RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 TMOD2Q9NZR1 351 aa7.75□□□□□ -1.17
DEPDC4-201ENST00000299185 MYH1P12882 1939 aa7.75□□□□□ -1.17
DEPDC4-201ENST00000299185 OTOFQ9HC10 1997 aa7.75□□□□□ -1.17
DEPDC4-201ENST00000299185 PAPPA2Q9BXP8 1791 aa7.74□□□□□ -1.17
DEPDC4-201ENST00000299185 MINDY4BA8MYZ0 360 aa7.74□□□□□ -1.17
DEPDC4-201ENST00000299185 USP17L12C9JPN9 530 aa7.74□□□□□ -1.17
DEPDC4-201ENST00000299185 USP17L21D6R901 530 aa7.74□□□□□ -1.17
DEPDC4-201ENST00000299185 SLC27A2O14975 620 aa7.74□□□□□ -1.17
DEPDC4-201ENST00000299185 BAG3O95817 575 aa7.74□□□□□ -1.17
DEPDC4-201ENST00000299185 HSPA1AP0DMV8 641 aaKnown RBP7.74□□□□□ -1.17
DEPDC4-201ENST00000299185 HSPA1BP0DMV9 641 aaKnown RBP7.74□□□□□ -1.17
DEPDC4-201ENST00000299185 PLCD1P51178 756 aa7.74□□□□□ -1.17
DEPDC4-201ENST00000299185 NBPF12Q5TAG4 269 aaPredicted RBP7.74□□□□□ -1.17
DEPDC4-201ENST00000299185 CTR9Q6PD62 1173 aa7.74□□□□□ -1.17
DEPDC4-201ENST00000299185 CASC1Q6TDU7 716 aa7.74□□□□□ -1.17
DEPDC4-201ENST00000299185 ZSCAN29Q8IWY8 852 aaPredicted RBP7.74□□□□□ -1.17
DEPDC4-201ENST00000299185 IFNL3Q8IZI9 196 aa7.74□□□□□ -1.17
DEPDC4-201ENST00000299185 RUFY2Q8WXA3 655 aa7.74□□□□□ -1.17
DEPDC4-201ENST00000299185 CDCA5Q96FF9 252 aa7.74□□□□□ -1.17
DEPDC4-201ENST00000299185 TCEANC2Q96MN5 208 aa7.74□□□□□ -1.17
DEPDC4-201ENST00000299185 TEPSINQ96N21 525 aa7.74□□□□□ -1.17
DEPDC4-201ENST00000299185 NAPBQ9H115 298 aa7.74□□□□□ -1.17
DEPDC4-201ENST00000299185 ZNF408Q9H9D4 720 aa7.74□□□□□ -1.17
DEPDC4-201ENST00000299185 GPCPD1Q9NPB8 672 aa7.74□□□□□ -1.17
DEPDC4-201ENST00000299185 MKRN1Q9UHC7 482 aaKnown RBP7.74□□□□□ -1.17
DEPDC4-201ENST00000299185 PGAP2Q9UHJ9 254 aa7.74□□□□□ -1.17
DEPDC4-201ENST00000299185 IQCA1LA6NCM1 817 aa7.73□□□□□ -1.17
DEPDC4-201ENST00000299185 ZIC2O95409 532 aaPredicted RBP7.73□□□□□ -1.17
DEPDC4-201ENST00000299185 FGAP02671 866 aa7.73□□□□□ -1.17
DEPDC4-201ENST00000299185 POLR3DP05423 398 aaPredicted RBP7.73□□□□□ -1.17
DEPDC4-201ENST00000299185 JAG1P78504 1218 aa7.73□□□□□ -1.17
DEPDC4-201ENST00000299185 PPARAQ07869 468 aa7.73□□□□□ -1.17
DEPDC4-201ENST00000299185 NR5A1Q13285 461 aa7.73□□□□□ -1.17
DEPDC4-201ENST00000299185 LRRFIP1Q32MZ4 808 aaKnown RBP7.73□□□□□ -1.17
DEPDC4-201ENST00000299185 CREB3L3Q68CJ9 461 aa7.73□□□□□ -1.17
DEPDC4-201ENST00000299185 USP50Q70EL3 339 aaPredicted RBP7.73□□□□□ -1.17
DEPDC4-201ENST00000299185 MIGA2Q7L4E1 593 aa7.73□□□□□ -1.17
DEPDC4-201ENST00000299185 KRT26Q7Z3Y9 468 aa7.73□□□□□ -1.17
DEPDC4-201ENST00000299185 CDK15Q96Q40 435 aa7.73□□□□□ -1.17
DEPDC4-201ENST00000299185 IDI2Q9BXS1 227 aa7.73□□□□□ -1.17
DEPDC4-201ENST00000299185 BACH2Q9BYV9 841 aa7.73□□□□□ -1.17
DEPDC4-201ENST00000299185 FAM217BQ9NTX9 383 aaPredicted RBP7.73□□□□□ -1.17
DEPDC4-201ENST00000299185 SPDYE5A6NIY4 337 aa7.72□□□□□ -1.17
DEPDC4-201ENST00000299185 MYO1BO43795 1136 aa7.72□□□□□ -1.17
DEPDC4-201ENST00000299185 CYP21A2P08686 494 aa7.72□□□□□ -1.17
DEPDC4-201ENST00000299185 BMP2P12643 396 aa7.72□□□□□ -1.17
DEPDC4-201ENST00000299185 VEGFAP15692 232 aaPredicted RBP7.72□□□□□ -1.17
DEPDC4-201ENST00000299185 HTRA3P83110 453 aa7.72□□□□□ -1.17
DEPDC4-201ENST00000299185 ADCK5Q3MIX3 580 aa7.72□□□□□ -1.17
DEPDC4-201ENST00000299185 RRP12Q5JTH9 1297 aaKnown RBP7.72□□□□□ -1.17
DEPDC4-201ENST00000299185 C6orf118Q5T5N4 469 aa7.72□□□□□ -1.17
DEPDC4-201ENST00000299185 DESI1Q6ICB0 168 aa7.72□□□□□ -1.17
DEPDC4-201ENST00000299185 KIAA1211Q6ZU35 1233 aa7.72□□□□□ -1.17
DEPDC4-201ENST00000299185 RASGRP2Q7LDG7 609 aa7.72□□□□□ -1.17
DEPDC4-201ENST00000299185 APOBEC3FQ8IUX4 373 aaKnown RBP7.72□□□□□ -1.17
DEPDC4-201ENST00000299185 ZC3H15Q8WU90 426 aaKnown RBP7.72□□□□□ -1.17
DEPDC4-201ENST00000299185 CHMP4CQ96CF2 233 aa7.72□□□□□ -1.17
DEPDC4-201ENST00000299185 CSRNP1Q96S65 589 aa7.72□□□□□ -1.17
DEPDC4-201ENST00000299185 DSCC1Q9BVC3 393 aa7.72□□□□□ -1.17
DEPDC4-201ENST00000299185 USP26Q9BXU7 913 aa7.72□□□□□ -1.17
DEPDC4-201ENST00000299185 LRRC2Q9BYS8 371 aa7.72□□□□□ -1.17
DEPDC4-201ENST00000299185 DEFB129Q9H1M3 183 aa7.72□□□□□ -1.17
DEPDC4-201ENST00000299185 DNMT3AQ9Y6K1 912 aaPredicted RBP7.72□□□□□ -1.17
DEPDC4-201ENST00000299185 ROBO3Q96MS0 1386 aa7.71□□□□□ -1.17
DEPDC4-201ENST00000299185 POLR2AP24928 1970 aaKnown RBP7.71□□□□□ -1.17
DEPDC4-201ENST00000299185 COL2A1P02458 1487 aaPredicted RBP7.71□□□□□ -1.18
DEPDC4-201ENST00000299185 B4E1Z4 1266 aa7.71□□□□□ -1.18
DEPDC4-201ENST00000299185 PATL2C9JE40 543 aaKnown RBP7.71□□□□□ -1.18
DEPDC4-201ENST00000299185 SPTLC1O15269 473 aa7.71□□□□□ -1.18
DEPDC4-201ENST00000299185 NMT2O60551 498 aa7.71□□□□□ -1.18
DEPDC4-201ENST00000299185 DTNBO60941 627 aa7.71□□□□□ -1.18
DEPDC4-201ENST00000299185 ENTPD3O75355 529 aa7.71□□□□□ -1.18
DEPDC4-201ENST00000299185 AKR1B1P15121 316 aa7.71□□□□□ -1.18
DEPDC4-201ENST00000299185 INPP5BP32019 993 aa7.71□□□□□ -1.18
DEPDC4-201ENST00000299185 SHMT1P34896 483 aa7.71□□□□□ -1.18
DEPDC4-201ENST00000299185 ANTXR2P58335 489 aa7.71□□□□□ -1.18
DEPDC4-201ENST00000299185 FOXK2Q01167 660 aa7.71□□□□□ -1.18
DEPDC4-201ENST00000299185 FAM47AQ5JRC9 791 aa7.71□□□□□ -1.18
DEPDC4-201ENST00000299185 C12orf60Q5U649 245 aa7.71□□□□□ -1.18
DEPDC4-201ENST00000299185 NOL8Q76FK4 1167 aaKnown RBP7.71□□□□□ -1.18
DEPDC4-201ENST00000299185 CHST3Q7LGC8 479 aa7.71□□□□□ -1.18
DEPDC4-201ENST00000299185 LDHDQ86WU2 507 aa7.71□□□□□ -1.18
DEPDC4-201ENST00000299185 RAB11FIP4Q86YS3 637 aa7.71□□□□□ -1.18
DEPDC4-201ENST00000299185 KRI1Q8N9T8 703 aaKnown RBP7.71□□□□□ -1.18
DEPDC4-201ENST00000299185 FAM151AQ8WW52 585 aa7.71□□□□□ -1.18
DEPDC4-201ENST00000299185 MAP4K1Q92918 833 aa7.71□□□□□ -1.18
DEPDC4-201ENST00000299185 DCPSQ96C86 337 aaKnown RBP7.71□□□□□ -1.18
DEPDC4-201ENST00000299185 MRIQ9BWK5 157 aa7.71□□□□□ -1.18
DEPDC4-201ENST00000299185 TOMM22Q9NS69 142 aa7.71□□□□□ -1.18
DEPDC4-201ENST00000299185 ARPP21Q9UBL0 812 aaPredicted RBP7.71□□□□□ -1.18
DEPDC4-201ENST00000299185 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.71□□□□□ -1.18
DEPDC4-201ENST00000299185 SNX14Q9Y5W7 946 aa7.71□□□□□ -1.18
DEPDC4-201ENST00000299185 REC8O95072 547 aa7.7□□□□□ -1.18
DEPDC4-201ENST00000299185 GNAT2P19087 354 aa7.7□□□□□ -1.18
DEPDC4-201ENST00000299185 HSPA4P34932 840 aa7.7□□□□□ -1.18
DEPDC4-201ENST00000299185 MLLT1Q03111 559 aaPredicted RBP7.7□□□□□ -1.18
DEPDC4-201ENST00000299185 GABPAQ06546 454 aa7.7□□□□□ -1.18
DEPDC4-201ENST00000299185 DGKZQ13574 1117 aa7.7□□□□□ -1.18
DEPDC4-201ENST00000299185 NECTIN1Q15223 517 aa7.7□□□□□ -1.18
DEPDC4-201ENST00000299185 ALX1Q15699 326 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms