RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 CERS3Q8IU89 383 aa24.98■■□□□ 1.59
SMCO4-201ENST00000298966 ACER1Q8TDN7 264 aa24.98■■□□□ 1.59
SMCO4-201ENST00000298966 BADQ92934 168 aa24.98■■□□□ 1.59
SMCO4-201ENST00000298966 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.98■■□□□ 1.59
SMCO4-201ENST00000298966 EHD4Q9H223 541 aa24.98■■□□□ 1.59
SMCO4-201ENST00000298966 CABP5Q9NP86 173 aa24.98■■□□□ 1.59
SMCO4-201ENST00000298966 SPDYE16A6NNV3 312 aaPredicted RBP24.97■■□□□ 1.59
SMCO4-201ENST00000298966 MYCNP04198 464 aaPredicted RBP24.97■■□□□ 1.59
SMCO4-201ENST00000298966 ZAP70P43403 619 aa24.97■■□□□ 1.59
SMCO4-201ENST00000298966 OLFML2BQ68BL8 750 aa24.97■■□□□ 1.59
SMCO4-201ENST00000298966 TTC6Q86TZ1 520 aa24.97■■□□□ 1.59
SMCO4-201ENST00000298966 MYLIPQ8WY64 445 aa24.97■■□□□ 1.59
SMCO4-201ENST00000298966 RPAP3Q9H6T3 665 aaPredicted RBP24.97■■□□□ 1.59
SMCO4-201ENST00000298966 ZNF236Q9UL36 1845 aa24.96■■□□□ 1.59
SMCO4-201ENST00000298966 TMED8Q6PL24 325 aaPredicted RBP24.96■■□□□ 1.59
SMCO4-201ENST00000298966 DDRGK1Q96HY6 314 aa24.96■■□□□ 1.59
SMCO4-201ENST00000298966 PIH1D3Q9NQM4 214 aaKnown RBP24.96■■□□□ 1.59
SMCO4-201ENST00000298966 PRDM6Q9NQX0 595 aa24.96■■□□□ 1.59
SMCO4-201ENST00000298966 STRNO43815 780 aa24.95■■□□□ 1.58
SMCO4-201ENST00000298966 IGHA2P01877 340 aa24.95■■□□□ 1.58
SMCO4-201ENST00000298966 ADORA2AP29274 412 aa24.95■■□□□ 1.58
SMCO4-201ENST00000298966 TRIM60Q495X7 471 aa24.95■■□□□ 1.58
SMCO4-201ENST00000298966 ANO1Q5XXA6 986 aa24.95■■□□□ 1.58
SMCO4-201ENST00000298966 KIAA1211Q6ZU35 1233 aa24.95■■□□□ 1.58
SMCO4-201ENST00000298966 SEPT4O43236 478 aa24.94■■□□□ 1.58
SMCO4-201ENST00000298966 FOSL2P15408 326 aa24.94■■□□□ 1.58
SMCO4-201ENST00000298966 MCCP23508 829 aa24.94■■□□□ 1.58
SMCO4-201ENST00000298966 SNX17Q15036 470 aa24.94■■□□□ 1.58
SMCO4-201ENST00000298966 MIGA1Q8NAN2 632 aa24.94■■□□□ 1.58
SMCO4-201ENST00000298966 IL27Q8NEV9 243 aa24.94■■□□□ 1.58
SMCO4-201ENST00000298966 SYMPKQ92797 1274 aaKnown RBP24.94■■□□□ 1.58
SMCO4-201ENST00000298966 MOV10L1Q9BXT6 1211 aaKnown RBP24.94■■□□□ 1.58
SMCO4-201ENST00000298966 TTYH1Q9H313 450 aaPredicted RBP24.94■■□□□ 1.58
SMCO4-201ENST00000298966 PDLIM7Q9NR12 457 aa24.94■■□□□ 1.58
SMCO4-201ENST00000298966 HELLSQ9NRZ9 838 aa24.94■■□□□ 1.58
SMCO4-201ENST00000298966 SLC5A4Q9NY91 659 aa24.94■■□□□ 1.58
SMCO4-201ENST00000298966 IDH1O75874 414 aaKnown RBP24.93■■□□□ 1.58
SMCO4-201ENST00000298966 ADCYAP1R1P41586 468 aa24.93■■□□□ 1.58
SMCO4-201ENST00000298966 CWC27Q6UX04 472 aaKnown RBP24.93■■□□□ 1.58
SMCO4-201ENST00000298966 IPO9Q96P70 1041 aaKnown RBP24.93■■□□□ 1.58
SMCO4-201ENST00000298966 USP26Q9BXU7 913 aa24.93■■□□□ 1.58
SMCO4-201ENST00000298966 RNF113AO15541 343 aaKnown RBP24.92■■□□□ 1.58
SMCO4-201ENST00000298966 COG2Q14746 738 aa24.92■■□□□ 1.58
SMCO4-201ENST00000298966 SHCBP1Q8NEM2 672 aa24.92■■□□□ 1.58
SMCO4-201ENST00000298966 HOXC10Q9NYD6 342 aa24.92■■□□□ 1.58
SMCO4-201ENST00000298966 VCANP13611 3396 aa24.92■■□□□ 1.58
SMCO4-201ENST00000298966 NMIQ13287 307 aaPredicted RBP24.91■■□□□ 1.58
SMCO4-201ENST00000298966 FERMT2Q96AC1 680 aa24.91■■□□□ 1.58
SMCO4-201ENST00000298966 SPATC1LQ9H0A9 340 aa24.91■■□□□ 1.58
SMCO4-201ENST00000298966 TMEM265A0A087WTH1 108 aa24.9■■□□□ 1.58
SMCO4-201ENST00000298966 SHMT1P34896 483 aa24.9■■□□□ 1.58
SMCO4-201ENST00000298966 MAP3K12Q12852 859 aa24.9■■□□□ 1.58
SMCO4-201ENST00000298966 LRRC41Q15345 812 aa24.9■■□□□ 1.58
SMCO4-201ENST00000298966 MCMDC2Q4G0Z9 681 aa24.9■■□□□ 1.58
SMCO4-201ENST00000298966 C1orf53Q5VUE5 145 aa24.9■■□□□ 1.58
SMCO4-201ENST00000298966 SH3RF1Q7Z6J0 888 aa24.9■■□□□ 1.58
SMCO4-201ENST00000298966 MAGEB6Q8N7X4 407 aa24.9■■□□□ 1.58
SMCO4-201ENST00000298966 TANGO6Q9C0B7 1094 aa24.9■■□□□ 1.58
SMCO4-201ENST00000298966 ANO2Q9NQ90 1003 aa24.9■■□□□ 1.58
SMCO4-201ENST00000298966 PRUNE2Q8WUY3 3088 aa24.89■■□□□ 1.58
SMCO4-201ENST00000298966 EYSQ5T1H1 3165 aa24.89■■□□□ 1.58
SMCO4-201ENST00000298966 TRIM43BA6NCK2 446 aa24.89■■□□□ 1.58
SMCO4-201ENST00000298966 ERCC3P19447 782 aa24.89■■□□□ 1.58
SMCO4-201ENST00000298966 TLE2Q04725 743 aa24.89■■□□□ 1.58
SMCO4-201ENST00000298966 SEPT2Q15019 361 aa24.89■■□□□ 1.58
SMCO4-201ENST00000298966 UBE3CQ15386 1083 aa24.89■■□□□ 1.58
SMCO4-201ENST00000298966 ZMYM1Q5SVZ6 1142 aa24.89■■□□□ 1.58
SMCO4-201ENST00000298966 TRIM43Q96BQ3 446 aaPredicted RBP24.89■■□□□ 1.58
SMCO4-201ENST00000298966 COBLO75128 1261 aa24.88■■□□□ 1.57
SMCO4-201ENST00000298966 GUCY1A2P33402 732 aa24.88■■□□□ 1.57
SMCO4-201ENST00000298966 ANAPC15P60006 121 aa24.88■■□□□ 1.57
SMCO4-201ENST00000298966 RNPC3Q96LT9 517 aaKnown RBP24.88■■□□□ 1.57
SMCO4-201ENST00000298966 MROH8Q9H579 483 aa24.88■■□□□ 1.57
SMCO4-201ENST00000298966 ANTXR1Q9H6X2 564 aa24.88■■□□□ 1.57
SMCO4-201ENST00000298966 TACC3Q9Y6A5 838 aa24.88■■□□□ 1.57
SMCO4-201ENST00000298966 SMCHD1A6NHR9 2005 aa24.87■■□□□ 1.57
SMCO4-201ENST00000298966 POLR3DP05423 398 aaPredicted RBP24.87■■□□□ 1.57
SMCO4-201ENST00000298966 PLS1Q14651 629 aa24.87■■□□□ 1.57
SMCO4-201ENST00000298966 FAM47AQ5JRC9 791 aa24.87■■□□□ 1.57
SMCO4-201ENST00000298966 PRAMEF19Q5SWL8 479 aa24.87■■□□□ 1.57
SMCO4-201ENST00000298966 ABRAQ8N0Z2 381 aa24.87■■□□□ 1.57
SMCO4-201ENST00000298966 MB21D1Q8N884 522 aa24.87■■□□□ 1.57
SMCO4-201ENST00000298966 APPBP2Q92624 585 aa24.87■■□□□ 1.57
SMCO4-201ENST00000298966 A0A0G2JMZ2 1700 aa24.86■■□□□ 1.57
SMCO4-201ENST00000298966 SPTBN5Q9NRC6 3674 aaKnown RBP24.86■■□□□ 1.57
SMCO4-201ENST00000298966 A0A0D9SFI3 127 aa24.86■■□□□ 1.57
SMCO4-201ENST00000298966 MPHOSPH10O00566 681 aaKnown RBP24.86■■□□□ 1.57
SMCO4-201ENST00000298966 PLCD1P51178 756 aa24.86■■□□□ 1.57
SMCO4-201ENST00000298966 NCAPG2Q86XI2 1143 aa24.86■■□□□ 1.57
SMCO4-201ENST00000298966 FAM227BQ96M60 508 aa24.86■■□□□ 1.57
SMCO4-201ENST00000298966 ZNFX1Q9P2E3 1918 aaKnown RBP24.86■■□□□ 1.57
SMCO4-201ENST00000298966 CCDC171Q6TFL3 1326 aa24.86■■□□□ 1.57
SMCO4-201ENST00000298966 NAV1Q8NEY1 1877 aa24.85■■□□□ 1.57
SMCO4-201ENST00000298966 CLTBP09497 229 aa24.85■■□□□ 1.57
SMCO4-201ENST00000298966 ADD2P35612 726 aa24.85■■□□□ 1.57
SMCO4-201ENST00000298966 IL17RAQ96F46 866 aa24.85■■□□□ 1.57
SMCO4-201ENST00000298966 MAML3Q96JK9 1138 aa24.85■■□□□ 1.57
SMCO4-201ENST00000298966 LSG1Q9H089 658 aaKnown RBP24.85■■□□□ 1.57
SMCO4-201ENST00000298966 PHF24Q9UPV7 400 aa24.85■■□□□ 1.57
SMCO4-201ENST00000298966 A0A1W2PRG0 241 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms