RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 CEP85LQ5SZL2 805 aa14.56□□□□□ -0.08
TRIM35-201ENST00000305364 ZNF654Q8IZM8 581 aa14.56□□□□□ -0.08
TRIM35-201ENST00000305364 FANCBQ8NB91 859 aa14.56□□□□□ -0.08
TRIM35-201ENST00000305364 OXER1Q8TDS5 423 aa14.56□□□□□ -0.08
TRIM35-201ENST00000305364 EXOC1Q9NV70 894 aa14.56□□□□□ -0.08
TRIM35-201ENST00000305364 TRMT112Q9UI30 125 aaKnown RBP14.56□□□□□ -0.08
TRIM35-201ENST00000305364 ZNF185O15231 689 aa14.56□□□□□ -0.08
TRIM35-201ENST00000305364 PARP1P09874 1014 aaKnown RBP14.56□□□□□ -0.08
TRIM35-201ENST00000305364 UQCRFS1P1P0C7P4 283 aa14.56□□□□□ -0.08
TRIM35-201ENST00000305364 ASIC1P78348 528 aa14.56□□□□□ -0.08
TRIM35-201ENST00000305364 PTGDRQ13258 359 aa14.56□□□□□ -0.08
TRIM35-201ENST00000305364 CHRNA2Q15822 529 aa14.56□□□□□ -0.08
TRIM35-201ENST00000305364 ATG9AQ7Z3C6 839 aa14.56□□□□□ -0.08
TRIM35-201ENST00000305364 IFT20Q8IY31 132 aa14.56□□□□□ -0.08
TRIM35-201ENST00000305364 CXorf56Q9H5V9 222 aa14.56□□□□□ -0.08
TRIM35-201ENST00000305364 ITSN1Q15811 1721 aa14.56□□□□□ -0.08
TRIM35-201ENST00000305364 SF3A3Q12874 501 aaKnown RBP eCLIP14.55□□□□□ -0.08
TRIM35-201ENST00000305364 ARFGAP2Q8N6H7 521 aa14.55□□□□□ -0.08
TRIM35-201ENST00000305364 TRIM58Q8NG06 486 aa14.55□□□□□ -0.08
TRIM35-201ENST00000305364 DIP2CQ9Y2E4 1556 aa14.55□□□□□ -0.08
TRIM35-201ENST00000305364 SCARF1Q14162 830 aa14.55□□□□□ -0.08
TRIM35-201ENST00000305364 TAX1BP1Q86VP1 789 aa14.55□□□□□ -0.08
TRIM35-201ENST00000305364 TTC26A0AVF1 554 aa14.55□□□□□ -0.08
TRIM35-201ENST00000305364 PDE6AP16499 860 aa14.55□□□□□ -0.08
TRIM35-201ENST00000305364 MAGEA1P43355 309 aa14.55□□□□□ -0.08
TRIM35-201ENST00000305364 ARID5AQ03989 594 aa14.55□□□□□ -0.08
TRIM35-201ENST00000305364 RABL6Q3YEC7 729 aaPredicted RBP14.55□□□□□ -0.08
TRIM35-201ENST00000305364 TCP11X2Q5H9J9 407 aa14.55□□□□□ -0.08
TRIM35-201ENST00000305364 CPLX4Q7Z7G2 160 aa14.55□□□□□ -0.08
TRIM35-201ENST00000305364 C2CD5Q86YS7 1000 aa14.55□□□□□ -0.08
TRIM35-201ENST00000305364 IFNL3Q8IZI9 196 aa14.55□□□□□ -0.08
TRIM35-201ENST00000305364 DCAF5Q96JK2 942 aa14.55□□□□□ -0.08
TRIM35-201ENST00000305364 CCDC43Q96MW1 224 aaKnown RBP14.55□□□□□ -0.08
TRIM35-201ENST00000305364 MAP3K14Q99558 947 aa14.55□□□□□ -0.08
TRIM35-201ENST00000305364 B4DLN1 442 aa14.55□□□□□ -0.08
TRIM35-201ENST00000305364 H7C1D1 291 aa14.55□□□□□ -0.08
TRIM35-201ENST00000305364 EXOC5O00471 708 aa14.55□□□□□ -0.08
TRIM35-201ENST00000305364 HNRNPH1P31943 449 aaKnown RBP14.55□□□□□ -0.08
TRIM35-201ENST00000305364 NAA25Q14CX7 972 aa14.55□□□□□ -0.08
TRIM35-201ENST00000305364 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.55□□□□□ -0.08
TRIM35-201ENST00000305364 PREX1Q8TCU6 1659 aa14.54□□□□□ -0.08
TRIM35-201ENST00000305364 SLC5A1P13866 664 aa14.54□□□□□ -0.08
TRIM35-201ENST00000305364 ERVK-24P63145 666 aa14.54□□□□□ -0.08
TRIM35-201ENST00000305364 ATP2B2Q01814 1243 aa14.54□□□□□ -0.08
TRIM35-201ENST00000305364 NNTQ13423 1086 aa14.54□□□□□ -0.08
TRIM35-201ENST00000305364 PDIA6Q15084 440 aa14.54□□□□□ -0.08
TRIM35-201ENST00000305364 UBXN6Q9BZV1 441 aa14.54□□□□□ -0.08
TRIM35-201ENST00000305364 FAM207AQ9NSI2 230 aaPredicted RBP14.54□□□□□ -0.08
TRIM35-201ENST00000305364 TCP11L1Q9NUJ3 509 aa14.54□□□□□ -0.08
TRIM35-201ENST00000305364 NCAPD2Q15021 1401 aa14.54□□□□□ -0.08
TRIM35-201ENST00000305364 TMCO5BA8MYB1 307 aa14.54□□□□□ -0.08
TRIM35-201ENST00000305364 DNM2P50570 870 aa14.54□□□□□ -0.08
TRIM35-201ENST00000305364 EPHB4P54760 987 aa14.54□□□□□ -0.08
TRIM35-201ENST00000305364 WDR93Q6P2C0 686 aa14.54□□□□□ -0.08
TRIM35-201ENST00000305364 NUP58Q9BVL2 599 aa14.54□□□□□ -0.08
TRIM35-201ENST00000305364 GDAQ9Y2T3 454 aa14.54□□□□□ -0.08
TRIM35-201ENST00000305364 SEMA3EO15041 775 aa14.53□□□□□ -0.08
TRIM35-201ENST00000305364 ADAMTS2O95450 1211 aa14.53□□□□□ -0.08
TRIM35-201ENST00000305364 RPN1P04843 607 aaKnown RBP14.53□□□□□ -0.08
TRIM35-201ENST00000305364 CCDC113Q9H0I3 377 aa14.53□□□□□ -0.08
TRIM35-201ENST00000305364 ABL1P00519 1130 aa14.53□□□□□ -0.08
TRIM35-201ENST00000305364 CLNS1AP54105 237 aaKnown RBP14.53□□□□□ -0.08
TRIM35-201ENST00000305364 PAK2Q13177 524 aa14.53□□□□□ -0.08
TRIM35-201ENST00000305364 MSL1Q68DK7 614 aa14.53□□□□□ -0.08
TRIM35-201ENST00000305364 ZNF579Q8NAF0 562 aaKnown RBP14.53□□□□□ -0.08
TRIM35-201ENST00000305364 LRWD1Q9UFC0 647 aa14.53□□□□□ -0.08
TRIM35-201ENST00000305364 NEDD4P46934 1319 aa14.53□□□□□ -0.08
TRIM35-201ENST00000305364 GTPBP6O43824 516 aaPredicted RBP14.53□□□□□ -0.08
TRIM35-201ENST00000305364 CYP7A1P22680 504 aa14.53□□□□□ -0.08
TRIM35-201ENST00000305364 ADD2P35612 726 aa14.53□□□□□ -0.08
TRIM35-201ENST00000305364 PPARAQ07869 468 aa14.53□□□□□ -0.08
TRIM35-201ENST00000305364 CCNI2Q6ZMN8 369 aaPredicted RBP14.53□□□□□ -0.08
TRIM35-201ENST00000305364 GOPCQ9HD26 462 aa14.53□□□□□ -0.08
TRIM35-201ENST00000305364 RWDD2AQ9UIY3 292 aa14.53□□□□□ -0.08
TRIM35-201ENST00000305364 TRIM49BA6NDI0 452 aa14.52□□□□□ -0.08
TRIM35-201ENST00000305364 CD44P16070 742 aaKnown RBP14.52□□□□□ -0.08
TRIM35-201ENST00000305364 ITGA6P23229 1130 aa14.52□□□□□ -0.08
TRIM35-201ENST00000305364 GUCY2DQ02846 1103 aa14.52□□□□□ -0.08
TRIM35-201ENST00000305364 SLC4A8Q2Y0W8 1093 aa14.52□□□□□ -0.08
TRIM35-201ENST00000305364 DTHD1Q6ZMT9 781 aa14.52□□□□□ -0.08
TRIM35-201ENST00000305364 NHEJ1Q9H9Q4 299 aaPredicted RBP14.52□□□□□ -0.08
TRIM35-201ENST00000305364 AATFQ9NY61 560 aaKnown RBP eCLIP14.52□□□□□ -0.08
TRIM35-201ENST00000305364 HYOU1Q9Y4L1 999 aa14.52□□□□□ -0.08
TRIM35-201ENST00000305364 CDHR2Q9BYE9 1310 aa14.52□□□□□ -0.08
TRIM35-201ENST00000305364 BUB1O43683 1085 aa14.52□□□□□ -0.08
TRIM35-201ENST00000305364 KLHL7Q8IXQ5 586 aa14.52□□□□□ -0.08
TRIM35-201ENST00000305364 EHD4Q9H223 541 aa14.52□□□□□ -0.08
TRIM35-201ENST00000305364 ZHX3Q9H4I2 956 aa14.52□□□□□ -0.08
TRIM35-201ENST00000305364 LY9Q9HBG7 655 aa14.52□□□□□ -0.08
TRIM35-201ENST00000305364 CLGNO14967 610 aa14.52□□□□□ -0.09
TRIM35-201ENST00000305364 ACTN4O43707 911 aaKnown RBP14.52□□□□□ -0.09
TRIM35-201ENST00000305364 TCP1P17987 556 aaKnown RBP14.52□□□□□ -0.09
TRIM35-201ENST00000305364 PDE4DQ08499 809 aa14.52□□□□□ -0.09
TRIM35-201ENST00000305364 CUL4BQ13620 913 aa14.52□□□□□ -0.09
TRIM35-201ENST00000305364 CFAP221Q4G0U5 840 aa14.52□□□□□ -0.09
TRIM35-201ENST00000305364 CRACR2BQ8N4Y2 399 aaPredicted RBP14.52□□□□□ -0.09
TRIM35-201ENST00000305364 SH2D3CQ8N5H7 860 aa14.52□□□□□ -0.09
TRIM35-201ENST00000305364 CEP89Q96ST8 783 aa14.52□□□□□ -0.09
TRIM35-201ENST00000305364 FRMD3A2A2Y4 597 aa14.52□□□□□ -0.09
TRIM35-201ENST00000305364 H7C1W4 665 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms