCP10Q12799 353 aa27.43■■□□□ 1.98
RFWD2-201ENST00000308769 INF2Q27J81 1249 aa27.43■■□□□ 1.98
RFWD2-201ENST00000308769 FKBP1AP62942 108 aaKnown RBP27.42■■□□□ 1.98
RFWD2-201ENST00000308769 C4orf32Q8N8J7 132 aa27.42■■□□□ 1.98
RFWD2-201ENST00000308769 ZMYND12Q9H0C1 365 aa27.42■■□□□ 1.98
RFWD2-201ENST00000308769 SEC63Q9UGP8 760 aaKnown RBP27.42■■□□□ 1.98
RFWD2-201ENST00000308769 MYO3BQ8WXR4 1341 aa27.42■■□□□ 1.98
RFWD2-201ENST00000308769 TTLL1O95922 423 aa27.41■■□□□ 1.98
RFWD2-201ENST00000308769 SLFN14P0C7P3 912 aa27.41■■□□□ 1.98
RFWD2-201ENST00000308769 MYL5Q02045 173 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms