RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 VIL1P09327 827 aaKnown RBP15.59■□□□□ 0.09
CHMP4C-201ENST00000297265 EIF6P56537 245 aaKnown RBP15.59■□□□□ 0.09
CHMP4C-201ENST00000297265 SHROOM1Q2M3G4 852 aaPredicted RBP15.59■□□□□ 0.09
CHMP4C-201ENST00000297265 CFAP100Q494V2 611 aa15.59■□□□□ 0.09
CHMP4C-201ENST00000297265 LONRF3Q496Y0 759 aa15.59■□□□□ 0.09
CHMP4C-201ENST00000297265 USP49Q70CQ1 688 aa15.59■□□□□ 0.09
CHMP4C-201ENST00000297265 METTL16Q86W50 562 aaKnown RBP15.59■□□□□ 0.09
CHMP4C-201ENST00000297265 FOXP4Q8IVH2 680 aaPredicted RBP15.59■□□□□ 0.09
CHMP4C-201ENST00000297265 BLIDQ8IZY5 108 aa15.59■□□□□ 0.09
CHMP4C-201ENST00000297265 TRIM44Q96DX7 344 aaPredicted RBP15.59■□□□□ 0.09
CHMP4C-201ENST00000297265 DHX36Q9H2U1 1008 aaKnown RBP15.59■□□□□ 0.09
CHMP4C-201ENST00000297265 RIOX1Q9H6W3 641 aa15.59■□□□□ 0.09
CHMP4C-201ENST00000297265 ZNF277Q9NRM2 450 aaPredicted RBP15.59■□□□□ 0.09
CHMP4C-201ENST00000297265 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.59■□□□□ 0.09
CHMP4C-201ENST00000297265 KCNH3Q9ULD8 1083 aa15.59■□□□□ 0.09
CHMP4C-201ENST00000297265 FAM196BA6NMK8 535 aa15.58■□□□□ 0.08
CHMP4C-201ENST00000297265 HLA-DOAP06340 250 aa15.58■□□□□ 0.08
CHMP4C-201ENST00000297265 MDM2Q00987 491 aaPredicted RBP15.58■□□□□ 0.08
CHMP4C-201ENST00000297265 HS1BP3Q53T59 392 aa15.58■□□□□ 0.08
CHMP4C-201ENST00000297265 TATDN1Q6P1N9 297 aa15.58■□□□□ 0.08
CHMP4C-201ENST00000297265 PIK3AP1Q6ZUJ8 805 aa15.58■□□□□ 0.08
CHMP4C-201ENST00000297265 BRMS1Q9HCU9 246 aa15.58■□□□□ 0.08
CHMP4C-201ENST00000297265 RTN4Q9NQC3 1192 aaKnown RBP15.58■□□□□ 0.08
CHMP4C-201ENST00000297265 CLIP2Q9UDT6 1046 aa15.58■□□□□ 0.08
CHMP4C-201ENST00000297265 PCDHA4Q9UN74 947 aa15.58■□□□□ 0.08
CHMP4C-201ENST00000297265 PSMD14O00487 310 aa15.57■□□□□ 0.08
CHMP4C-201ENST00000297265 ZBTB7AO95365 584 aa15.57■□□□□ 0.08
CHMP4C-201ENST00000297265 TTLL1O95922 423 aa15.57■□□□□ 0.08
CHMP4C-201ENST00000297265 STX1AQ16623 288 aa15.57■□□□□ 0.08
CHMP4C-201ENST00000297265 RSBN1LQ6PCB5 846 aaPredicted RBP15.57■□□□□ 0.08
CHMP4C-201ENST00000297265 SIAH1Q8IUQ4 282 aa15.57■□□□□ 0.08
CHMP4C-201ENST00000297265 LRRC47Q8N1G4 583 aaKnown RBP15.57■□□□□ 0.08
CHMP4C-201ENST00000297265 DAGLBQ8NCG7 672 aa15.57■□□□□ 0.08
CHMP4C-201ENST00000297265 UBA5Q9GZZ9 404 aa15.57■□□□□ 0.08
CHMP4C-201ENST00000297265 CSRNP2Q9H175 543 aa15.57■□□□□ 0.08
CHMP4C-201ENST00000297265 PI4KBQ9UBF8 816 aa15.57■□□□□ 0.08
CHMP4C-201ENST00000297265 MYH4Q9Y623 1939 aa15.57■□□□□ 0.08
CHMP4C-201ENST00000297265 ESPNB1AK53 854 aa15.57■□□□□ 0.08
CHMP4C-201ENST00000297265 RAD17O75943 681 aa15.57■□□□□ 0.08
CHMP4C-201ENST00000297265 CAVIN2O95810 425 aa15.57■□□□□ 0.08
CHMP4C-201ENST00000297265 CALML3P27482 149 aa15.57■□□□□ 0.08
CHMP4C-201ENST00000297265 ZNF174Q15697 407 aa15.57■□□□□ 0.08
CHMP4C-201ENST00000297265 TTC38Q5R3I4 469 aa15.57■□□□□ 0.08
CHMP4C-201ENST00000297265 C4orf32Q8N8J7 132 aa15.57■□□□□ 0.08
CHMP4C-201ENST00000297265 RASGRP4Q8TDF6 673 aa15.57■□□□□ 0.08
CHMP4C-201ENST00000297265 ZMYND12Q9H0C1 365 aa15.57■□□□□ 0.08
CHMP4C-201ENST00000297265 TUBE1Q9UJT0 475 aa15.57■□□□□ 0.08
CHMP4C-201ENST00000297265 PCDHA6Q9UN73 950 aa15.57■□□□□ 0.08
CHMP4C-201ENST00000297265 CEP131Q9UPN4 1083 aa15.57■□□□□ 0.08
CHMP4C-201ENST00000297265 PCDHA8Q9Y5H6 950 aa15.57■□□□□ 0.08
CHMP4C-201ENST00000297265 ATRNL1Q5VV63 1379 aa15.56■□□□□ 0.08
CHMP4C-201ENST00000297265 BRCA1P38398 1863 aaKnown RBP15.56■□□□□ 0.08
CHMP4C-201ENST00000297265 TRAPPC10P48553 1259 aa15.56■□□□□ 0.08
CHMP4C-201ENST00000297265 TGFB2P61812 414 aa15.56■□□□□ 0.08
CHMP4C-201ENST00000297265 ATP2C1P98194 919 aaPredicted RBP15.56■□□□□ 0.08
CHMP4C-201ENST00000297265 KRBA2Q6ZNG9 492 aa15.56■□□□□ 0.08
CHMP4C-201ENST00000297265 ELOA2Q8IYF1 753 aaPredicted RBP15.56■□□□□ 0.08
CHMP4C-201ENST00000297265 CCDC17Q96LX7 622 aa15.56■□□□□ 0.08
CHMP4C-201ENST00000297265 PIGSQ96S52 555 aa15.56■□□□□ 0.08
CHMP4C-201ENST00000297265 FRMPD2Q68DX3 1309 aaPredicted RBP15.55■□□□□ 0.08
CHMP4C-201ENST00000297265 JAG1P78504 1218 aa15.55■□□□□ 0.08
CHMP4C-201ENST00000297265 PTGDRQ13258 359 aa15.55■□□□□ 0.08
CHMP4C-201ENST00000297265 IL17AQ16552 155 aa15.55■□□□□ 0.08
CHMP4C-201ENST00000297265 HEATR3Q7Z4Q2 680 aa15.55■□□□□ 0.08
CHMP4C-201ENST00000297265 DHX40Q8IX18 779 aaKnown RBP15.55■□□□□ 0.08
CHMP4C-201ENST00000297265 LARGE2Q8N3Y3 721 aa15.55■□□□□ 0.08
CHMP4C-201ENST00000297265 VPS33BQ9H267 617 aa15.55■□□□□ 0.08
CHMP4C-201ENST00000297265 ZBTB12Q9Y330 459 aaPredicted RBP15.55■□□□□ 0.08
CHMP4C-201ENST00000297265 UTRNP46939 3433 aa15.55■□□□□ 0.08
CHMP4C-201ENST00000297265 A0A087X0B3 334 aa15.54■□□□□ 0.08
CHMP4C-201ENST00000297265 SPDYE2BA6NHP3 402 aa15.54■□□□□ 0.08
CHMP4C-201ENST00000297265 FOXN1O15353 648 aa15.54■□□□□ 0.08
CHMP4C-201ENST00000297265 ENTPD3O75355 529 aa15.54■□□□□ 0.08
CHMP4C-201ENST00000297265 SPDYE6P0CI01 402 aa15.54■□□□□ 0.08
CHMP4C-201ENST00000297265 RRP1BQ14684 758 aaKnown RBP15.54■□□□□ 0.08
CHMP4C-201ENST00000297265 DPCR1Q3MIW9 517 aa15.54■□□□□ 0.08
CHMP4C-201ENST00000297265 GALNT17Q6IS24 598 aa15.54■□□□□ 0.08
CHMP4C-201ENST00000297265 CCDC125Q86Z20 511 aa15.54■□□□□ 0.08
CHMP4C-201ENST00000297265 FAM177A1Q8N128 213 aaPredicted RBP15.54■□□□□ 0.08
CHMP4C-201ENST00000297265 MKL1Q969V6 931 aa15.54■□□□□ 0.08
CHMP4C-201ENST00000297265 VAT1LQ9HCJ6 419 aa15.54■□□□□ 0.08
CHMP4C-201ENST00000297265 ANO10Q9NW15 660 aa15.54■□□□□ 0.08
CHMP4C-201ENST00000297265 NOL7Q9UMY1 257 aaKnown RBP15.54■□□□□ 0.08
CHMP4C-201ENST00000297265 ATF5Q9Y2D1 282 aaPredicted RBP15.54■□□□□ 0.08
CHMP4C-201ENST00000297265 ZNF543Q08ER8 600 aa15.54■□□□□ 0.08
CHMP4C-201ENST00000297265 PNOCQ13519 176 aa15.54■□□□□ 0.08
CHMP4C-201ENST00000297265 ASPRV1Q53RT3 343 aa15.54■□□□□ 0.08
CHMP4C-201ENST00000297265 EPSTI1Q96J88 318 aa15.54■□□□□ 0.08
CHMP4C-201ENST00000297265 PIM2Q9P1W9 311 aa15.54■□□□□ 0.08
CHMP4C-201ENST00000297265 FER1L6Q2WGJ9 1857 aa15.53■□□□□ 0.08
CHMP4C-201ENST00000297265 POLR2DO15514 142 aaKnown RBP15.53■□□□□ 0.08
CHMP4C-201ENST00000297265 CERKLQ49MI3 558 aaPredicted RBP15.53■□□□□ 0.08
CHMP4C-201ENST00000297265 TTBK2Q6IQ55 1244 aa15.53■□□□□ 0.08
CHMP4C-201ENST00000297265 HOMER1Q86YM7 354 aa15.53■□□□□ 0.08
CHMP4C-201ENST00000297265 CCDC148Q8NFR7 591 aa15.53■□□□□ 0.08
CHMP4C-201ENST00000297265 RRP36Q96EU6 259 aaKnown RBP15.53■□□□□ 0.08
CHMP4C-201ENST00000297265 COL2A1P02458 1487 aaPredicted RBP15.53■□□□□ 0.08
CHMP4C-201ENST00000297265 BIN1O00499 593 aa15.52■□□□□ 0.08
CHMP4C-201ENST00000297265 MPHOSPH10O00566 681 aaKnown RBP15.52■□□□□ 0.08
CHMP4C-201ENST00000297265 ACTN4O43707 911 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms