RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 WDR78Q5VTH9 848 aa14.24□□□□□ -0.13
HMGB2-201ENST00000296503 POTEEQ6S8J3 1075 aa14.24□□□□□ -0.13
HMGB2-201ENST00000296503 NBPF11Q86T75 865 aa14.24□□□□□ -0.13
HMGB2-201ENST00000296503 TCP11L1Q9NUJ3 509 aa14.24□□□□□ -0.13
HMGB2-201ENST00000296503 FBXO28Q9NVF7 368 aa14.24□□□□□ -0.13
HMGB2-201ENST00000296503 BTBD7Q9P203 1132 aa14.24□□□□□ -0.13
HMGB2-201ENST00000296503 SYNPO2Q9UMS6 1093 aa14.24□□□□□ -0.13
HMGB2-201ENST00000296503 MTMR7Q9Y216 660 aa14.24□□□□□ -0.13
HMGB2-201ENST00000296503 ZSWIM8A7E2V4 1837 aa14.24□□□□□ -0.13
HMGB2-201ENST00000296503 KDM4AO75164 1064 aa14.23□□□□□ -0.13
HMGB2-201ENST00000296503 CNMDO75829 334 aa14.23□□□□□ -0.13
HMGB2-201ENST00000296503 MAPK4P31152 587 aa14.23□□□□□ -0.13
HMGB2-201ENST00000296503 FLT3LGP49771 235 aa14.23□□□□□ -0.13
HMGB2-201ENST00000296503 PLS1Q14651 629 aa14.23□□□□□ -0.13
HMGB2-201ENST00000296503 SLC9C1Q4G0N8 1177 aa14.23□□□□□ -0.13
HMGB2-201ENST00000296503 GMCL1P1Q8NEA9 526 aa14.23□□□□□ -0.13
HMGB2-201ENST00000296503 IL27Q8NEV9 243 aa14.23□□□□□ -0.13
HMGB2-201ENST00000296503 MAP4K1Q92918 833 aa14.23□□□□□ -0.13
HMGB2-201ENST00000296503 ATG4CQ96DT6 458 aa14.23□□□□□ -0.13
HMGB2-201ENST00000296503 ZKSCAN3Q9BRR0 538 aa14.23□□□□□ -0.13
HMGB2-201ENST00000296503 KRT23Q9C075 422 aa14.23□□□□□ -0.13
HMGB2-201ENST00000296503 NEDD4P46934 1319 aa14.23□□□□□ -0.13
HMGB2-201ENST00000296503 MYH4Q9Y623 1939 aa14.23□□□□□ -0.13
HMGB2-201ENST00000296503 B4E1Z4 1266 aa14.23□□□□□ -0.13
HMGB2-201ENST00000296503 CDC45O75419 566 aa14.23□□□□□ -0.13
HMGB2-201ENST00000296503 BMP3P12645 472 aa14.23□□□□□ -0.13
HMGB2-201ENST00000296503 MCCP23508 829 aa14.23□□□□□ -0.13
HMGB2-201ENST00000296503 TRDNQ13061 729 aa14.23□□□□□ -0.13
HMGB2-201ENST00000296503 IQCA1Q86XH1 822 aa14.23□□□□□ -0.13
HMGB2-201ENST00000296503 MB21D1Q8N884 522 aa14.23□□□□□ -0.13
HMGB2-201ENST00000296503 PORCNQ9H237 461 aa14.23□□□□□ -0.13
HMGB2-201ENST00000296503 CNNM2Q9H8M5 875 aa14.23□□□□□ -0.13
HMGB2-201ENST00000296503 BIN2Q9UBW5 565 aaPredicted RBP14.23□□□□□ -0.13
HMGB2-201ENST00000296503 MGAMO43451 1857 aa14.22□□□□□ -0.13
HMGB2-201ENST00000296503 TOP1P11387 765 aaKnown RBP14.22□□□□□ -0.13
HMGB2-201ENST00000296503 NKX2-3Q8TAU0 364 aa14.22□□□□□ -0.13
HMGB2-201ENST00000296503 TTC14Q96N46 770 aa14.22□□□□□ -0.13
HMGB2-201ENST00000296503 SLF1Q9BQI6 1058 aa14.22□□□□□ -0.13
HMGB2-201ENST00000296503 ANO2Q9NQ90 1003 aa14.22□□□□□ -0.13
HMGB2-201ENST00000296503 ZSWIM5Q9P217 1185 aa14.22□□□□□ -0.13
HMGB2-201ENST00000296503 CTDP1Q9Y5B0 961 aaPredicted RBP14.22□□□□□ -0.13
HMGB2-201ENST00000296503 RBM8AQ9Y5S9 174 aaKnown RBP14.22□□□□□ -0.13
HMGB2-201ENST00000296503 CYP21A2P08686 494 aa14.21□□□□□ -0.13
HMGB2-201ENST00000296503 SLC1A4P43007 532 aa14.21□□□□□ -0.13
HMGB2-201ENST00000296503 NT5C2P49902 561 aa14.21□□□□□ -0.13
HMGB2-201ENST00000296503 IKQ13123 557 aaPredicted RBP14.21□□□□□ -0.13
HMGB2-201ENST00000296503 GSE1Q14687 1217 aa14.21□□□□□ -0.13
HMGB2-201ENST00000296503 CCDC178Q5BJE1 867 aa14.21□□□□□ -0.13
HMGB2-201ENST00000296503 PLEKHH3Q7Z736 793 aa14.21□□□□□ -0.13
HMGB2-201ENST00000296503 PRPF38AQ8NAV1 312 aaKnown RBP14.21□□□□□ -0.13
HMGB2-201ENST00000296503 SH3TC2Q8TF17 1288 aa14.21□□□□□ -0.13
HMGB2-201ENST00000296503 KIFC2Q96AC6 838 aa14.21□□□□□ -0.13
HMGB2-201ENST00000296503 TMEM47Q9BQJ4 181 aa14.21□□□□□ -0.13
HMGB2-201ENST00000296503 FEM1BQ9UK73 627 aa14.21□□□□□ -0.13
HMGB2-201ENST00000296503 PPP1R9AQ9ULJ8 1098 aa14.21□□□□□ -0.13
HMGB2-201ENST00000296503 DOCK3Q8IZD9 2030 aa14.21□□□□□ -0.14
HMGB2-201ENST00000296503 TMEM232C9JQI7 657 aa14.21□□□□□ -0.14
HMGB2-201ENST00000296503 ADCY3O60266 1144 aa14.21□□□□□ -0.14
HMGB2-201ENST00000296503 MYCP01106 439 aaPredicted RBP14.21□□□□□ -0.14
HMGB2-201ENST00000296503 GRK4P32298 578 aa14.21□□□□□ -0.14
HMGB2-201ENST00000296503 RCSD1Q6JBY9 416 aa14.21□□□□□ -0.14
HMGB2-201ENST00000296503 GPR142Q7Z601 462 aa14.21□□□□□ -0.14
HMGB2-201ENST00000296503 NUDT12Q9BQG2 462 aa14.21□□□□□ -0.14
HMGB2-201ENST00000296503 MOV10L1Q9BXT6 1211 aaKnown RBP14.21□□□□□ -0.14
HMGB2-201ENST00000296503 LSG1Q9H089 658 aaKnown RBP14.21□□□□□ -0.14
HMGB2-201ENST00000296503 SPATC1LQ9H0A9 340 aa14.21□□□□□ -0.14
HMGB2-201ENST00000296503 GJD2Q9UKL4 321 aa14.21□□□□□ -0.14
HMGB2-201ENST00000296503 VWA5AO00534 786 aa14.2□□□□□ -0.14
HMGB2-201ENST00000296503 ZBED4O75132 1171 aa14.2□□□□□ -0.14
HMGB2-201ENST00000296503 NOVP48745 357 aa14.2□□□□□ -0.14
HMGB2-201ENST00000296503 KCTD1Q719H9 257 aa14.2□□□□□ -0.14
HMGB2-201ENST00000296503 NCAPG2Q86XI2 1143 aa14.2□□□□□ -0.14
HMGB2-201ENST00000296503 CHURC1Q8WUH1 139 aa14.2□□□□□ -0.14
HMGB2-201ENST00000296503 GMCL1Q96IK5 515 aa14.2□□□□□ -0.14
HMGB2-201ENST00000296503 ZSCAN10Q96SZ4 725 aaPredicted RBP14.2□□□□□ -0.14
HMGB2-201ENST00000296503 ADAMTS5Q9UNA0 930 aa14.2□□□□□ -0.14
HMGB2-201ENST00000296503 IVNS1ABPQ9Y6Y0 642 aa14.2□□□□□ -0.14
HMGB2-201ENST00000296503 E7EWF7 191 aa14.19□□□□□ -0.14
HMGB2-201ENST00000296503 CYP2B6P20813 491 aa14.19□□□□□ -0.14
HMGB2-201ENST00000296503 SLC4A3P48751 1232 aa14.19□□□□□ -0.14
HMGB2-201ENST00000296503 TMEM132BQ14DG7 1078 aa14.19□□□□□ -0.14
HMGB2-201ENST00000296503 CCDC96Q2M329 555 aa14.19□□□□□ -0.14
HMGB2-201ENST00000296503 RALYLQ86SE5 291 aaKnown RBP14.19□□□□□ -0.14
HMGB2-201ENST00000296503 DGKHQ86XP1 1220 aa14.19□□□□□ -0.14
HMGB2-201ENST00000296503 ARMC5Q96C12 935 aa14.19□□□□□ -0.14
HMGB2-201ENST00000296503 UBAC1Q9BSL1 405 aa14.19□□□□□ -0.14
HMGB2-201ENST00000296503 ELNP15502 786 aa14.18□□□□□ -0.14
HMGB2-201ENST00000296503 ERCC3P19447 782 aa14.18□□□□□ -0.14
HMGB2-201ENST00000296503 STAT3P40763 770 aa14.18□□□□□ -0.14
HMGB2-201ENST00000296503 STAT2P52630 851 aa14.18□□□□□ -0.14
HMGB2-201ENST00000296503 SOX10P56693 466 aa14.18□□□□□ -0.14
HMGB2-201ENST00000296503 IRF5Q13568 498 aa14.18□□□□□ -0.14
HMGB2-201ENST00000296503 SLAIN1Q8ND83 568 aa14.18□□□□□ -0.14
HMGB2-201ENST00000296503 NCOA7Q8NI08 942 aa14.18□□□□□ -0.14
HMGB2-201ENST00000296503 TMEM106CQ9BVX2 250 aa14.18□□□□□ -0.14
HMGB2-201ENST00000296503 KAT14Q9H8E8 782 aa14.18□□□□□ -0.14
HMGB2-201ENST00000296503 UBXN2AP68543 259 aa14.18□□□□□ -0.14
HMGB2-201ENST00000296503 FAM160B2Q86V87 743 aa14.18□□□□□ -0.14
HMGB2-201ENST00000296503 CPXCR1Q8N123 301 aa14.18□□□□□ -0.14
HMGB2-201ENST00000296503 PXYLP1Q8TE99 480 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms