RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 KLRC3Q07444 240 aa13.41□□□□□ -0.26
CLCC1-201ENST00000302500 TMEM132BQ14DG7 1078 aa13.41□□□□□ -0.26
CLCC1-201ENST00000302500 RCSD1Q6JBY9 416 aa13.41□□□□□ -0.26
CLCC1-201ENST00000302500 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.41□□□□□ -0.26
CLCC1-201ENST00000302500 RASGRP2Q7LDG7 609 aa13.41□□□□□ -0.26
CLCC1-201ENST00000302500 NBPF11Q86T75 865 aa13.41□□□□□ -0.26
CLCC1-201ENST00000302500 AMOTL1Q8IY63 956 aa13.41□□□□□ -0.26
CLCC1-201ENST00000302500 STK11IPQ8N1F8 1099 aa13.41□□□□□ -0.26
CLCC1-201ENST00000302500 GMCL1P1Q8NEA9 526 aa13.41□□□□□ -0.26
CLCC1-201ENST00000302500 RAET1EQ8TD07 263 aa13.41□□□□□ -0.26
CLCC1-201ENST00000302500 UNC93B1Q9H1C4 597 aa13.41□□□□□ -0.26
CLCC1-201ENST00000302500 FLRT1Q9NZU1 646 aa13.41□□□□□ -0.26
CLCC1-201ENST00000302500 NMT2O60551 498 aa13.4□□□□□ -0.26
CLCC1-201ENST00000302500 PTPREP23469 700 aa13.4□□□□□ -0.26
CLCC1-201ENST00000302500 CCL14Q16627 93 aa13.4□□□□□ -0.26
CLCC1-201ENST00000302500 FAM47AQ5JRC9 791 aa13.4□□□□□ -0.26
CLCC1-201ENST00000302500 SHCBP1Q8NEM2 672 aa13.4□□□□□ -0.26
CLCC1-201ENST00000302500 SOCS4Q8WXH5 440 aa13.4□□□□□ -0.26
CLCC1-201ENST00000302500 COA7Q96BR5 231 aa13.4□□□□□ -0.26
CLCC1-201ENST00000302500 NUP88Q99567 741 aaPredicted RBP13.4□□□□□ -0.26
CLCC1-201ENST00000302500 PAGR1Q9BTK6 254 aa13.4□□□□□ -0.26
CLCC1-201ENST00000302500 NACAP1Q9BZK3 213 aa13.4□□□□□ -0.26
CLCC1-201ENST00000302500 SPATC1LQ9H0A9 340 aa13.4□□□□□ -0.26
CLCC1-201ENST00000302500 SH2D4AQ9H788 454 aa13.4□□□□□ -0.26
CLCC1-201ENST00000302500 HOXC10Q9NYD6 342 aa13.4□□□□□ -0.26
CLCC1-201ENST00000302500 PPP1R9AQ9ULJ8 1098 aa13.4□□□□□ -0.26
CLCC1-201ENST00000302500 LRRC37A2A6NM11 1700 aa13.4□□□□□ -0.26
CLCC1-201ENST00000302500 VWA5AO00534 786 aa13.39□□□□□ -0.27
CLCC1-201ENST00000302500 ATP2A1O14983 1001 aa13.39□□□□□ -0.27
CLCC1-201ENST00000302500 APPP05067 770 aa13.39□□□□□ -0.27
CLCC1-201ENST00000302500 TFAP4Q01664 338 aa13.39□□□□□ -0.27
CLCC1-201ENST00000302500 FAM83BQ5T0W9 1011 aa13.39□□□□□ -0.27
CLCC1-201ENST00000302500 PLEKHH3Q7Z736 793 aa13.39□□□□□ -0.27
CLCC1-201ENST00000302500 MB21D1Q8N884 522 aa13.39□□□□□ -0.27
CLCC1-201ENST00000302500 STAG1Q8WVM7 1258 aa13.39□□□□□ -0.27
CLCC1-201ENST00000302500 RILPL2Q969X0 211 aa13.39□□□□□ -0.27
CLCC1-201ENST00000302500 MKNK2Q9HBH9 465 aa13.39□□□□□ -0.27
CLCC1-201ENST00000302500 TCP11L1Q9NUJ3 509 aa13.39□□□□□ -0.27
CLCC1-201ENST00000302500 NEDD4P46934 1319 aa13.39□□□□□ -0.27
CLCC1-201ENST00000302500 TRIM6-TRIM34B2RNG4 842 aa13.39□□□□□ -0.27
CLCC1-201ENST00000302500 FLOT1O75955 427 aa13.39□□□□□ -0.27
CLCC1-201ENST00000302500 TTLL1O95922 423 aa13.39□□□□□ -0.27
CLCC1-201ENST00000302500 HMGCRP04035 888 aa13.39□□□□□ -0.27
CLCC1-201ENST00000302500 PDE4BQ07343 736 aa13.39□□□□□ -0.27
CLCC1-201ENST00000302500 MAP2K5Q13163 448 aa13.39□□□□□ -0.27
CLCC1-201ENST00000302500 SKAP1Q86WV1 359 aa13.39□□□□□ -0.27
CLCC1-201ENST00000302500 NPLOC4Q8TAT6 608 aa13.39□□□□□ -0.27
CLCC1-201ENST00000302500 GMCL1Q96IK5 515 aa13.39□□□□□ -0.27
CLCC1-201ENST00000302500 DSCC1Q9BVC3 393 aa13.39□□□□□ -0.27
CLCC1-201ENST00000302500 TANGO6Q9C0B7 1094 aa13.39□□□□□ -0.27
CLCC1-201ENST00000302500 CLIP2Q9UDT6 1046 aa13.39□□□□□ -0.27
CLCC1-201ENST00000302500 MCM3APO60318 1980 aa13.38□□□□□ -0.27
CLCC1-201ENST00000302500 ZNF536O15090 1300 aa13.38□□□□□ -0.27
CLCC1-201ENST00000302500 SLC15A5A6NIM6 579 aa13.38□□□□□ -0.27
CLCC1-201ENST00000302500 COBLO75128 1261 aa13.38□□□□□ -0.27
CLCC1-201ENST00000302500 MYCNP04198 464 aaPredicted RBP13.38□□□□□ -0.27
CLCC1-201ENST00000302500 SNHG28P0DPA3 235 aa13.38□□□□□ -0.27
CLCC1-201ENST00000302500 ERCC3P19447 782 aa13.38□□□□□ -0.27
CLCC1-201ENST00000302500 CHMLP26374 656 aa13.38□□□□□ -0.27
CLCC1-201ENST00000302500 CWC27Q6UX04 472 aaKnown RBP13.38□□□□□ -0.27
CLCC1-201ENST00000302500 RIOX2Q8IUF8 465 aa13.38□□□□□ -0.27
CLCC1-201ENST00000302500 ZNF444Q8N0Y2 327 aaPredicted RBP13.38□□□□□ -0.27
CLCC1-201ENST00000302500 LRRC47Q8N1G4 583 aaKnown RBP13.38□□□□□ -0.27
CLCC1-201ENST00000302500 U2AF1L4Q8WU68 220 aaKnown RBP13.38□□□□□ -0.27
CLCC1-201ENST00000302500 APBA2Q99767 749 aa13.38□□□□□ -0.27
CLCC1-201ENST00000302500 NUDT12Q9BQG2 462 aa13.38□□□□□ -0.27
CLCC1-201ENST00000302500 ZNF287Q9HBT7 754 aa13.38□□□□□ -0.27
CLCC1-201ENST00000302500 GOPCQ9HD26 462 aa13.38□□□□□ -0.27
CLCC1-201ENST00000302500 ZBTB47Q9UFB7 747 aaPredicted RBP13.38□□□□□ -0.27
CLCC1-201ENST00000302500 RIPK3Q9Y572 518 aa13.38□□□□□ -0.27
CLCC1-201ENST00000302500 PLA2G6O60733 806 aa13.37□□□□□ -0.27
CLCC1-201ENST00000302500 SGPL1O95470 568 aa13.37□□□□□ -0.27
CLCC1-201ENST00000302500 CACNB2Q08289 660 aaPredicted RBP13.37□□□□□ -0.27
CLCC1-201ENST00000302500 LHX8Q68G74 356 aa13.37□□□□□ -0.27
CLCC1-201ENST00000302500 ABRAQ8N0Z2 381 aa13.37□□□□□ -0.27
CLCC1-201ENST00000302500 TRPV1Q8NER1 839 aa13.37□□□□□ -0.27
CLCC1-201ENST00000302500 FGD4Q96M96 766 aa13.37□□□□□ -0.27
CLCC1-201ENST00000302500 SLC38A10Q9HBR0 1119 aa13.37□□□□□ -0.27
CLCC1-201ENST00000302500 TAF6LQ9Y6J9 622 aa13.37□□□□□ -0.27
CLCC1-201ENST00000302500 RPTORQ8N122 1335 aa13.36□□□□□ -0.27
CLCC1-201ENST00000302500 LAMA2P24043 3122 aaKnown RBP13.36□□□□□ -0.27
CLCC1-201ENST00000302500 DNAJC25-GNG10A0A024R161 153 aa13.36□□□□□ -0.27
CLCC1-201ENST00000302500 MYCP01106 439 aaPredicted RBP13.36□□□□□ -0.27
CLCC1-201ENST00000302500 TSPY3P0CV98 308 aa13.36□□□□□ -0.27
CLCC1-201ENST00000302500 TSPY8P0CW00 308 aa13.36□□□□□ -0.27
CLCC1-201ENST00000302500 PCP11498 1178 aaKnown RBP13.36□□□□□ -0.27
CLCC1-201ENST00000302500 CYP2B6P20813 491 aa13.36□□□□□ -0.27
CLCC1-201ENST00000302500 HAND2P61296 217 aa13.36□□□□□ -0.27
CLCC1-201ENST00000302500 AKNAD1Q5T1N1 836 aa13.36□□□□□ -0.27
CLCC1-201ENST00000302500 ANKS1AQ92625 1134 aa13.36□□□□□ -0.27
CLCC1-201ENST00000302500 SLF1Q9BQI6 1058 aa13.36□□□□□ -0.27
CLCC1-201ENST00000302500 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.36□□□□□ -0.27
CLCC1-201ENST00000302500 RNF208Q9H0X6 261 aa13.36□□□□□ -0.27
CLCC1-201ENST00000302500 RAD50Q92878 1312 aa13.35□□□□□ -0.27
CLCC1-201ENST00000302500 HIP1O00291 1037 aa13.35□□□□□ -0.27
CLCC1-201ENST00000302500 SGSM2O43147 1006 aa13.35□□□□□ -0.27
CLCC1-201ENST00000302500 STRNO43815 780 aa13.35□□□□□ -0.27
CLCC1-201ENST00000302500 ADORA2AP29274 412 aa13.35□□□□□ -0.27
CLCC1-201ENST00000302500 RGS2P41220 211 aa13.35□□□□□ -0.27
CLCC1-201ENST00000302500 UBXN2AP68543 259 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms