RNA–Protein interactions for RNA: ENST00000296742.11

CAGE1-201, Transcript of cancer antigen 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAGE1, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-201ENST00000296742 STAG1Q8WVM7 1258 aa14.1□□□□□ -0.15
CAGE1-201ENST00000296742 NSUN4Q96CB9 384 aaKnown RBP14.1□□□□□ -0.15
CAGE1-201ENST00000296742 KRT23Q9C075 422 aa14.1□□□□□ -0.15
CAGE1-201ENST00000296742 GRIK5Q16478 980 aa14.1□□□□□ -0.15
CAGE1-201ENST00000296742 MCTP2Q6DN12 878 aa14.1□□□□□ -0.15
CAGE1-201ENST00000296742 UBAC1Q9BSL1 405 aa14.1□□□□□ -0.15
CAGE1-201ENST00000296742 NFE2L3Q9Y4A8 694 aa14.1□□□□□ -0.15
CAGE1-201ENST00000296742 ERICH2A1L162 156 aa14.09□□□□□ -0.15
CAGE1-201ENST00000296742 PRR29P0C7W0 189 aa14.09□□□□□ -0.15
CAGE1-201ENST00000296742 FAM47AQ5JRC9 791 aa14.09□□□□□ -0.15
CAGE1-201ENST00000296742 SGMS1Q86VZ5 419 aa14.09□□□□□ -0.15
CAGE1-201ENST00000296742 ACBD3Q9H3P7 528 aa14.09□□□□□ -0.15
CAGE1-201ENST00000296742 CNNM2Q9H8M5 875 aa14.09□□□□□ -0.15
CAGE1-201ENST00000296742 QTRT2Q9H974 415 aaKnown RBP14.09□□□□□ -0.15
CAGE1-201ENST00000296742 PCDHA5Q9Y5H7 936 aa14.09□□□□□ -0.15
CAGE1-201ENST00000296742 WDR19Q8NEZ3 1342 aa14.09□□□□□ -0.15
CAGE1-201ENST00000296742 CICQ96RK0 1608 aaPredicted RBP14.09□□□□□ -0.15
CAGE1-201ENST00000296742 LIG3P49916 1009 aa14.09□□□□□ -0.15
CAGE1-201ENST00000296742 DIXDC1Q155Q3 683 aa14.09□□□□□ -0.15
CAGE1-201ENST00000296742 CPLX2Q6PUV4 134 aaKnown RBP14.09□□□□□ -0.15
CAGE1-201ENST00000296742 CCDC91Q7Z6B0 441 aa14.09□□□□□ -0.15
CAGE1-201ENST00000296742 AFAP1L1Q8TED9 768 aa14.09□□□□□ -0.15
CAGE1-201ENST00000296742 CLIC6Q96NY7 704 aa14.09□□□□□ -0.15
CAGE1-201ENST00000296742 DOCK2Q92608 1830 aa14.08□□□□□ -0.15
CAGE1-201ENST00000296742 TNKSO95271 1327 aa14.08□□□□□ -0.15
CAGE1-201ENST00000296742 SPATA31A6Q5VVP1 1343 aa14.08□□□□□ -0.15
CAGE1-201ENST00000296742 CTAGE15A4D2H0 777 aa14.08□□□□□ -0.16
CAGE1-201ENST00000296742 CTAGE8P0CG41 777 aa14.08□□□□□ -0.16
CAGE1-201ENST00000296742 SHC4Q6S5L8 630 aa14.08□□□□□ -0.16
CAGE1-201ENST00000296742 BRAPQ7Z569 592 aa14.08□□□□□ -0.16
CAGE1-201ENST00000296742 CTAGE6Q86UF2 777 aa14.08□□□□□ -0.16
CAGE1-201ENST00000296742 FOXP4Q8IVH2 680 aaPredicted RBP14.08□□□□□ -0.16
CAGE1-201ENST00000296742 CTAGE4Q8IX94 777 aa14.08□□□□□ -0.16
CAGE1-201ENST00000296742 GBP3Q9H0R5 595 aa14.08□□□□□ -0.16
CAGE1-201ENST00000296742 CTAGE9A4FU28 777 aa14.08□□□□□ -0.16
CAGE1-201ENST00000296742 FOXN1O15353 648 aa14.08□□□□□ -0.16
CAGE1-201ENST00000296742 LIFRP42702 1097 aa14.08□□□□□ -0.16
CAGE1-201ENST00000296742 PSEN1P49768 467 aa14.08□□□□□ -0.16
CAGE1-201ENST00000296742 SSRP1Q08945 709 aaKnown RBP14.08□□□□□ -0.16
CAGE1-201ENST00000296742 RTN1Q16799 776 aa14.08□□□□□ -0.16
CAGE1-201ENST00000296742 ZNF827Q17R98 1081 aa14.08□□□□□ -0.16
CAGE1-201ENST00000296742 LONRF3Q496Y0 759 aa14.08□□□□□ -0.16
CAGE1-201ENST00000296742 SPECC1Q5M775 1068 aa14.08□□□□□ -0.16
CAGE1-201ENST00000296742 RAD9BQ6WBX8 426 aa14.08□□□□□ -0.16
CAGE1-201ENST00000296742 METTL16Q86W50 562 aaKnown RBP14.08□□□□□ -0.16
CAGE1-201ENST00000296742 SUGP1Q8IWZ8 645 aaKnown RBP14.08□□□□□ -0.16
CAGE1-201ENST00000296742 GDAP1L1Q96MZ0 367 aa14.08□□□□□ -0.16
CAGE1-201ENST00000296742 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.08□□□□□ -0.16
CAGE1-201ENST00000296742 RABEP2Q9H5N1 569 aa14.08□□□□□ -0.16
CAGE1-201ENST00000296742 MED4Q9NPJ6 270 aa14.08□□□□□ -0.16
CAGE1-201ENST00000296742 MYH2Q9UKX2 1941 aa14.07□□□□□ -0.16
CAGE1-201ENST00000296742 CASZ1Q86V15 1759 aa14.07□□□□□ -0.16
CAGE1-201ENST00000296742 A0A087WUV0 522 aaPredicted RBP14.07□□□□□ -0.16
CAGE1-201ENST00000296742 BTBD18B2RXH4 712 aa14.07□□□□□ -0.16
CAGE1-201ENST00000296742 BMP6P22004 513 aa14.07□□□□□ -0.16
CAGE1-201ENST00000296742 MNAT1P51948 309 aa14.07□□□□□ -0.16
CAGE1-201ENST00000296742 PRR5LQ6MZQ0 368 aa14.07□□□□□ -0.16
CAGE1-201ENST00000296742 SLC35F6Q8N357 371 aa14.07□□□□□ -0.16
CAGE1-201ENST00000296742 NOA1Q8NC60 698 aaKnown RBP14.07□□□□□ -0.16
CAGE1-201ENST00000296742 RIN2Q8WYP3 895 aaPredicted RBP14.07□□□□□ -0.16
CAGE1-201ENST00000296742 ADGRG1Q9Y653 693 aa14.07□□□□□ -0.16
CAGE1-201ENST00000296742 CDKL5O76039 1030 aa14.07□□□□□ -0.16
CAGE1-201ENST00000296742 ERLIN2O94905 339 aa14.07□□□□□ -0.16
CAGE1-201ENST00000296742 AKAP17AQ02040 695 aaKnown RBP14.07□□□□□ -0.16
CAGE1-201ENST00000296742 FMR1Q06787 632 aaKnown RBP eCLIP14.07□□□□□ -0.16
CAGE1-201ENST00000296742 ZNF654Q8IZM8 581 aa14.07□□□□□ -0.16
CAGE1-201ENST00000296742 ENAHQ8N8S7 591 aaPredicted RBP14.07□□□□□ -0.16
CAGE1-201ENST00000296742 MTMR7Q9Y216 660 aa14.07□□□□□ -0.16
CAGE1-201ENST00000296742 MYH13Q9UKX3 1938 aa14.07□□□□□ -0.16
CAGE1-201ENST00000296742 LAMB2P55268 1798 aa14.07□□□□□ -0.16
CAGE1-201ENST00000296742 AKR1B15C9JRZ8 316 aaPredicted RBP14.06□□□□□ -0.16
CAGE1-201ENST00000296742 MMP14P50281 582 aa14.06□□□□□ -0.16
CAGE1-201ENST00000296742 NR5A1Q13285 461 aa14.06□□□□□ -0.16
CAGE1-201ENST00000296742 SLC39A14Q15043 492 aa14.06□□□□□ -0.16
CAGE1-201ENST00000296742 CT47A1Q5JQC4 288 aaPredicted RBP14.06□□□□□ -0.16
CAGE1-201ENST00000296742 DZIP1Q86YF9 867 aaKnown RBP14.06□□□□□ -0.16
CAGE1-201ENST00000296742 TRIM29Q14134 588 aa14.06□□□□□ -0.16
CAGE1-201ENST00000296742 MSL3Q8N5Y2 521 aaKnown RBP14.06□□□□□ -0.16
CAGE1-201ENST00000296742 FANCBQ8NB91 859 aa14.06□□□□□ -0.16
CAGE1-201ENST00000296742 ESR2Q92731 530 aa14.06□□□□□ -0.16
CAGE1-201ENST00000296742 KAT2BQ92831 832 aa14.06□□□□□ -0.16
CAGE1-201ENST00000296742 ANKRD2Q9GZV1 360 aa14.06□□□□□ -0.16
CAGE1-201ENST00000296742 CXorf56Q9H5V9 222 aa14.06□□□□□ -0.16
CAGE1-201ENST00000296742 SAMSN1Q9NSI8 373 aaKnown RBP14.06□□□□□ -0.16
CAGE1-201ENST00000296742 CHD4Q14839 1912 aa14.06□□□□□ -0.16
CAGE1-201ENST00000296742 CACNA1SQ13698 1873 aa14.06□□□□□ -0.16
CAGE1-201ENST00000296742 CPP00450 1065 aa14.05□□□□□ -0.16
CAGE1-201ENST00000296742 USP17L8P0C7I0 530 aa14.05□□□□□ -0.16
CAGE1-201ENST00000296742 GYS1P13807 737 aa14.05□□□□□ -0.16
CAGE1-201ENST00000296742 RNF41Q9H4P4 317 aaPredicted RBP14.05□□□□□ -0.16
CAGE1-201ENST00000296742 DCP1AQ9NPI6 582 aaPredicted RBP14.05□□□□□ -0.16
CAGE1-201ENST00000296742 TRPC5Q9UL62 973 aaPredicted RBP14.05□□□□□ -0.16
CAGE1-201ENST00000296742 C4AP0C0L4 1744 aa14.05□□□□□ -0.16
CAGE1-201ENST00000296742 C4BP0C0L5 1744 aa14.05□□□□□ -0.16
CAGE1-201ENST00000296742 CCT5P48643 541 aa14.05□□□□□ -0.16
CAGE1-201ENST00000296742 NCAPH2Q6IBW4 605 aa14.05□□□□□ -0.16
CAGE1-201ENST00000296742 EP400NLQ6ZTU2 488 aa14.05□□□□□ -0.16
CAGE1-201ENST00000296742 OXER1Q8TDS5 423 aa14.05□□□□□ -0.16
CAGE1-201ENST00000296742 RPGRQ92834 1020 aaKnown RBP14.05□□□□□ -0.16
CAGE1-201ENST00000296742 HPSEQ9Y251 543 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms