RNA–Protein interactions for RNA: ENST00000304527.8

SH3D19-201, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SH3D19, Length 5,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-201ENST00000304527 NOP56O00567 594 aaKnown RBP7.05□□□□□ -1.28
SH3D19-201ENST00000304527 BACH1O14867 736 aa7.05□□□□□ -1.28
SH3D19-201ENST00000304527 MMP1P03956 469 aa7.05□□□□□ -1.28
SH3D19-201ENST00000304527 FAM84BQ96KN1 310 aaPredicted RBP7.05□□□□□ -1.28
SH3D19-201ENST00000304527 IMPG2Q9BZV3 1241 aa7.05□□□□□ -1.28
SH3D19-201ENST00000304527 PIM2Q9P1W9 311 aa7.05□□□□□ -1.28
SH3D19-201ENST00000304527 SRP68Q9UHB9 627 aaKnown RBP7.05□□□□□ -1.28
SH3D19-201ENST00000304527 ANAPC4Q9UJX5 808 aa7.05□□□□□ -1.28
SH3D19-201ENST00000304527 COL16A1Q07092 1604 aaPredicted RBP7.04□□□□□ -1.28
SH3D19-201ENST00000304527 KIF28PB7ZC32 967 aa7.04□□□□□ -1.28
SH3D19-201ENST00000304527 USP17L12C9JPN9 530 aa7.04□□□□□ -1.28
SH3D19-201ENST00000304527 USP17L21D6R901 530 aa7.04□□□□□ -1.28
SH3D19-201ENST00000304527 RRP9O43818 475 aaKnown RBP7.04□□□□□ -1.28
SH3D19-201ENST00000304527 C11orf57Q6ZUT1 292 aaPredicted RBP7.04□□□□□ -1.28
SH3D19-201ENST00000304527 TCHPQ9BT92 498 aa7.04□□□□□ -1.28
SH3D19-201ENST00000304527 KCNH3Q9ULD8 1083 aa7.04□□□□□ -1.28
SH3D19-201ENST00000304527 LEMD3Q9Y2U8 911 aa7.04□□□□□ -1.28
SH3D19-201ENST00000304527 NEFHP12036 1026 aa7.04□□□□□ -1.28
SH3D19-201ENST00000304527 OSBPP22059 807 aa7.04□□□□□ -1.28
SH3D19-201ENST00000304527 SNW1Q13573 536 aaKnown RBP7.04□□□□□ -1.28
SH3D19-201ENST00000304527 SPOUT1Q5T280 376 aaKnown RBP7.04□□□□□ -1.28
SH3D19-201ENST00000304527 GJB4Q9NTQ9 266 aa7.04□□□□□ -1.28
SH3D19-201ENST00000304527 AATFQ9NY61 560 aaKnown RBP eCLIP7.04□□□□□ -1.28
SH3D19-201ENST00000304527 SLIT2O94813 1529 aa7.04□□□□□ -1.28
SH3D19-201ENST00000304527 PDS5AQ29RF7 1337 aaKnown RBP7.04□□□□□ -1.28
SH3D19-201ENST00000304527 BTBD18B2RXH4 712 aa7.04□□□□□ -1.28
SH3D19-201ENST00000304527 U2AF2P26368 475 aaKnown RBP eCLIP7.04□□□□□ -1.287e-7■■□□□ 13.2
SH3D19-201ENST00000304527 KCNQ4P56696 695 aa7.04□□□□□ -1.28
SH3D19-201ENST00000304527 DYNLL1P63167 89 aaKnown RBP7.04□□□□□ -1.28
SH3D19-201ENST00000304527 SLC4A8Q2Y0W8 1093 aa7.04□□□□□ -1.28
SH3D19-201ENST00000304527 C2orf69Q8N8R5 385 aa7.04□□□□□ -1.28
SH3D19-201ENST00000304527 ERCC4Q92889 916 aaPredicted RBP7.04□□□□□ -1.28
SH3D19-201ENST00000304527 TEKT1Q969V4 418 aa7.04□□□□□ -1.28
SH3D19-201ENST00000304527 HOMER2Q9NSB8 354 aa7.04□□□□□ -1.28
SH3D19-201ENST00000304527 KCNJ14Q9UNX9 436 aa7.04□□□□□ -1.28
SH3D19-201ENST00000304527 MYH7P12883 1935 aa7.04□□□□□ -1.28
SH3D19-201ENST00000304527 ZEB2O60315 1214 aa7.04□□□□□ -1.28
SH3D19-201ENST00000304527 PHACTR2O75167 634 aa7.04□□□□□ -1.28
SH3D19-201ENST00000304527 PRDM1O75626 825 aa7.04□□□□□ -1.28
SH3D19-201ENST00000304527 SFPQP23246 707 aaKnown RBP eCLIP7.04□□□□□ -1.28
SH3D19-201ENST00000304527 UBA7P41226 1012 aa7.04□□□□□ -1.28
SH3D19-201ENST00000304527 NAPAP54920 295 aa7.04□□□□□ -1.28
SH3D19-201ENST00000304527 SEPT7Q16181 437 aaKnown RBP7.04□□□□□ -1.28
SH3D19-201ENST00000304527 FBXO33Q7Z6M2 555 aa7.04□□□□□ -1.28
SH3D19-201ENST00000304527 PLA2G4DQ86XP0 818 aa7.04□□□□□ -1.28
SH3D19-201ENST00000304527 INCENPQ9NQS7 918 aa7.04□□□□□ -1.28
SH3D19-201ENST00000304527 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.04□□□□□ -1.28
SH3D19-201ENST00000304527 KIF2AO00139 706 aaPredicted RBP7.03□□□□□ -1.28
SH3D19-201ENST00000304527 CALML3P27482 149 aa7.03□□□□□ -1.28
SH3D19-201ENST00000304527 MNS1Q8NEH6 495 aa7.03□□□□□ -1.28
SH3D19-201ENST00000304527 KIAA1524Q8TCG1 905 aa7.03□□□□□ -1.28
SH3D19-201ENST00000304527 SSX2IPQ9Y2D8 614 aa7.03□□□□□ -1.28
SH3D19-201ENST00000304527 GNA11P29992 359 aa7.03□□□□□ -1.28
SH3D19-201ENST00000304527 MYL5Q02045 173 aa7.03□□□□□ -1.28
SH3D19-201ENST00000304527 TXNRD1Q16881 649 aa7.03□□□□□ -1.28
SH3D19-201ENST00000304527 ELMSAN1Q6PJG2 1045 aa7.03□□□□□ -1.28
SH3D19-201ENST00000304527 BPIFA3Q9BQP9 254 aa7.03□□□□□ -1.28
SH3D19-201ENST00000304527 GABBR1Q9UBS5 961 aa7.03□□□□□ -1.28
SH3D19-201ENST00000304527 LRP5O75197 1615 aa7.03□□□□□ -1.28
SH3D19-201ENST00000304527 PLSCR1O15162 318 aa7.03□□□□□ -1.28
SH3D19-201ENST00000304527 MECOMQ03112 1051 aa7.03□□□□□ -1.28
SH3D19-201ENST00000304527 IQCB1Q15051 598 aa7.03□□□□□ -1.28
SH3D19-201ENST00000304527 NTRK3Q16288 839 aa7.03□□□□□ -1.28
SH3D19-201ENST00000304527 MICAL1Q8TDZ2 1067 aa7.03□□□□□ -1.28
SH3D19-201ENST00000304527 SENP2Q9HC62 589 aa7.03□□□□□ -1.28
SH3D19-201ENST00000304527 IMPACTQ9P2X3 320 aa7.03□□□□□ -1.28
SH3D19-201ENST00000304527 XDHP47989 1333 aa7.03□□□□□ -1.28
SH3D19-201ENST00000304527 HMGB1P1B2RPK0 211 aaPredicted RBP7.03□□□□□ -1.28
SH3D19-201ENST00000304527 CCDC172P0C7W6 258 aa7.03□□□□□ -1.28
SH3D19-201ENST00000304527 TAF4BQ92750 862 aa7.03□□□□□ -1.28
SH3D19-201ENST00000304527 AZI2Q9H6S1 392 aa7.03□□□□□ -1.28
SH3D19-201ENST00000304527 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.03□□□□□ -1.28
SH3D19-201ENST00000304527 V9GY48 417 aaPredicted RBP7.03□□□□□ -1.28
SH3D19-201ENST00000304527 PRPF3O43395 683 aaKnown RBP7.02□□□□□ -1.29
SH3D19-201ENST00000304527 ORC4O43929 436 aa7.02□□□□□ -1.29
SH3D19-201ENST00000304527 GRAPQ13588 217 aa7.02□□□□□ -1.29
SH3D19-201ENST00000304527 CFAP100Q494V2 611 aa7.02□□□□□ -1.29
SH3D19-201ENST00000304527 RESP18Q5W5W9 173 aa7.02□□□□□ -1.29
SH3D19-201ENST00000304527 KRBA2Q6ZNG9 492 aa7.02□□□□□ -1.29
SH3D19-201ENST00000304527 TRMT1LQ7Z2T5 733 aaKnown RBP7.02□□□□□ -1.29
SH3D19-201ENST00000304527 CCDC24Q8N4L8 307 aa7.02□□□□□ -1.29
SH3D19-201ENST00000304527 GRAPLQ8TC17 118 aaPredicted RBP7.02□□□□□ -1.29
SH3D19-201ENST00000304527 RIOK1Q9BRS2 568 aaKnown RBP7.02□□□□□ -1.29
SH3D19-201ENST00000304527 SPTLC3Q9NUV7 552 aa7.02□□□□□ -1.29
SH3D19-201ENST00000304527 KRT13P13646 458 aa7.02□□□□□ -1.29
SH3D19-201ENST00000304527 NPR1P16066 1061 aa7.02□□□□□ -1.29
SH3D19-201ENST00000304527 HOXD10P28358 340 aa7.02□□□□□ -1.29
SH3D19-201ENST00000304527 IREB2P48200 963 aaKnown RBP7.02□□□□□ -1.29
SH3D19-201ENST00000304527 C9orf131Q5VYM1 1079 aa7.02□□□□□ -1.29
SH3D19-201ENST00000304527 TMC6Q7Z403 805 aa7.02□□□□□ -1.29
SH3D19-201ENST00000304527 HEATR3Q7Z4Q2 680 aa7.02□□□□□ -1.29
SH3D19-201ENST00000304527 FAM114A1Q8IWE2 563 aa7.02□□□□□ -1.29
SH3D19-201ENST00000304527 ARHGEF1Q92888 912 aaKnown RBP7.02□□□□□ -1.29
SH3D19-201ENST00000304527 NSUN4Q96CB9 384 aaKnown RBP7.02□□□□□ -1.29
SH3D19-201ENST00000304527 IKBKBO14920 756 aa7.02□□□□□ -1.29
SH3D19-201ENST00000304527 PARP1P09874 1014 aaKnown RBP7.02□□□□□ -1.29
SH3D19-201ENST00000304527 SKILP12757 684 aa7.02□□□□□ -1.29
SH3D19-201ENST00000304527 CNGA1P29973 690 aa7.02□□□□□ -1.29
SH3D19-201ENST00000304527 DPCR1Q3MIW9 517 aa7.02□□□□□ -1.29
SH3D19-201ENST00000304527 GADL1Q6ZQY3 521 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms