RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 SLFN13Q68D06 897 aa21.37■■□□□ 1.01
SEC61A2-201ENST00000298428 DIS3L2Q8IYB7 885 aaKnown RBP21.37■■□□□ 1.01
SEC61A2-201ENST00000298428 GMCL1P1Q8NEA9 526 aa21.37■■□□□ 1.01
SEC61A2-201ENST00000298428 DCAF4Q8WV16 495 aa21.37■■□□□ 1.01
SEC61A2-201ENST00000298428 ZNF396Q96N95 335 aaPredicted RBP21.37■■□□□ 1.01
SEC61A2-201ENST00000298428 ARHGEF10LQ9HCE6 1279 aa21.37■■□□□ 1.01
SEC61A2-201ENST00000298428 GPCPD1Q9NPB8 672 aa21.37■■□□□ 1.01
SEC61A2-201ENST00000298428 PPP2R3BQ9Y5P8 575 aa21.37■■□□□ 1.01
SEC61A2-201ENST00000298428 DDX49Q9Y6V7 483 aaKnown RBP21.37■■□□□ 1.01
SEC61A2-201ENST00000298428 U2AF2P26368 475 aaKnown RBP eCLIP21.36■■□□□ 1.01
SEC61A2-201ENST00000298428 ATL3Q6DD88 541 aa21.36■■□□□ 1.01
SEC61A2-201ENST00000298428 HOOK2Q96ED9 719 aa21.36■■□□□ 1.01
SEC61A2-201ENST00000298428 L3MBTL3Q96JM7 780 aaPredicted RBP21.36■■□□□ 1.01
SEC61A2-201ENST00000298428 PHF20Q9BVI0 1012 aa21.36■■□□□ 1.01
SEC61A2-201ENST00000298428 UBA5Q9GZZ9 404 aa21.36■■□□□ 1.01
SEC61A2-201ENST00000298428 SYNPO2Q9UMS6 1093 aa21.36■■□□□ 1.01
SEC61A2-201ENST00000298428 PITPNM2Q9BZ72 1349 aa21.36■■□□□ 1.01
SEC61A2-201ENST00000298428 ASNSP08243 561 aa21.35■■□□□ 1.01
SEC61A2-201ENST00000298428 SLC1A4P43007 532 aa21.35■■□□□ 1.01
SEC61A2-201ENST00000298428 MYSM1Q5VVJ2 828 aa21.35■■□□□ 1.01
SEC61A2-201ENST00000298428 DCAF15Q66K64 600 aa21.35■■□□□ 1.01
SEC61A2-201ENST00000298428 RRP36Q96EU6 259 aaKnown RBP21.35■■□□□ 1.01
SEC61A2-201ENST00000298428 SPATA32Q96LK8 384 aa21.35■■□□□ 1.01
SEC61A2-201ENST00000298428 A0A1W2PRG0 241 aa21.35■■□□□ 1.01
SEC61A2-201ENST00000298428 BTBD18B2RXH4 712 aa21.35■■□□□ 1.01
SEC61A2-201ENST00000298428 F5H6K3 240 aa21.35■■□□□ 1.01
SEC61A2-201ENST00000298428 VEGFAP15692 232 aaPredicted RBP21.35■■□□□ 1.01
SEC61A2-201ENST00000298428 KLRC3Q07444 240 aa21.35■■□□□ 1.01
SEC61A2-201ENST00000298428 KCTD1Q719H9 257 aa21.35■■□□□ 1.01
SEC61A2-201ENST00000298428 GPKOWQ92917 476 aaPredicted RBP eCLIP21.35■■□□□ 1.01
SEC61A2-201ENST00000298428 FOXP1Q9H334 677 aaPredicted RBP21.35■■□□□ 1.01
SEC61A2-201ENST00000298428 RIOX1Q9H6W3 641 aa21.35■■□□□ 1.01
SEC61A2-201ENST00000298428 SEC63Q9UGP8 760 aaKnown RBP21.35■■□□□ 1.01
SEC61A2-201ENST00000298428 ISY1Q9ULR0 285 aaKnown RBP21.35■■□□□ 1.01
SEC61A2-201ENST00000298428 KLHL40Q2TBA0 621 aa21.34■■□□□ 1.01
SEC61A2-201ENST00000298428 PRAMEF18Q5VWM3 479 aa21.34■■□□□ 1.01
SEC61A2-201ENST00000298428 HOMER1Q86YM7 354 aa21.34■■□□□ 1.01
SEC61A2-201ENST00000298428 USP28Q96RU2 1077 aa21.34■■□□□ 1.01
SEC61A2-201ENST00000298428 VAT1LQ9HCJ6 419 aa21.34■■□□□ 1.01
SEC61A2-201ENST00000298428 SH3GLB2Q9NR46 395 aa21.34■■□□□ 1.01
SEC61A2-201ENST00000298428 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.34■■□□□ 1.01
SEC61A2-201ENST00000298428 GADD45BO75293 160 aaPredicted RBP21.33■■□□□ 1.01
SEC61A2-201ENST00000298428 NDUFB10O96000 172 aa21.33■■□□□ 1.01
SEC61A2-201ENST00000298428 ECE1P42892 770 aa21.33■■□□□ 1.01
SEC61A2-201ENST00000298428 CEBPZQ03701 1054 aaKnown RBP21.33■■□□□ 1.01
SEC61A2-201ENST00000298428 NOSTRINQ8IVI9 506 aa21.33■■□□□ 1.01
SEC61A2-201ENST00000298428 ACER1Q8TDN7 264 aa21.33■■□□□ 1.01
SEC61A2-201ENST00000298428 LEO1Q8WVC0 666 aaPredicted RBP21.33■■□□□ 1.01
SEC61A2-201ENST00000298428 GMCL1Q96IK5 515 aa21.33■■□□□ 1.01
SEC61A2-201ENST00000298428 BRMS1Q9HCU9 246 aa21.33■■□□□ 1.01
SEC61A2-201ENST00000298428 ELP1O95163 1332 aa21.33■■□□□ 1.01
SEC61A2-201ENST00000298428 GLTPD2A6NH11 291 aa21.32■■□□□ 1
SEC61A2-201ENST00000298428 KRT2P35908 639 aa21.32■■□□□ 1
SEC61A2-201ENST00000298428 WWC2Q6AWC2 1192 aa21.32■■□□□ 1
SEC61A2-201ENST00000298428 TTBK2Q6IQ55 1244 aa21.32■■□□□ 1
SEC61A2-201ENST00000298428 HEATR3Q7Z4Q2 680 aa21.32■■□□□ 1
SEC61A2-201ENST00000298428 GPT2Q8TD30 523 aa21.32■■□□□ 1
SEC61A2-201ENST00000298428 PIGSQ96S52 555 aa21.32■■□□□ 1
SEC61A2-201ENST00000298428 ZNF341Q9BYN7 854 aa21.32■■□□□ 1
SEC61A2-201ENST00000298428 FTOQ9C0B1 505 aaKnown RBP eCLIP21.32■■□□□ 1
SEC61A2-201ENST00000298428 TMX2Q9Y320 296 aa21.32■■□□□ 1
SEC61A2-201ENST00000298428 ATAD5Q96QE3 1844 aa21.32■■□□□ 1
SEC61A2-201ENST00000298428 CTNND1O60716 968 aaKnown RBP21.32■■□□□ 1
SEC61A2-201ENST00000298428 MBD3O95983 291 aa21.32■■□□□ 1
SEC61A2-201ENST00000298428 NLRP5P59047 1200 aa21.32■■□□□ 1
SEC61A2-201ENST00000298428 NR5A1Q13285 461 aa21.32■■□□□ 1
SEC61A2-201ENST00000298428 OXER1Q8TDS5 423 aa21.32■■□□□ 1
SEC61A2-201ENST00000298428 DCPSQ96C86 337 aaKnown RBP21.32■■□□□ 1
SEC61A2-201ENST00000298428 GINM1Q9NU53 330 aa21.32■■□□□ 1
SEC61A2-201ENST00000298428 BARHL2Q9NY43 387 aa21.32■■□□□ 1
SEC61A2-201ENST00000298428 SOCS7O14512 581 aa21.31■■□□□ 1
SEC61A2-201ENST00000298428 UBE2HP62256 183 aa21.31■■□□□ 1
SEC61A2-201ENST00000298428 ADGRF4Q8IZF3 695 aa21.31■■□□□ 1
SEC61A2-201ENST00000298428 CCDC148Q8NFR7 591 aa21.31■■□□□ 1
SEC61A2-201ENST00000298428 SH2D4AQ9H788 454 aa21.31■■□□□ 1
SEC61A2-201ENST00000298428 GOPCQ9HD26 462 aa21.31■■□□□ 1
SEC61A2-201ENST00000298428 STXBP3O00186 592 aa21.3■■□□□ 1
SEC61A2-201ENST00000298428 SLC16A2P36021 539 aa21.3■■□□□ 1
SEC61A2-201ENST00000298428 NPY5RQ15761 445 aa21.3■■□□□ 1
SEC61A2-201ENST00000298428 USP50Q70EL3 339 aaPredicted RBP21.3■■□□□ 1
SEC61A2-201ENST00000298428 BMP3P12645 472 aa21.3■■□□□ 1
SEC61A2-201ENST00000298428 CALML3P27482 149 aa21.3■■□□□ 1
SEC61A2-201ENST00000298428 EPHX2P34913 555 aa21.3■■□□□ 1
SEC61A2-201ENST00000298428 SUPT20HL1Q3ZLR7 823 aa21.3■■□□□ 1
SEC61A2-201ENST00000298428 TYW1BQ6NUM6 668 aa21.3■■□□□ 1
SEC61A2-201ENST00000298428 FAM177A1Q8N128 213 aaPredicted RBP21.3■■□□□ 1
SEC61A2-201ENST00000298428 NUP88Q99567 741 aaPredicted RBP21.3■■□□□ 1
SEC61A2-201ENST00000298428 JMJD4Q9H9V9 463 aa21.3■■□□□ 1
SEC61A2-201ENST00000298428 RTEL1Q9NZ71 1219 aa21.3■■□□□ 1
SEC61A2-201ENST00000298428 INPP5BP32019 993 aa21.29■■□□□ 1
SEC61A2-201ENST00000298428 CCDC84Q86UT8 332 aaPredicted RBP21.29■■□□□ 1
SEC61A2-201ENST00000298428 SULF1Q8IWU6 871 aa21.29■■□□□ 1
SEC61A2-201ENST00000298428 SPICE1Q8N0Z3 855 aa21.29■■□□□ 1
SEC61A2-201ENST00000298428 POLR3EQ9NVU0 708 aa21.29■■□□□ 1
SEC61A2-201ENST00000298428 ZNF112Q9UJU3 913 aa21.29■■□□□ 1
SEC61A2-201ENST00000298428 RCOR1Q9UKL0 485 aa21.29■■□□□ 1
SEC61A2-201ENST00000298428 SSC5DA1L4H1 1573 aa21.29■■□□□ 1
SEC61A2-201ENST00000298428 POLR2AP24928 1970 aaKnown RBP21.29■■□□□ 1
SEC61A2-201ENST00000298428 hCG_1984214I3L0E3 225 aa21.28■■□□□ 1
SEC61A2-201ENST00000298428 TPRNQ4KMQ1 711 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms