RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 NDUFB10O96000 172 aa28.52■■■□□ 2.16
GTF2A1-201ENST00000298173 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.52■■■□□ 2.16
GTF2A1-201ENST00000298173 hCG_1642624A0A1W2PR95 340 aa28.51■■■□□ 2.16
GTF2A1-201ENST00000298173 ZKSCAN4Q969J2 545 aaPredicted RBP28.51■■■□□ 2.16
GTF2A1-201ENST00000298173 CDCA5Q96FF9 252 aa28.51■■■□□ 2.16
GTF2A1-201ENST00000298173 GLIS2Q9BZE0 524 aaPredicted RBP28.51■■■□□ 2.16
GTF2A1-201ENST00000298173 CPVLQ9H3G5 476 aa28.51■■■□□ 2.16
GTF2A1-201ENST00000298173 POTEIP0CG38 1075 aa28.51■■■□□ 2.15
GTF2A1-201ENST00000298173 POTEJP0CG39 1038 aa28.51■■■□□ 2.15
GTF2A1-201ENST00000298173 SLC1A4P43007 532 aa28.51■■■□□ 2.15
GTF2A1-201ENST00000298173 FOSBP53539 338 aa28.51■■■□□ 2.15
GTF2A1-201ENST00000298173 GUCY1B3Q02153 619 aa28.51■■■□□ 2.15
GTF2A1-201ENST00000298173 PFKFB3Q16875 520 aaPredicted RBP28.51■■■□□ 2.15
GTF2A1-201ENST00000298173 NOL9Q5SY16 702 aaKnown RBP28.51■■■□□ 2.15
GTF2A1-201ENST00000298173 KRT40Q6A162 431 aa28.51■■■□□ 2.15
GTF2A1-201ENST00000298173 CCDC84Q86UT8 332 aaPredicted RBP28.51■■■□□ 2.15
GTF2A1-201ENST00000298173 UBA5Q9GZZ9 404 aa28.51■■■□□ 2.15
GTF2A1-201ENST00000298173 BAG4O95429 457 aaKnown RBP28.5■■■□□ 2.15
GTF2A1-201ENST00000298173 KIAA1755Q5JYT7 1200 aa28.5■■■□□ 2.15
GTF2A1-201ENST00000298173 TTBK2Q6IQ55 1244 aa28.5■■■□□ 2.15
GTF2A1-201ENST00000298173 KCTD1Q719H9 257 aa28.5■■■□□ 2.15
GTF2A1-201ENST00000298173 SHISA4Q96DD7 197 aa28.5■■■□□ 2.15
GTF2A1-201ENST00000298173 SH2D4AQ9H788 454 aa28.5■■■□□ 2.15
GTF2A1-201ENST00000298173 GPCPD1Q9NPB8 672 aa28.5■■■□□ 2.15
GTF2A1-201ENST00000298173 PAPPA2Q9BXP8 1791 aa28.5■■■□□ 2.15
GTF2A1-201ENST00000298173 RESTQ13127 1097 aa28.49■■■□□ 2.15
GTF2A1-201ENST00000298173 FERMT3Q86UX7 667 aa28.49■■■□□ 2.15
GTF2A1-201ENST00000298173 VCPKMTQ9H867 229 aa28.49■■■□□ 2.15
GTF2A1-201ENST00000298173 TCHHQ07283 1943 aa28.49■■■□□ 2.15
GTF2A1-201ENST00000298173 SCG2P13521 617 aa28.48■■■□□ 2.15
GTF2A1-201ENST00000298173 PTPRAP18433 802 aa28.48■■■□□ 2.15
GTF2A1-201ENST00000298173 NFKBIBQ15653 356 aa28.48■■■□□ 2.15
GTF2A1-201ENST00000298173 WDR18Q9BV38 432 aa28.48■■■□□ 2.15
GTF2A1-201ENST00000298173 ZSCAN16Q9H4T2 348 aaPredicted RBP28.48■■■□□ 2.15
GTF2A1-201ENST00000298173 GOPCQ9HD26 462 aa28.48■■■□□ 2.15
GTF2A1-201ENST00000298173 PHIPQ8WWQ0 1821 aa28.48■■■□□ 2.15
GTF2A1-201ENST00000298173 PPP1R12BO60237 982 aaPredicted RBP28.48■■■□□ 2.15
GTF2A1-201ENST00000298173 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.48■■■□□ 2.15
GTF2A1-201ENST00000298173 GBP4Q96PP9 640 aa28.48■■■□□ 2.15
GTF2A1-201ENST00000298173 ATP6V1DQ9Y5K8 247 aa28.48■■■□□ 2.15
GTF2A1-201ENST00000298173 BMP3P12645 472 aa28.47■■■□□ 2.15
GTF2A1-201ENST00000298173 MAP3K9P80192 1104 aa28.47■■■□□ 2.15
GTF2A1-201ENST00000298173 CCDC96Q2M329 555 aa28.47■■■□□ 2.15
GTF2A1-201ENST00000298173 CHAMP1Q96JM3 812 aa28.47■■■□□ 2.15
GTF2A1-201ENST00000298173 CLEC11AQ9Y240 323 aa28.47■■■□□ 2.15
GTF2A1-201ENST00000298173 PRKG1Q13976 671 aa28.46■■■□□ 2.15
GTF2A1-201ENST00000298173 TRIM29Q14134 588 aa28.46■■■□□ 2.15
GTF2A1-201ENST00000298173 MTMR8Q96EF0 704 aa28.46■■■□□ 2.15
GTF2A1-201ENST00000298173 KIAA1683Q9H0B3 1180 aa28.46■■■□□ 2.15
GTF2A1-201ENST00000298173 RAD21O60216 631 aa28.45■■■□□ 2.15
GTF2A1-201ENST00000298173 MAP3K11Q16584 847 aa28.45■■■□□ 2.15
GTF2A1-201ENST00000298173 BTNL9Q6UXG8 535 aa28.45■■■□□ 2.15
GTF2A1-201ENST00000298173 ADGRF4Q8IZF3 695 aa28.45■■■□□ 2.15
GTF2A1-201ENST00000298173 NUP88Q99567 741 aaPredicted RBP28.45■■■□□ 2.15
GTF2A1-201ENST00000298173 JMJD4Q9H9V9 463 aa28.45■■■□□ 2.15
GTF2A1-201ENST00000298173 PICK1Q9NRD5 415 aa28.45■■■□□ 2.15
GTF2A1-201ENST00000298173 MMP1P03956 469 aa28.45■■■□□ 2.14
GTF2A1-201ENST00000298173 MCM4P33991 863 aa28.45■■■□□ 2.14
GTF2A1-201ENST00000298173 NF2P35240 595 aa28.45■■■□□ 2.14
GTF2A1-201ENST00000298173 SPICE1Q8N0Z3 855 aa28.45■■■□□ 2.14
GTF2A1-201ENST00000298173 PIBF1Q8WXW3 757 aa28.45■■■□□ 2.14
GTF2A1-201ENST00000298173 RRP36Q96EU6 259 aaKnown RBP28.45■■■□□ 2.14
GTF2A1-201ENST00000298173 PHF20Q9BVI0 1012 aa28.45■■■□□ 2.14
GTF2A1-201ENST00000298173 VAT1LQ9HCJ6 419 aa28.45■■■□□ 2.14
GTF2A1-201ENST00000298173 VPS54Q9P1Q0 977 aa28.45■■■□□ 2.14
GTF2A1-201ENST00000298173 XBP1P17861 261 aa28.44■■■□□ 2.14
GTF2A1-201ENST00000298173 SLC16A2P36021 539 aa28.44■■■□□ 2.14
GTF2A1-201ENST00000298173 KIF23Q02241 960 aaPredicted RBP28.44■■■□□ 2.14
GTF2A1-201ENST00000298173 MAP1SQ66K74 1059 aaPredicted RBP28.44■■■□□ 2.14
GTF2A1-201ENST00000298173 PIGSQ96S52 555 aa28.44■■■□□ 2.14
GTF2A1-201ENST00000298173 SH3GLB2Q9NR46 395 aa28.44■■■□□ 2.14
GTF2A1-201ENST00000298173 KCNJ14Q9UNX9 436 aa28.44■■■□□ 2.14
GTF2A1-201ENST00000298173 OTOFQ9HC10 1997 aa28.44■■■□□ 2.14
GTF2A1-201ENST00000298173 AS3MTQ9HBK9 375 aa28.43■■■□□ 2.14
GTF2A1-201ENST00000298173 NMRK2Q9NPI5 230 aa28.43■■■□□ 2.14
GTF2A1-201ENST00000298173 USP17L10C9JJH3 530 aa28.42■■■□□ 2.14
GTF2A1-201ENST00000298173 U2AF2P26368 475 aaKnown RBP eCLIP28.42■■■□□ 2.14
GTF2A1-201ENST00000298173 IREB2P48200 963 aaKnown RBP28.42■■■□□ 2.14
GTF2A1-201ENST00000298173 MCTP1Q6DN14 999 aa28.42■■■□□ 2.14
GTF2A1-201ENST00000298173 LDHDQ86WU2 507 aa28.42■■■□□ 2.14
GTF2A1-201ENST00000298173 ZNF280CQ8ND82 737 aa28.42■■■□□ 2.14
GTF2A1-201ENST00000298173 SNCAIPQ9Y6H5 919 aa28.42■■■□□ 2.14
GTF2A1-201ENST00000298173 KIF28PB7ZC32 967 aa28.42■■■□□ 2.14
GTF2A1-201ENST00000298173 PLA2G6O60733 806 aa28.42■■■□□ 2.14
GTF2A1-201ENST00000298173 SPP2Q13103 211 aa28.42■■■□□ 2.14
GTF2A1-201ENST00000298173 VGLL4Q14135 290 aa28.42■■■□□ 2.14
GTF2A1-201ENST00000298173 FAM173BQ6P4H8 233 aa28.42■■■□□ 2.14
GTF2A1-201ENST00000298173 FAM177A1Q8N128 213 aaPredicted RBP28.42■■■□□ 2.14
GTF2A1-201ENST00000298173 BARHL2Q9NY43 387 aa28.42■■■□□ 2.14
GTF2A1-201ENST00000298173 ZHX2Q9Y6X8 837 aa28.42■■■□□ 2.14
GTF2A1-201ENST00000298173 MYH15Q9Y2K3 1946 aa28.41■■■□□ 2.14
GTF2A1-201ENST00000298173 TMEM232C9JQI7 657 aa28.41■■■□□ 2.14
GTF2A1-201ENST00000298173 BACE1P56817 501 aa28.41■■■□□ 2.14
GTF2A1-201ENST00000298173 NPY5RQ15761 445 aa28.41■■■□□ 2.14
GTF2A1-201ENST00000298173 ZYXQ15942 572 aaKnown RBP28.41■■■□□ 2.14
GTF2A1-201ENST00000298173 FOXD4L6Q3SYB3 417 aaPredicted RBP28.41■■■□□ 2.14
GTF2A1-201ENST00000298173 WWC2Q6AWC2 1192 aa28.41■■■□□ 2.14
GTF2A1-201ENST00000298173 FOXD4L3Q6VB84 417 aaPredicted RBP28.41■■■□□ 2.14
GTF2A1-201ENST00000298173 LPAR1Q92633 364 aa28.41■■■□□ 2.14
GTF2A1-201ENST00000298173 FEZ1Q99689 392 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms