RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 CIAPIN1Q6FI81 312 aa16.62■□□□□ 0.25
SHCBP1-201ENST00000303383 PIK3AP1Q6ZUJ8 805 aa16.62■□□□□ 0.25
SHCBP1-201ENST00000303383 RASGRP2Q7LDG7 609 aa16.62■□□□□ 0.25
SHCBP1-201ENST00000303383 SPZ1Q9BXG8 430 aa16.62■□□□□ 0.25
SHCBP1-201ENST00000303383 UBA5Q9GZZ9 404 aa16.62■□□□□ 0.25
SHCBP1-201ENST00000303383 GPCPD1Q9NPB8 672 aa16.62■□□□□ 0.25
SHCBP1-201ENST00000303383 FAM13BQ9NYF5 915 aa16.62■□□□□ 0.25
SHCBP1-201ENST00000303383 CCDC194A0A1B0GVG4 234 aa16.62■□□□□ 0.25
SHCBP1-201ENST00000303383 SPDYE2BA6NHP3 402 aa16.62■□□□□ 0.25
SHCBP1-201ENST00000303383 SPDYE6P0CI01 402 aa16.62■□□□□ 0.25
SHCBP1-201ENST00000303383 BLIDQ8IZY5 108 aa16.62■□□□□ 0.25
SHCBP1-201ENST00000303383 BMP15O95972 392 aa16.62■□□□□ 0.25
SHCBP1-201ENST00000303383 PFKFB1P16118 471 aa16.62■□□□□ 0.25
SHCBP1-201ENST00000303383 CLIC6Q96NY7 704 aa16.62■□□□□ 0.25
SHCBP1-201ENST00000303383 PDHBP11177 359 aa16.61■□□□□ 0.25
SHCBP1-201ENST00000303383 TOB1P50616 345 aaPredicted RBP16.61■□□□□ 0.25
SHCBP1-201ENST00000303383 SNW1Q13573 536 aaKnown RBP16.61■□□□□ 0.25
SHCBP1-201ENST00000303383 AGBL3Q8NEM8 1001 aa16.61■□□□□ 0.25
SHCBP1-201ENST00000303383 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.61■□□□□ 0.25
SHCBP1-201ENST00000303383 ZNF202O95125 648 aa16.61■□□□□ 0.25
SHCBP1-201ENST00000303383 SLURP2P0DP57 97 aa16.61■□□□□ 0.25
SHCBP1-201ENST00000303383 UVSSAQ2YD98 709 aa16.61■□□□□ 0.25
SHCBP1-201ENST00000303383 AXDND1Q5T1B0 1012 aaPredicted RBP16.61■□□□□ 0.25
SHCBP1-201ENST00000303383 FMR1NBQ8N0W7 255 aaPredicted RBP16.61■□□□□ 0.25
SHCBP1-201ENST00000303383 ENGASEQ8NFI3 743 aa16.61■□□□□ 0.25
SHCBP1-201ENST00000303383 KANSL2Q9H9L4 492 aa16.61■□□□□ 0.25
SHCBP1-201ENST00000303383 FAM205CA6NFA0 338 aa16.61■□□□□ 0.25
SHCBP1-201ENST00000303383 TNIP1Q15025 636 aa16.61■□□□□ 0.25
SHCBP1-201ENST00000303383 ABCB5Q2M3G0 1257 aa16.61■□□□□ 0.25
SHCBP1-201ENST00000303383 TTC38Q5R3I4 469 aa16.61■□□□□ 0.25
SHCBP1-201ENST00000303383 PCDHA4Q9UN74 947 aa16.61■□□□□ 0.25
SHCBP1-201ENST00000303383 CYTH3O43739 400 aa16.6■□□□□ 0.25
SHCBP1-201ENST00000303383 GDF11O95390 407 aa16.6■□□□□ 0.25
SHCBP1-201ENST00000303383 VEGFAP15692 232 aaPredicted RBP16.6■□□□□ 0.25
SHCBP1-201ENST00000303383 CXCL9Q07325 125 aa16.6■□□□□ 0.25
SHCBP1-201ENST00000303383 ZNF174Q15697 407 aa16.6■□□□□ 0.25
SHCBP1-201ENST00000303383 RBM26Q5T8P6 1007 aaKnown RBP16.6■□□□□ 0.25
SHCBP1-201ENST00000303383 WWC2Q6AWC2 1192 aa16.6■□□□□ 0.25
SHCBP1-201ENST00000303383 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.6■□□□□ 0.25
SHCBP1-201ENST00000303383 ZNF70Q9UC06 446 aaPredicted RBP16.6■□□□□ 0.25
SHCBP1-201ENST00000303383 CD2APQ9Y5K6 639 aa16.6■□□□□ 0.25
SHCBP1-201ENST00000303383 ANO6Q4KMQ2 910 aa16.6■□□□□ 0.25
SHCBP1-201ENST00000303383 SHISA4Q96DD7 197 aa16.6■□□□□ 0.25
SHCBP1-201ENST00000303383 BARHL2Q9NY43 387 aa16.6■□□□□ 0.25
SHCBP1-201ENST00000303383 ICA1Q05084 483 aa16.6■□□□□ 0.25
SHCBP1-201ENST00000303383 GALNT17Q6IS24 598 aa16.6■□□□□ 0.25
SHCBP1-201ENST00000303383 PIGSQ96S52 555 aa16.6■□□□□ 0.25
SHCBP1-201ENST00000303383 FUCA2Q9BTY2 467 aa16.6■□□□□ 0.25
SHCBP1-201ENST00000303383 C6orf50Q9HD87 102 aa16.6■□□□□ 0.25
SHCBP1-201ENST00000303383 TMEM179Q6ZVK1 233 aa16.59■□□□□ 0.25
SHCBP1-201ENST00000303383 SH3BP5LQ7L8J4 393 aa16.59■□□□□ 0.25
SHCBP1-201ENST00000303383 FAM200AQ8TCP9 573 aa16.59■□□□□ 0.25
SHCBP1-201ENST00000303383 IGKV6D-41A0A0C4DH26 115 aa16.59■□□□□ 0.25
SHCBP1-201ENST00000303383 SMARCA1P28370 1054 aa16.59■□□□□ 0.25
SHCBP1-201ENST00000303383 GNA11P29992 359 aa16.59■□□□□ 0.25
SHCBP1-201ENST00000303383 SPECC1Q5M775 1068 aa16.59■□□□□ 0.25
SHCBP1-201ENST00000303383 GPATCH4Q5T3I0 446 aaKnown RBP16.59■□□□□ 0.25
SHCBP1-201ENST00000303383 DNAJC18Q9H819 358 aa16.59■□□□□ 0.25
SHCBP1-201ENST00000303383 HOOK1Q9UJC3 728 aaKnown RBP16.58■□□□□ 0.25
SHCBP1-201ENST00000303383 EEF2P13639 858 aaKnown RBP16.58■□□□□ 0.24
SHCBP1-201ENST00000303383 IKQ13123 557 aaPredicted RBP16.58■□□□□ 0.24
SHCBP1-201ENST00000303383 SEPT2Q15019 361 aa16.58■□□□□ 0.24
SHCBP1-201ENST00000303383 STX1AQ16623 288 aa16.58■□□□□ 0.24
SHCBP1-201ENST00000303383 EARS2Q5JPH6 523 aaKnown RBP16.58■□□□□ 0.24
SHCBP1-201ENST00000303383 RBM43Q6ZSC3 357 aaKnown RBP16.58■□□□□ 0.24
SHCBP1-201ENST00000303383 GMLQ99445 158 aa16.58■□□□□ 0.24
SHCBP1-201ENST00000303383 KCNH3Q9ULD8 1083 aa16.58■□□□□ 0.24
SHCBP1-201ENST00000303383 MRVI1Q9Y6F6 885 aa16.58■□□□□ 0.24
SHCBP1-201ENST00000303383 SLC1A4P43007 532 aa16.58■□□□□ 0.24
SHCBP1-201ENST00000303383 TRAPPC10P48553 1259 aa16.58■□□□□ 0.24
SHCBP1-201ENST00000303383 NOVP48745 357 aa16.58■□□□□ 0.24
SHCBP1-201ENST00000303383 SHC4Q6S5L8 630 aa16.58■□□□□ 0.24
SHCBP1-201ENST00000303383 CCDC34Q96HJ3 373 aa16.58■□□□□ 0.24
SHCBP1-201ENST00000303383 GOLGB1Q14789 3259 aaKnown RBP16.57■□□□□ 0.24
SHCBP1-201ENST00000303383 SMCO2A6NFE2 343 aa16.57■□□□□ 0.24
SHCBP1-201ENST00000303383 STXBP3O00186 592 aa16.57■□□□□ 0.24
SHCBP1-201ENST00000303383 PTMAP06454 111 aaKnown RBP16.57■□□□□ 0.24
SHCBP1-201ENST00000303383 PTPREP23469 700 aa16.57■□□□□ 0.24
SHCBP1-201ENST00000303383 MCM7P33993 719 aa16.57■□□□□ 0.24
SHCBP1-201ENST00000303383 RESP18Q5W5W9 173 aa16.57■□□□□ 0.24
SHCBP1-201ENST00000303383 CNNM3Q8NE01 707 aa16.57■□□□□ 0.24
SHCBP1-201ENST00000303383 RASGRP4Q8TDF6 673 aa16.57■□□□□ 0.24
SHCBP1-201ENST00000303383 FAM151AQ8WW52 585 aa16.57■□□□□ 0.24
SHCBP1-201ENST00000303383 DNAJC25Q9H1X3 360 aa16.57■□□□□ 0.24
SHCBP1-201ENST00000303383 ANO10Q9NW15 660 aa16.57■□□□□ 0.24
SHCBP1-201ENST00000303383 HERC5Q9UII4 1024 aaKnown RBP16.57■□□□□ 0.24
SHCBP1-201ENST00000303383 ZNF543Q08ER8 600 aa16.57■□□□□ 0.24
SHCBP1-201ENST00000303383 KCTD1Q719H9 257 aa16.57■□□□□ 0.24
SHCBP1-201ENST00000303383 SRPRBQ9Y5M8 271 aaKnown RBP16.57■□□□□ 0.24
SHCBP1-201ENST00000303383 GJA3Q9Y6H8 435 aa16.57■□□□□ 0.24
SHCBP1-201ENST00000303383 ZNF165P49910 485 aa16.57■□□□□ 0.24
SHCBP1-201ENST00000303383 ERCC4Q92889 916 aaPredicted RBP16.57■□□□□ 0.24
SHCBP1-201ENST00000303383 NYAP2Q9P242 653 aa16.57■□□□□ 0.24
SHCBP1-201ENST00000303383 USP25Q9UHP3 1055 aa16.57■□□□□ 0.24
SHCBP1-201ENST00000303383 GOLGA6L19H0YKK7 550 aa16.56■□□□□ 0.24
SHCBP1-201ENST00000303383 CAVIN2O95810 425 aa16.56■□□□□ 0.24
SHCBP1-201ENST00000303383 GH2P01242 217 aa16.56■□□□□ 0.24
SHCBP1-201ENST00000303383 NPY5RQ15761 445 aa16.56■□□□□ 0.24
SHCBP1-201ENST00000303383 SLFN13Q68D06 897 aa16.56■□□□□ 0.24
SHCBP1-201ENST00000303383 FAM177A1Q8N128 213 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms