RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 OGFOD1Q8N543 542 aa12.15□□□□□ -0.46
CLP1-201ENST00000302731 MKL1Q969V6 931 aa12.15□□□□□ -0.46
CLP1-201ENST00000302731 PRMT6Q96LA8 375 aaPredicted RBP12.15□□□□□ -0.46
CLP1-201ENST00000302731 DNAJC18Q9H819 358 aa12.15□□□□□ -0.46
CLP1-201ENST00000302731 TMOD2Q9NZR1 351 aa12.15□□□□□ -0.46
CLP1-201ENST00000302731 FBXO2Q9UK22 296 aaPredicted RBP12.15□□□□□ -0.46
CLP1-201ENST00000302731 PCDHB6Q9Y5E3 794 aa12.15□□□□□ -0.46
CLP1-201ENST00000302731 PCDHAC2Q9Y5I4 1007 aa12.15□□□□□ -0.46
CLP1-201ENST00000302731 CD2APQ9Y5K6 639 aa12.15□□□□□ -0.46
CLP1-201ENST00000302731 COL4A5P29400 1685 aa12.15□□□□□ -0.46
CLP1-201ENST00000302731 DDTLA6NHG4 134 aaPredicted RBP12.15□□□□□ -0.47
CLP1-201ENST00000302731 SYKP43405 635 aa12.15□□□□□ -0.47
CLP1-201ENST00000302731 GPATCH4Q5T3I0 446 aaKnown RBP12.15□□□□□ -0.47
CLP1-201ENST00000302731 USP17L2Q6R6M4 530 aa12.15□□□□□ -0.47
CLP1-201ENST00000302731 SH3BP5LQ7L8J4 393 aa12.15□□□□□ -0.47
CLP1-201ENST00000302731 RRP36Q96EU6 259 aaKnown RBP12.15□□□□□ -0.47
CLP1-201ENST00000302731 SDF4Q9BRK5 362 aa12.15□□□□□ -0.47
CLP1-201ENST00000302731 TRIM34Q9BYJ4 488 aa12.15□□□□□ -0.47
CLP1-201ENST00000302731 ZMYND12Q9H0C1 365 aa12.15□□□□□ -0.47
CLP1-201ENST00000302731 TDRD3Q9H7E2 651 aaKnown RBP12.15□□□□□ -0.47
CLP1-201ENST00000302731 KANSL2Q9H9L4 492 aa12.15□□□□□ -0.47
CLP1-201ENST00000302731 NYAP2Q9P242 653 aa12.15□□□□□ -0.47
CLP1-201ENST00000302731 HERC5Q9UII4 1024 aaKnown RBP12.15□□□□□ -0.47
CLP1-201ENST00000302731 FER1L6Q2WGJ9 1857 aa12.14□□□□□ -0.47
CLP1-201ENST00000302731 ESYT2A0FGR8 921 aa12.14□□□□□ -0.47
CLP1-201ENST00000302731 M0R2N6 131 aa12.14□□□□□ -0.47
CLP1-201ENST00000302731 STXBP3O00186 592 aa12.14□□□□□ -0.47
CLP1-201ENST00000302731 RAD17O75943 681 aa12.14□□□□□ -0.47
CLP1-201ENST00000302731 VEGFAP15692 232 aaPredicted RBP12.14□□□□□ -0.47
CLP1-201ENST00000302731 CACNB3P54284 484 aa12.14□□□□□ -0.47
CLP1-201ENST00000302731 TCP10Q12799 353 aa12.14□□□□□ -0.47
CLP1-201ENST00000302731 DLGAP5Q15398 846 aa12.14□□□□□ -0.47
CLP1-201ENST00000302731 STX1AQ16623 288 aa12.14□□□□□ -0.47
CLP1-201ENST00000302731 CERKLQ49MI3 558 aaPredicted RBP12.14□□□□□ -0.47
CLP1-201ENST00000302731 HS1BP3Q53T59 392 aa12.14□□□□□ -0.47
CLP1-201ENST00000302731 WWC2Q6AWC2 1192 aa12.14□□□□□ -0.47
CLP1-201ENST00000302731 TMEM179Q6ZVK1 233 aa12.14□□□□□ -0.47
CLP1-201ENST00000302731 ZSCAN29Q8IWY8 852 aaPredicted RBP12.14□□□□□ -0.47
CLP1-201ENST00000302731 FERMT2Q96AC1 680 aa12.14□□□□□ -0.47
CLP1-201ENST00000302731 SGIP1Q9BQI5 828 aa12.14□□□□□ -0.47
CLP1-201ENST00000302731 TAOK3Q9H2K8 898 aa12.14□□□□□ -0.47
CLP1-201ENST00000302731 FAM13BQ9NYF5 915 aa12.14□□□□□ -0.47
CLP1-201ENST00000302731 CLIP2Q9UDT6 1046 aa12.14□□□□□ -0.47
CLP1-201ENST00000302731 SEC63Q9UGP8 760 aaKnown RBP12.14□□□□□ -0.47
CLP1-201ENST00000302731 SYNPO2Q9UMS6 1093 aa12.14□□□□□ -0.47
CLP1-201ENST00000302731 LTBP3Q9NS15 1303 aa12.13□□□□□ -0.47
CLP1-201ENST00000302731 USP17L5A8MUK1 530 aa12.13□□□□□ -0.47
CLP1-201ENST00000302731 GOLGA8HP0CJ92 632 aa12.13□□□□□ -0.47
CLP1-201ENST00000302731 GNA11P29992 359 aa12.13□□□□□ -0.47
CLP1-201ENST00000302731 ZNF543Q08ER8 600 aa12.13□□□□□ -0.47
CLP1-201ENST00000302731 ANO6Q4KMQ2 910 aa12.13□□□□□ -0.47
CLP1-201ENST00000302731 EARS2Q5JPH6 523 aaKnown RBP12.13□□□□□ -0.47
CLP1-201ENST00000302731 TTC38Q5R3I4 469 aa12.13□□□□□ -0.47
CLP1-201ENST00000302731 FAM151AQ8WW52 585 aa12.13□□□□□ -0.47
CLP1-201ENST00000302731 TRIM44Q96DX7 344 aaPredicted RBP12.13□□□□□ -0.47
CLP1-201ENST00000302731 ANO10Q9NW15 660 aa12.13□□□□□ -0.47
CLP1-201ENST00000302731 KIAA1468Q9P260 1216 aa12.13□□□□□ -0.47
CLP1-201ENST00000302731 ATF5Q9Y2D1 282 aaPredicted RBP12.13□□□□□ -0.47
CLP1-201ENST00000302731 MPHOSPH10O00566 681 aaKnown RBP12.12□□□□□ -0.47
CLP1-201ENST00000302731 ATP2C1P98194 919 aaPredicted RBP12.12□□□□□ -0.47
CLP1-201ENST00000302731 SPDYE2Q495Y8 402 aa12.12□□□□□ -0.47
CLP1-201ENST00000302731 TYW1BQ6NUM6 668 aa12.12□□□□□ -0.47
CLP1-201ENST00000302731 HEATR3Q7Z4Q2 680 aa12.12□□□□□ -0.47
CLP1-201ENST00000302731 LRRC47Q8N1G4 583 aaKnown RBP12.12□□□□□ -0.47
CLP1-201ENST00000302731 JDP2Q8WYK2 163 aa12.12□□□□□ -0.47
CLP1-201ENST00000302731 GPKOWQ92917 476 aaPredicted RBP eCLIP12.12□□□□□ -0.47
CLP1-201ENST00000302731 KCNH3Q9ULD8 1083 aa12.12□□□□□ -0.47
CLP1-201ENST00000302731 BAZ2BQ9UIF8 2168 aaKnown RBP12.12□□□□□ -0.47
CLP1-201ENST00000302731 FAM205CA6NFA0 338 aa12.11□□□□□ -0.47
CLP1-201ENST00000302731 CXCL9Q07325 125 aa12.11□□□□□ -0.47
CLP1-201ENST00000302731 ARL6IP4Q66PJ3 421 aaKnown RBP12.11□□□□□ -0.47
CLP1-201ENST00000302731 CIAPIN1Q6FI81 312 aa12.11□□□□□ -0.47
CLP1-201ENST00000302731 PPP1R18Q6NYC8 613 aa12.11□□□□□ -0.47
CLP1-201ENST00000302731 PIK3AP1Q6ZUJ8 805 aa12.11□□□□□ -0.47
CLP1-201ENST00000302731 FAM83AQ86UY5 434 aa12.11□□□□□ -0.47
CLP1-201ENST00000302731 DCAF4Q8WV16 495 aa12.11□□□□□ -0.47
CLP1-201ENST00000302731 PIBF1Q8WXW3 757 aa12.11□□□□□ -0.47
CLP1-201ENST00000302731 ZBED3Q96IU2 234 aaPredicted RBP12.11□□□□□ -0.47
CLP1-201ENST00000302731 CLIC6Q96NY7 704 aa12.11□□□□□ -0.47
CLP1-201ENST00000302731 C6orf50Q9HD87 102 aa12.11□□□□□ -0.47
CLP1-201ENST00000302731 ZNF70Q9UC06 446 aaPredicted RBP12.11□□□□□ -0.47
CLP1-201ENST00000302731 HOOK1Q9UJC3 728 aaKnown RBP12.11□□□□□ -0.47
CLP1-201ENST00000302731 MTMR7Q9Y216 660 aa12.11□□□□□ -0.47
CLP1-201ENST00000302731 MYH4Q9Y623 1939 aa12.11□□□□□ -0.47
CLP1-201ENST00000302731 CCDC194A0A1B0GVG4 234 aa12.11□□□□□ -0.47
CLP1-201ENST00000302731 TBC1D12O60347 775 aa12.11□□□□□ -0.47
CLP1-201ENST00000302731 RPS12P25398 132 aaKnown RBP12.11□□□□□ -0.47
CLP1-201ENST00000302731 ZNF165P49910 485 aa12.11□□□□□ -0.47
CLP1-201ENST00000302731 NAPAP54920 295 aa12.11□□□□□ -0.47
CLP1-201ENST00000302731 ORC2Q13416 577 aaPredicted RBP12.11□□□□□ -0.47
CLP1-201ENST00000302731 TNIP1Q15025 636 aa12.11□□□□□ -0.47
CLP1-201ENST00000302731 ABCB5Q2M3G0 1257 aa12.11□□□□□ -0.47
CLP1-201ENST00000302731 KRT25Q7Z3Z0 450 aa12.11□□□□□ -0.47
CLP1-201ENST00000302731 GMCL1P1Q8NEA9 526 aa12.11□□□□□ -0.47
CLP1-201ENST00000302731 MTMR8Q96EF0 704 aa12.11□□□□□ -0.47
CLP1-201ENST00000302731 PIGSQ96S52 555 aa12.11□□□□□ -0.47
CLP1-201ENST00000302731 CSRNP1Q96S65 589 aa12.11□□□□□ -0.47
CLP1-201ENST00000302731 NAT10Q9H0A0 1025 aaKnown RBP12.11□□□□□ -0.47
CLP1-201ENST00000302731 PCDHA6Q9UN73 950 aa12.11□□□□□ -0.47
CLP1-201ENST00000302731 PCDHA8Q9Y5H6 950 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms