RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 CEP57L1Q8IYX8 460 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 BLIDQ8IZY5 108 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 AOPEPQ8N6M6 819 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 RASGRP4Q8TDF6 673 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 CNKSR1Q969H4 720 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 EPSTI1Q96J88 318 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 MRIQ9BWK5 157 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 KCNF1Q9H3M0 494 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 SERPINB13Q9UIV8 391 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 PCDHA4Q9UN74 947 aa7.5□□□□□ -1.21
USP47-201ENST00000305481 BMP6P22004 513 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 FKBP1AP62942 108 aaKnown RBP7.49□□□□□ -1.21
USP47-201ENST00000305481 PTGDRQ13258 359 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 IL17AQ16552 155 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 SARM1Q6SZW1 724 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 BPIFA3Q9BQP9 254 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 SPZ1Q9BXG8 430 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 TRIM5Q9C035 493 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 DNAJC18Q9H819 358 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 BARHL2Q9NY43 387 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 YDJCA8MPS7 323 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 ACTN4O43707 911 aaKnown RBP7.49□□□□□ -1.21
USP47-201ENST00000305481 PARP1P09874 1014 aaKnown RBP7.49□□□□□ -1.21
USP47-201ENST00000305481 ATP2C1P98194 919 aaPredicted RBP7.49□□□□□ -1.21
USP47-201ENST00000305481 NCAPHQ15003 741 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 DEFB132Q7Z7B7 95 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 DHX37Q8IY37 1157 aaKnown RBP7.49□□□□□ -1.21
USP47-201ENST00000305481 ELOA2Q8IYF1 753 aaPredicted RBP7.49□□□□□ -1.21
USP47-201ENST00000305481 C4orf32Q8N8J7 132 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 CNNM3Q8NE01 707 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 FAM198AQ9UFP1 575 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 SERTAD1Q9UHV2 236 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 NRBP1Q9UHY1 535 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 PCDHA6Q9UN73 950 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 PCDHA8Q9Y5H6 950 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 PCDHA5Q9Y5H7 936 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 GOLGA6L19H0YKK7 550 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 C21orf2O43822 256 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 PRR29P0C7W0 189 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 PDHBP11177 359 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 CALML3P27482 149 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 EIF6P56537 245 aaKnown RBP7.49□□□□□ -1.21
USP47-201ENST00000305481 KIAA2012Q0VF49 1180 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 SH3BP5LQ7L8J4 393 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 HEATR3Q7Z4Q2 680 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 GRAMD1CQ8IYS0 662 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 LZTS2Q9BRK4 669 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 HSD3B7Q9H2F3 369 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 FAM13BQ9NYF5 915 aa7.49□□□□□ -1.21
USP47-201ENST00000305481 DDTLA6NHG4 134 aaPredicted RBP7.48□□□□□ -1.21
USP47-201ENST00000305481 TRAPPC10P48553 1259 aa7.48□□□□□ -1.21
USP47-201ENST00000305481 LRRC47Q8N1G4 583 aaKnown RBP7.48□□□□□ -1.21
USP47-201ENST00000305481 PDILTQ8N807 584 aa7.48□□□□□ -1.21
USP47-201ENST00000305481 DAGLBQ8NCG7 672 aa7.48□□□□□ -1.21
USP47-201ENST00000305481 NAT10Q9H0A0 1025 aaKnown RBP7.48□□□□□ -1.21
USP47-201ENST00000305481 SIPA1L1O43166 1804 aa7.48□□□□□ -1.21
USP47-201ENST00000305481 BECN2A8MW95 431 aa7.48□□□□□ -1.21
USP47-201ENST00000305481 SNHG28P0DPA3 235 aa7.48□□□□□ -1.21
USP47-201ENST00000305481 KCNA3P22001 575 aa7.48□□□□□ -1.21
USP47-201ENST00000305481 MCM7P33993 719 aa7.48□□□□□ -1.21
USP47-201ENST00000305481 SARSP49591 514 aaKnown RBP7.48□□□□□ -1.21
USP47-201ENST00000305481 HDLBPQ00341 1268 aaKnown RBP7.48□□□□□ -1.21
USP47-201ENST00000305481 TCP10Q12799 353 aa7.48□□□□□ -1.21
USP47-201ENST00000305481 SHROOM1Q2M3G4 852 aaPredicted RBP7.48□□□□□ -1.21
USP47-201ENST00000305481 PAXIP1Q6ZW49 1069 aaPredicted RBP7.48□□□□□ -1.21
USP47-201ENST00000305481 SYMPKQ92797 1274 aaKnown RBP7.48□□□□□ -1.21
USP47-201ENST00000305481 FERMT2Q96AC1 680 aa7.48□□□□□ -1.21
USP47-201ENST00000305481 UBA5Q9GZZ9 404 aa7.48□□□□□ -1.21
USP47-201ENST00000305481 SWAP70Q9UH65 585 aa7.48□□□□□ -1.21
USP47-201ENST00000305481 C10orf71Q711Q0 1435 aa7.48□□□□□ -1.21
USP47-201ENST00000305481 FAM196BA6NMK8 535 aa7.48□□□□□ -1.21
USP47-201ENST00000305481 SMARCA1P28370 1054 aa7.48□□□□□ -1.21
USP47-201ENST00000305481 POSTNQ15063 836 aa7.48□□□□□ -1.21
USP47-201ENST00000305481 NT5DC1Q5TFE4 455 aa7.48□□□□□ -1.21
USP47-201ENST00000305481 PIGSQ96S52 555 aa7.48□□□□□ -1.21
USP47-201ENST00000305481 IDI2Q9BXS1 227 aa7.48□□□□□ -1.21
USP47-201ENST00000305481 ZMYND12Q9H0C1 365 aa7.48□□□□□ -1.21
USP47-201ENST00000305481 EHD4Q9H223 541 aa7.48□□□□□ -1.21
USP47-201ENST00000305481 RIOX1Q9H6W3 641 aa7.48□□□□□ -1.21
USP47-201ENST00000305481 CLIP2Q9UDT6 1046 aa7.48□□□□□ -1.21
USP47-201ENST00000305481 FRMPD2Q68DX3 1309 aaPredicted RBP7.47□□□□□ -1.21
USP47-201ENST00000305481 MYO3BQ8WXR4 1341 aa7.47□□□□□ -1.21
USP47-201ENST00000305481 GREB1LQ9C091 1923 aaPredicted RBP7.47□□□□□ -1.21
USP47-201ENST00000305481 UTRNP46939 3433 aa7.47□□□□□ -1.21
USP47-201ENST00000305481 VWA3AA6NCI4 1184 aa7.47□□□□□ -1.21
USP47-201ENST00000305481 BMP15O95972 392 aa7.47□□□□□ -1.21
USP47-201ENST00000305481 PTGS1P23219 599 aa7.47□□□□□ -1.21
USP47-201ENST00000305481 CDC25BP30305 580 aa7.47□□□□□ -1.21
USP47-201ENST00000305481 CCDC144BQ3MJ40 725 aa7.47□□□□□ -1.21
USP47-201ENST00000305481 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.47□□□□□ -1.21
USP47-201ENST00000305481 HOMER1Q86YM7 354 aa7.47□□□□□ -1.21
USP47-201ENST00000305481 SPATA20Q8TB22 786 aa7.47□□□□□ -1.21
USP47-201ENST00000305481 VAT1LQ9HCJ6 419 aa7.47□□□□□ -1.21
USP47-201ENST00000305481 MYH8P13535 1937 aa7.47□□□□□ -1.21
USP47-201ENST00000305481 COL4A5P29400 1685 aa7.47□□□□□ -1.21
USP47-201ENST00000305481 TTLL1O95922 423 aa7.47□□□□□ -1.21
USP47-201ENST00000305481 RBM5P52756 815 aaKnown RBP eCLIP7.47□□□□□ -1.21
USP47-201ENST00000305481 ZRSR1Q15695 479 aaKnown RBP7.47□□□□□ -1.21
USP47-201ENST00000305481 CCDC186Q7Z3E2 898 aa7.47□□□□□ -1.21
USP47-201ENST00000305481 C17orf53Q8N3J3 647 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms