RNA–Protein interactions for RNA: ENST00000302424.11

TRIM8-201, Transcript of tripartite motif containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM8, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-201ENST00000302424 KRT31Q15323 416 aa20.37■□□□□ 0.85
TRIM8-201ENST00000302424 TMCO3Q6UWJ1 677 aa20.37■□□□□ 0.85
TRIM8-201ENST00000302424 TRIML1Q8N9V2 468 aa20.37■□□□□ 0.85
TRIM8-201ENST00000302424 IL17RBQ9NRM6 502 aa20.37■□□□□ 0.85
TRIM8-201ENST00000302424 STX8Q9UNK0 236 aa20.37■□□□□ 0.85
TRIM8-201ENST00000302424 SASH3O75995 380 aa20.36■□□□□ 0.85
TRIM8-201ENST00000302424 GYS2P54840 703 aa20.36■□□□□ 0.85
TRIM8-201ENST00000302424 ATP2C1P98194 919 aaPredicted RBP20.36■□□□□ 0.85
TRIM8-201ENST00000302424 ZNF569Q5MCW4 686 aa20.36■□□□□ 0.85
TRIM8-201ENST00000302424 RGS22Q8NE09 1264 aa20.36■□□□□ 0.85
TRIM8-201ENST00000302424 CRNKL1Q9BZJ0 848 aaKnown RBP20.36■□□□□ 0.85
TRIM8-201ENST00000302424 MYH8P13535 1937 aa20.36■□□□□ 0.85
TRIM8-201ENST00000302424 MAP3K9P80192 1104 aa20.36■□□□□ 0.85
TRIM8-201ENST00000302424 DZIP1Q86YF9 867 aaKnown RBP20.36■□□□□ 0.85
TRIM8-201ENST00000302424 TMEM60Q9H2L4 133 aa20.36■□□□□ 0.85
TRIM8-201ENST00000302424 ADGRG1Q9Y653 693 aa20.36■□□□□ 0.85
TRIM8-201ENST00000302424 PMS1P54277 932 aaKnown RBP20.35■□□□□ 0.85
TRIM8-201ENST00000302424 FBXO33Q7Z6M2 555 aa20.35■□□□□ 0.85
TRIM8-201ENST00000302424 RBM28Q9NW13 759 aaKnown RBP20.35■□□□□ 0.85
TRIM8-201ENST00000302424 TRIM10Q9UDY6 481 aa20.35■□□□□ 0.85
TRIM8-201ENST00000302424 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.35■□□□□ 0.85
TRIM8-201ENST00000302424 MRFAP1Q9Y605 127 aa20.35■□□□□ 0.85
TRIM8-201ENST00000302424 DUOX1Q9NRD9 1551 aa20.35■□□□□ 0.85
TRIM8-201ENST00000302424 CCDC175P0C221 793 aa20.35■□□□□ 0.85
TRIM8-201ENST00000302424 PIP4K2BP78356 416 aa20.35■□□□□ 0.85
TRIM8-201ENST00000302424 BMS1Q14692 1282 aaKnown RBP20.35■□□□□ 0.85
TRIM8-201ENST00000302424 E2F4Q16254 413 aa20.35■□□□□ 0.85
TRIM8-201ENST00000302424 INF2Q27J81 1249 aa20.35■□□□□ 0.85
TRIM8-201ENST00000302424 HEATR3Q7Z4Q2 680 aa20.35■□□□□ 0.85
TRIM8-201ENST00000302424 SH3RF3Q8TEJ3 882 aaPredicted RBP20.35■□□□□ 0.85
TRIM8-201ENST00000302424 NELFBQ8WX92 580 aa20.35■□□□□ 0.85
TRIM8-201ENST00000302424 FERMT2Q96AC1 680 aa20.35■□□□□ 0.85
TRIM8-201ENST00000302424 NUP88Q99567 741 aaPredicted RBP20.35■□□□□ 0.85
TRIM8-201ENST00000302424 VAT1LQ9HCJ6 419 aa20.35■□□□□ 0.85
TRIM8-201ENST00000302424 ERCC3P19447 782 aa20.35■□□□□ 0.85
TRIM8-201ENST00000302424 USP5P45974 858 aa20.35■□□□□ 0.85
TRIM8-201ENST00000302424 SF3B3Q15393 1217 aaKnown RBP20.35■□□□□ 0.85
TRIM8-201ENST00000302424 SLC35G1Q2M3R5 365 aa20.35■□□□□ 0.85
TRIM8-201ENST00000302424 CDKAL1Q5VV42 579 aa20.35■□□□□ 0.85
TRIM8-201ENST00000302424 IQUBQ8NA54 791 aa20.35■□□□□ 0.85
TRIM8-201ENST00000302424 PRCPP42785 496 aa20.34■□□□□ 0.85
TRIM8-201ENST00000302424 PDXDC2PQ6P474 469 aa20.34■□□□□ 0.85
TRIM8-201ENST00000302424 NLRP3Q96P20 1036 aa20.34■□□□□ 0.85
TRIM8-201ENST00000302424 GSDMAQ96QA5 445 aa20.34■□□□□ 0.85
TRIM8-201ENST00000302424 CHP1Q99653 195 aa20.34■□□□□ 0.85
TRIM8-201ENST00000302424 SLF1Q9BQI6 1058 aa20.34■□□□□ 0.85
TRIM8-201ENST00000302424 PARD6BQ9BYG5 372 aa20.34■□□□□ 0.85
TRIM8-201ENST00000302424 KAT14Q9H8E8 782 aa20.34■□□□□ 0.85
TRIM8-201ENST00000302424 ANKIB1Q9P2G1 1089 aa20.34■□□□□ 0.85
TRIM8-201ENST00000302424 PHLPP1O60346 1717 aa20.34■□□□□ 0.85
TRIM8-201ENST00000302424 ELOA2Q8IYF1 753 aaPredicted RBP20.34■□□□□ 0.85
TRIM8-201ENST00000302424 PNMA1Q8ND90 353 aa20.34■□□□□ 0.85
TRIM8-201ENST00000302424 TGFBRAP1Q8WUH2 860 aa20.34■□□□□ 0.85
TRIM8-201ENST00000302424 SETDB2Q96T68 719 aa20.34■□□□□ 0.85
TRIM8-201ENST00000302424 EFCAB8A8MWE9 144 aa20.33■□□□□ 0.85
TRIM8-201ENST00000302424 GNPATO15228 680 aa20.33■□□□□ 0.85
TRIM8-201ENST00000302424 MFAP3LO75121 409 aa20.33■□□□□ 0.85
TRIM8-201ENST00000302424 ERVK-24P63145 666 aa20.33■□□□□ 0.85
TRIM8-201ENST00000302424 PFKFB3Q16875 520 aaPredicted RBP20.33■□□□□ 0.85
TRIM8-201ENST00000302424 MAPKAPK5Q8IW41 473 aa20.33■□□□□ 0.85
TRIM8-201ENST00000302424 MKNK2Q9HBH9 465 aa20.33■□□□□ 0.85
TRIM8-201ENST00000302424 RNF216Q9NWF9 866 aaPredicted RBP20.33■□□□□ 0.85
TRIM8-201ENST00000302424 LRRC15Q8TF66 581 aa20.33■□□□□ 0.84
TRIM8-201ENST00000302424 UIMC1Q96RL1 719 aa20.33■□□□□ 0.84
TRIM8-201ENST00000302424 STAT6P42226 847 aa20.32■□□□□ 0.84
TRIM8-201ENST00000302424 NFIXQ14938 502 aa20.32■□□□□ 0.84
TRIM8-201ENST00000302424 FILIP1LQ4L180 1135 aa20.32■□□□□ 0.84
TRIM8-201ENST00000302424 FCHSD1Q86WN1 690 aa20.32■□□□□ 0.84
TRIM8-201ENST00000302424 HPS3Q969F9 1004 aa20.32■□□□□ 0.84
TRIM8-201ENST00000302424 FAM53CQ9NYF3 392 aa20.32■□□□□ 0.84
TRIM8-201ENST00000302424 NKRFO15226 690 aaKnown RBP eCLIP20.32■□□□□ 0.849e-7■■□□□ 14.5
TRIM8-201ENST00000302424 DDAH1O94760 285 aa20.32■□□□□ 0.84
TRIM8-201ENST00000302424 WWC2Q6AWC2 1192 aa20.32■□□□□ 0.84
TRIM8-201ENST00000302424 BLIDQ8IZY5 108 aa20.32■□□□□ 0.84
TRIM8-201ENST00000302424 SLC35F6Q8N357 371 aa20.32■□□□□ 0.84
TRIM8-201ENST00000302424 SUGCTQ9HAC7 445 aa20.32■□□□□ 0.84
TRIM8-201ENST00000302424 CYTH3O43739 400 aa20.31■□□□□ 0.84
TRIM8-201ENST00000302424 RPN1P04843 607 aaKnown RBP20.31■□□□□ 0.84
TRIM8-201ENST00000302424 CALM1P0DP23 149 aa20.31■□□□□ 0.84
TRIM8-201ENST00000302424 CALM2P0DP24 149 aa20.31■□□□□ 0.84
TRIM8-201ENST00000302424 CALM3P0DP25 149 aa20.31■□□□□ 0.84
TRIM8-201ENST00000302424 PBX1P40424 430 aa20.31■□□□□ 0.84
TRIM8-201ENST00000302424 RCAN1P53805 252 aa20.31■□□□□ 0.84
TRIM8-201ENST00000302424 UBXN1Q04323 297 aa20.31■□□□□ 0.84
TRIM8-201ENST00000302424 KIF4BQ2VIQ3 1234 aa20.31■□□□□ 0.84
TRIM8-201ENST00000302424 PLCH1Q4KWH8 1693 aa20.31■□□□□ 0.84
TRIM8-201ENST00000302424 KCNJ18B7U540 433 aa20.31■□□□□ 0.84
TRIM8-201ENST00000302424 MYO1BO43795 1136 aa20.31■□□□□ 0.84
TRIM8-201ENST00000302424 KCNJ12Q14500 433 aa20.31■□□□□ 0.84
TRIM8-201ENST00000302424 NOL10Q9BSC4 688 aaKnown RBP20.31■□□□□ 0.84
TRIM8-201ENST00000302424 MTA3Q9BTC8 594 aa20.31■□□□□ 0.84
TRIM8-201ENST00000302424 ZRANB2O95218 330 aaKnown RBP eCLIP20.31■□□□□ 0.84
TRIM8-201ENST00000302424 RHOXF2BP0C7M4 288 aa20.31■□□□□ 0.84
TRIM8-201ENST00000302424 PAK1Q13153 545 aa20.31■□□□□ 0.84
TRIM8-201ENST00000302424 RHOXF2Q9BQY4 288 aa20.31■□□□□ 0.84
TRIM8-201ENST00000302424 ARGLU1Q9NWB6 273 aaPredicted RBP20.31■□□□□ 0.84
TRIM8-201ENST00000302424 COPB1P53618 953 aaKnown RBP20.3■□□□□ 0.84
TRIM8-201ENST00000302424 GABPB1Q06547 395 aaPredicted RBP20.3■□□□□ 0.84
TRIM8-201ENST00000302424 PPP2R5BQ15173 497 aa20.3■□□□□ 0.84
TRIM8-201ENST00000302424 ENC1O14682 589 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms