RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 GCP02774 474 aa15.15■□□□□ 0.02
RPUSD4-201ENST00000298317 MAP2K1Q02750 393 aaPredicted RBP15.15■□□□□ 0.02
RPUSD4-201ENST00000298317 C2orf54Q08AI8 447 aa15.15■□□□□ 0.02
RPUSD4-201ENST00000298317 WDR59Q6PJI9 974 aa15.15■□□□□ 0.02
RPUSD4-201ENST00000298317 B4GALNT4Q76KP1 1039 aa15.15■□□□□ 0.02
RPUSD4-201ENST00000298317 SND1Q7KZF4 910 aaKnown RBP eCLIP15.15■□□□□ 0.02
RPUSD4-201ENST00000298317 SPATS2Q86XZ4 545 aaKnown RBP15.15■□□□□ 0.02
RPUSD4-201ENST00000298317 ANKRD18AQ8IVF6 992 aa15.15■□□□□ 0.02
RPUSD4-201ENST00000298317 MMGT1Q8N4V1 131 aa15.15■□□□□ 0.02
RPUSD4-201ENST00000298317 FAM212AQ96EL1 285 aa15.15■□□□□ 0.02
RPUSD4-201ENST00000298317 RRP36Q96EU6 259 aaKnown RBP15.15■□□□□ 0.02
RPUSD4-201ENST00000298317 SGSM3Q96HU1 749 aa15.15■□□□□ 0.02
RPUSD4-201ENST00000298317 TACO1Q9BSH4 297 aaKnown RBP15.15■□□□□ 0.02
RPUSD4-201ENST00000298317 SAMM50Q9Y512 469 aa15.15■□□□□ 0.02
RPUSD4-201ENST00000298317 ZNF185O15231 689 aa15.14■□□□□ 0.01
RPUSD4-201ENST00000298317 KRT86O43790 486 aa15.14■□□□□ 0.01
RPUSD4-201ENST00000298317 KRT83P78385 493 aa15.14■□□□□ 0.01
RPUSD4-201ENST00000298317 PAK1Q13153 545 aa15.14■□□□□ 0.01
RPUSD4-201ENST00000298317 ZNF572Q7Z3I7 529 aaPredicted RBP15.14■□□□□ 0.01
RPUSD4-201ENST00000298317 TTC5Q8N0Z6 440 aa15.14■□□□□ 0.01
RPUSD4-201ENST00000298317 PURBQ96QR8 312 aaKnown RBP15.14■□□□□ 0.01
RPUSD4-201ENST00000298317 PAGR1Q9BTK6 254 aa15.14■□□□□ 0.01
RPUSD4-201ENST00000298317 CABP5Q9NP86 173 aa15.14■□□□□ 0.01
RPUSD4-201ENST00000298317 GNL3LQ9NVN8 582 aaKnown RBP15.14■□□□□ 0.01
RPUSD4-201ENST00000298317 XDHP47989 1333 aa15.14■□□□□ 0.01
RPUSD4-201ENST00000298317 ZEB2O60315 1214 aa15.14■□□□□ 0.01
RPUSD4-201ENST00000298317 PHKG2P15735 406 aa15.14■□□□□ 0.01
RPUSD4-201ENST00000298317 GPTP24298 496 aa15.14■□□□□ 0.01
RPUSD4-201ENST00000298317 UBXN1Q04323 297 aa15.14■□□□□ 0.01
RPUSD4-201ENST00000298317 TTMPQ5BVD1 217 aa15.14■□□□□ 0.01
RPUSD4-201ENST00000298317 STAG1Q8WVM7 1258 aa15.14■□□□□ 0.01
RPUSD4-201ENST00000298317 FBXO3Q9UK99 471 aa15.14■□□□□ 0.01
RPUSD4-201ENST00000298317 TRIM75PA6NK02 468 aa15.13■□□□□ 0.01
RPUSD4-201ENST00000298317 SETQ01105 290 aaPredicted RBP15.13■□□□□ 0.01
RPUSD4-201ENST00000298317 ITIH3Q06033 890 aa15.13■□□□□ 0.01
RPUSD4-201ENST00000298317 MEA1Q16626 185 aa15.13■□□□□ 0.01
RPUSD4-201ENST00000298317 CCDC70Q6NSX1 233 aa15.13■□□□□ 0.01
RPUSD4-201ENST00000298317 FNBP4Q8N3X1 1017 aaPredicted RBP15.13■□□□□ 0.01
RPUSD4-201ENST00000298317 AXIN2Q9Y2T1 843 aa15.13■□□□□ 0.01
RPUSD4-201ENST00000298317 A0A1W2PQC6 194 aa15.13■□□□□ 0.01
RPUSD4-201ENST00000298317 MYO1FO00160 1098 aa15.13■□□□□ 0.01
RPUSD4-201ENST00000298317 NDUFAB1O14561 156 aa15.13■□□□□ 0.01
RPUSD4-201ENST00000298317 IFIT3O14879 490 aaKnown RBP15.13■□□□□ 0.01
RPUSD4-201ENST00000298317 MEFVO15553 781 aaPredicted RBP15.13■□□□□ 0.01
RPUSD4-201ENST00000298317 RTN1Q16799 776 aa15.13■□□□□ 0.01
RPUSD4-201ENST00000298317 RRAGBQ5VZM2 374 aa15.13■□□□□ 0.01
RPUSD4-201ENST00000298317 YTHDF3Q7Z739 585 aaKnown RBP15.13■□□□□ 0.01
RPUSD4-201ENST00000298317 FERMT2Q96AC1 680 aa15.13■□□□□ 0.01
RPUSD4-201ENST00000298317 AIDAQ96BJ3 306 aa15.13■□□□□ 0.01
RPUSD4-201ENST00000298317 ZSWIM5Q9P217 1185 aa15.13■□□□□ 0.01
RPUSD4-201ENST00000298317 CAPN11Q9UMQ6 739 aa15.13■□□□□ 0.01
RPUSD4-201ENST00000298317 IQSEC3Q9UPP2 1182 aaPredicted RBP15.13■□□□□ 0.01
RPUSD4-201ENST00000298317 LUC7L2Q9Y383 392 aaKnown RBP15.13■□□□□ 0.01
RPUSD4-201ENST00000298317 AKAP11Q9UKA4 1901 aa15.13■□□□□ 0.01
RPUSD4-201ENST00000298317 TIAM2Q8IVF5 1701 aa15.13■□□□□ 0.01
RPUSD4-201ENST00000298317 RCCD1A6NED2 376 aa15.12■□□□□ 0.01
RPUSD4-201ENST00000298317 C21orf2O43822 256 aa15.12■□□□□ 0.01
RPUSD4-201ENST00000298317 ALS2CLQ60I27 953 aa15.12■□□□□ 0.01
RPUSD4-201ENST00000298317 TTC19Q6DKK2 380 aaPredicted RBP15.12■□□□□ 0.01
RPUSD4-201ENST00000298317 KIAA1328Q86T90 577 aa15.12■□□□□ 0.01
RPUSD4-201ENST00000298317 CRACR2BQ8N4Y2 399 aaPredicted RBP15.12■□□□□ 0.01
RPUSD4-201ENST00000298317 ARL8AQ96BM9 186 aa15.12■□□□□ 0.01
RPUSD4-201ENST00000298317 LACRTQ9GZZ8 138 aa15.12■□□□□ 0.01
RPUSD4-201ENST00000298317 PPP1R12AO14974 1030 aaPredicted RBP15.12■□□□□ 0.01
RPUSD4-201ENST00000298317 MCAMP43121 646 aa15.12■□□□□ 0.01
RPUSD4-201ENST00000298317 UBE3CQ15386 1083 aa15.12■□□□□ 0.01
RPUSD4-201ENST00000298317 CREG2Q8IUH2 290 aa15.12■□□□□ 0.01
RPUSD4-201ENST00000298317 MB21D1Q8N884 522 aa15.12■□□□□ 0.01
RPUSD4-201ENST00000298317 NELFBQ8WX92 580 aa15.12■□□□□ 0.01
RPUSD4-201ENST00000298317 INCENPQ9NQS7 918 aa15.12■□□□□ 0.01
RPUSD4-201ENST00000298317 DISP2A7MBM2 1401 aa15.12■□□□□ 0.01
RPUSD4-201ENST00000298317 FAM205CA6NFA0 338 aa15.11■□□□□ 0.01
RPUSD4-201ENST00000298317 LGALS16A8MUM7 142 aa15.11■□□□□ 0.01
RPUSD4-201ENST00000298317 KIAA0754O94854 1291 aa15.11■□□□□ 0.01
RPUSD4-201ENST00000298317 IDEP14735 1019 aa15.11■□□□□ 0.01
RPUSD4-201ENST00000298317 EPHB4P54760 987 aa15.11■□□□□ 0.01
RPUSD4-201ENST00000298317 PDCLQ13371 301 aa15.11■□□□□ 0.01
RPUSD4-201ENST00000298317 ALX1Q15699 326 aa15.11■□□□□ 0.01
RPUSD4-201ENST00000298317 EZH2Q15910 746 aaKnown RBP15.11■□□□□ 0.01
RPUSD4-201ENST00000298317 LRCH2Q5VUJ6 765 aa15.11■□□□□ 0.01
RPUSD4-201ENST00000298317 EMBQ6PCB8 327 aa15.11■□□□□ 0.01
RPUSD4-201ENST00000298317 OTUD6BQ8N6M0 293 aa15.11■□□□□ 0.01
RPUSD4-201ENST00000298317 TSEN2Q8NCE0 465 aaKnown RBP15.11■□□□□ 0.01
RPUSD4-201ENST00000298317 HDAC7Q8WUI4 952 aa15.11■□□□□ 0.01
RPUSD4-201ENST00000298317 CAVIN3Q969G5 261 aa15.11■□□□□ 0.01
RPUSD4-201ENST00000298317 DMGDHQ9UI17 866 aaKnown RBP15.11■□□□□ 0.01
RPUSD4-201ENST00000298317 NBPF26B4DH59 902 aa15.11■□□□□ 0.01
RPUSD4-201ENST00000298317 NBPF10Q6P3W6 841 aaKnown RBP15.11■□□□□ 0.01
RPUSD4-201ENST00000298317 IRF2BP1Q8IU81 584 aa15.11■□□□□ 0.01
RPUSD4-201ENST00000298317 NBPF15Q8N660 670 aa15.11■□□□□ 0.01
RPUSD4-201ENST00000298317 ZNF507Q8TCN5 953 aa15.11■□□□□ 0.01
RPUSD4-201ENST00000298317 SHISA4Q96DD7 197 aa15.11■□□□□ 0.01
RPUSD4-201ENST00000298317 JPH2Q9BR39 696 aaPredicted RBP15.11■□□□□ 0.01
RPUSD4-201ENST00000298317 LRRC1Q9BTT6 524 aa15.11■□□□□ 0.01
RPUSD4-201ENST00000298317 VPS54Q9P1Q0 977 aa15.11■□□□□ 0.01
RPUSD4-201ENST00000298317 SNX12Q9UMY4 172 aa15.11■□□□□ 0.01
RPUSD4-201ENST00000298317 CHD4Q14839 1912 aa15.11■□□□□ 0.01
RPUSD4-201ENST00000298317 MYH13Q9UKX3 1938 aa15.1■□□□□ 0.01
RPUSD4-201ENST00000298317 BMP15O95972 392 aa15.1■□□□□ 0.01
RPUSD4-201ENST00000298317 TNFRSF8P28908 595 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms