RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 UBA5Q9GZZ9 404 aa25.77■■□□□ 1.72
PDLIM2-202ENST00000308354 DHX36Q9H2U1 1008 aaKnown RBP25.77■■□□□ 1.72
PDLIM2-202ENST00000308354 VIL1P09327 827 aaKnown RBP25.76■■□□□ 1.71
PDLIM2-202ENST00000308354 GRIN1Q05586 938 aa25.76■■□□□ 1.71
PDLIM2-202ENST00000308354 DALRD3Q5D0E6 543 aaKnown RBP25.76■■□□□ 1.71
PDLIM2-202ENST00000308354 HEATR3Q7Z4Q2 680 aa25.76■■□□□ 1.71
PDLIM2-202ENST00000308354 HOMER1Q86YM7 354 aa25.76■■□□□ 1.71
PDLIM2-202ENST00000308354 EHD4Q9H223 541 aa25.76■■□□□ 1.71
PDLIM2-202ENST00000308354 PI4KBQ9UBF8 816 aa25.76■■□□□ 1.71
PDLIM2-202ENST00000308354 MYH8P13535 1937 aa25.76■■□□□ 1.71
PDLIM2-202ENST00000308354 A0A087WWV3 80 aa25.76■■□□□ 1.71
PDLIM2-202ENST00000308354 CLRN2A0PK11 232 aa25.76■■□□□ 1.71
PDLIM2-202ENST00000308354 WWC2Q6AWC2 1192 aa25.76■■□□□ 1.71
PDLIM2-202ENST00000308354 KIF13BQ9NQT8 1826 aa25.76■■□□□ 1.71
PDLIM2-202ENST00000308354 PDHBP11177 359 aa25.75■■□□□ 1.71
PDLIM2-202ENST00000308354 ZNF165P49910 485 aa25.75■■□□□ 1.71
PDLIM2-202ENST00000308354 SDF4Q9BRK5 362 aa25.75■■□□□ 1.71
PDLIM2-202ENST00000308354 ZNF202O95125 648 aa25.75■■□□□ 1.71
PDLIM2-202ENST00000308354 TTLL1O95922 423 aa25.75■■□□□ 1.71
PDLIM2-202ENST00000308354 PIK3AP1Q6ZUJ8 805 aa25.75■■□□□ 1.71
PDLIM2-202ENST00000308354 NIM1KQ8IY84 436 aa25.75■■□□□ 1.71
PDLIM2-202ENST00000308354 KRI1Q8N9T8 703 aaKnown RBP25.74■■□□□ 1.71
PDLIM2-202ENST00000308354 GMLQ99445 158 aa25.74■■□□□ 1.71
PDLIM2-202ENST00000308354 ZNRF3Q9ULT6 936 aa25.74■■□□□ 1.71
PDLIM2-202ENST00000308354 TCP10L2B9ZVM9 353 aa25.73■■□□□ 1.71
PDLIM2-202ENST00000308354 RASGRP4Q8TDF6 673 aa25.73■■□□□ 1.71
PDLIM2-202ENST00000308354 MYO3BQ8WXR4 1341 aa25.73■■□□□ 1.71
PDLIM2-202ENST00000308354 PSDA5PKW4 1024 aaPredicted RBP25.73■■□□□ 1.71
PDLIM2-202ENST00000308354 SPDYE2BA6NHP3 402 aa25.73■■□□□ 1.71
PDLIM2-202ENST00000308354 SPDYE6P0CI01 402 aa25.73■■□□□ 1.71
PDLIM2-202ENST00000308354 LZTS2Q9BRK4 669 aa25.73■■□□□ 1.71
PDLIM2-202ENST00000308354 TRIM34Q9BYJ4 488 aa25.73■■□□□ 1.71
PDLIM2-202ENST00000308354 SIPA1L1O43166 1804 aa25.73■■□□□ 1.71
PDLIM2-202ENST00000308354 TRIM75PA6NK02 468 aa25.72■■□□□ 1.71
PDLIM2-202ENST00000308354 CUTAO60888 179 aa25.72■■□□□ 1.71
PDLIM2-202ENST00000308354 CERKLQ49MI3 558 aaPredicted RBP25.72■■□□□ 1.71
PDLIM2-202ENST00000308354 SOGA3Q5TF21 947 aa25.72■■□□□ 1.71
PDLIM2-202ENST00000308354 OGFOD1Q8N543 542 aa25.72■■□□□ 1.71
PDLIM2-202ENST00000308354 SPZ1Q9BXG8 430 aa25.72■■□□□ 1.71
PDLIM2-202ENST00000308354 FBXO2Q9UK22 296 aaPredicted RBP25.72■■□□□ 1.71
PDLIM2-202ENST00000308354 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.72■■□□□ 1.71
PDLIM2-202ENST00000308354 ZNF174Q15697 407 aa25.72■■□□□ 1.71
PDLIM2-202ENST00000308354 STX1AQ16623 288 aa25.72■■□□□ 1.71
PDLIM2-202ENST00000308354 RESP18Q5W5W9 173 aa25.72■■□□□ 1.71
PDLIM2-202ENST00000308354 C11orf57Q6ZUT1 292 aaPredicted RBP25.72■■□□□ 1.71
PDLIM2-202ENST00000308354 PIGSQ96S52 555 aa25.72■■□□□ 1.71
PDLIM2-202ENST00000308354 GPCPD1Q9NPB8 672 aa25.72■■□□□ 1.71
PDLIM2-202ENST00000308354 DLGAP5Q15398 846 aa25.71■■□□□ 1.71
PDLIM2-202ENST00000308354 BLIDQ8IZY5 108 aa25.71■■□□□ 1.71
PDLIM2-202ENST00000308354 STXBP3O00186 592 aa25.71■■□□□ 1.71
PDLIM2-202ENST00000308354 GDF11O95390 407 aa25.71■■□□□ 1.71
PDLIM2-202ENST00000308354 SYKP43405 635 aa25.71■■□□□ 1.71
PDLIM2-202ENST00000308354 CXCL9Q07325 125 aa25.71■■□□□ 1.71
PDLIM2-202ENST00000308354 SH3GLB2Q9NR46 395 aa25.71■■□□□ 1.71
PDLIM2-202ENST00000308354 BARHL2Q9NY43 387 aa25.71■■□□□ 1.71
PDLIM2-202ENST00000308354 HPSEQ9Y251 543 aa25.71■■□□□ 1.71
PDLIM2-202ENST00000308354 RAD21O60216 631 aa25.7■■□□□ 1.7
PDLIM2-202ENST00000308354 NPM3O75607 178 aaKnown RBP25.7■■□□□ 1.7
PDLIM2-202ENST00000308354 PTPREP23469 700 aa25.7■■□□□ 1.7
PDLIM2-202ENST00000308354 CCDC17Q96LX7 622 aa25.7■■□□□ 1.7
PDLIM2-202ENST00000308354 CSRNP1Q96S65 589 aa25.7■■□□□ 1.7
PDLIM2-202ENST00000308354 TAOK3Q9H2K8 898 aa25.7■■□□□ 1.7
PDLIM2-202ENST00000308354 HDAC9Q9UKV0 1011 aa25.7■■□□□ 1.7
PDLIM2-202ENST00000308354 PCDHA4Q9UN74 947 aa25.7■■□□□ 1.7
PDLIM2-202ENST00000308354 BCS1LQ9Y276 419 aa25.7■■□□□ 1.7
PDLIM2-202ENST00000308354 CAVIN2O95810 425 aa25.69■■□□□ 1.7
PDLIM2-202ENST00000308354 CALML3P27482 149 aa25.69■■□□□ 1.7
PDLIM2-202ENST00000308354 RRP36Q96EU6 259 aaKnown RBP25.69■■□□□ 1.7
PDLIM2-202ENST00000308354 CEP131Q9UPN4 1083 aa25.69■■□□□ 1.7
PDLIM2-202ENST00000308354 PSME4Q14997 1843 aa25.69■■□□□ 1.7
PDLIM2-202ENST00000308354 ZNF500O60304 480 aaPredicted RBP25.69■■□□□ 1.7
PDLIM2-202ENST00000308354 ENTPD3O75355 529 aa25.69■■□□□ 1.7
PDLIM2-202ENST00000308354 TTC38Q5R3I4 469 aa25.69■■□□□ 1.7
PDLIM2-202ENST00000308354 ZNF830Q96NB3 372 aaPredicted RBP25.69■■□□□ 1.7
PDLIM2-202ENST00000308354 FOXP4Q8IVH2 680 aaPredicted RBP25.68■■□□□ 1.7
PDLIM2-202ENST00000308354 ZNF70Q9UC06 446 aaPredicted RBP25.68■■□□□ 1.7
PDLIM2-202ENST00000308354 NFKBIEO00221 500 aa25.68■■□□□ 1.7
PDLIM2-202ENST00000308354 SNHG28P0DPA3 235 aa25.68■■□□□ 1.7
PDLIM2-202ENST00000308354 EEF2P13639 858 aaKnown RBP25.68■■□□□ 1.7
PDLIM2-202ENST00000308354 SEPT2Q15019 361 aa25.68■■□□□ 1.7
PDLIM2-202ENST00000308354 TTBK2Q6IQ55 1244 aa25.68■■□□□ 1.7
PDLIM2-202ENST00000308354 TATDN1Q6P1N9 297 aa25.68■■□□□ 1.7
PDLIM2-202ENST00000308354 VPS33BQ9H267 617 aa25.68■■□□□ 1.7
PDLIM2-202ENST00000308354 TMOD2Q9NZR1 351 aa25.68■■□□□ 1.7
PDLIM2-202ENST00000308354 SEC63Q9UGP8 760 aaKnown RBP25.68■■□□□ 1.7
PDLIM2-202ENST00000308354 SHTN1A0MZ66 631 aa25.67■■□□□ 1.7
PDLIM2-202ENST00000308354 NAPAP54920 295 aa25.67■■□□□ 1.7
PDLIM2-202ENST00000308354 KCTD1Q719H9 257 aa25.67■■□□□ 1.7
PDLIM2-202ENST00000308354 VEZTQ9HBM0 779 aa25.67■■□□□ 1.7
PDLIM2-202ENST00000308354 KCNH3Q9ULD8 1083 aa25.67■■□□□ 1.7
PDLIM2-202ENST00000308354 SRPRBQ9Y5M8 271 aaKnown RBP25.67■■□□□ 1.7
PDLIM2-202ENST00000308354 JAG1P78504 1218 aa25.67■■□□□ 1.7
PDLIM2-202ENST00000308354 IQCB1Q15051 598 aa25.67■■□□□ 1.7
PDLIM2-202ENST00000308354 ASPRV1Q53RT3 343 aa25.67■■□□□ 1.7
PDLIM2-202ENST00000308354 USP49Q70CQ1 688 aa25.67■■□□□ 1.7
PDLIM2-202ENST00000308354 SGIP1Q9BQI5 828 aa25.67■■□□□ 1.7
PDLIM2-202ENST00000308354 CSRNP2Q9H175 543 aa25.67■■□□□ 1.7
PDLIM2-202ENST00000308354 RIOX1Q9H6W3 641 aa25.67■■□□□ 1.7
PDLIM2-202ENST00000308354 SLC16A2P36021 539 aa25.66■■□□□ 1.7
PDLIM2-202ENST00000308354 ZNF543Q08ER8 600 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms