RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 BRMS1Q9HCU9 246 aa13.41□□□□□ -0.26
RHO-201ENST00000296271 KCNQ5Q9NR82 932 aa13.41□□□□□ -0.26
RHO-201ENST00000296271 MAST2Q6P0Q8 1798 aa13.41□□□□□ -0.26
RHO-201ENST00000296271 SNED1Q8TER0 1413 aa13.41□□□□□ -0.26
RHO-201ENST00000296271 SLFN14P0C7P3 912 aa13.41□□□□□ -0.26
RHO-201ENST00000296271 CDK11BP21127 795 aaKnown RBP13.41□□□□□ -0.26
RHO-201ENST00000296271 SCNN1DP51172 638 aa13.41□□□□□ -0.26
RHO-201ENST00000296271 GSDMDP57764 484 aa13.41□□□□□ -0.26
RHO-201ENST00000296271 PPP4CP60510 307 aa13.41□□□□□ -0.26
RHO-201ENST00000296271 ST5P78524 1137 aa13.41□□□□□ -0.26
RHO-201ENST00000296271 KARSQ15046 597 aaKnown RBP13.41□□□□□ -0.26
RHO-201ENST00000296271 C4orf32Q8N8J7 132 aa13.41□□□□□ -0.26
RHO-201ENST00000296271 EYA3Q99504 573 aa13.41□□□□□ -0.26
RHO-201ENST00000296271 TMX1Q9H3N1 280 aa13.41□□□□□ -0.26
RHO-201ENST00000296271 IMPACTQ9P2X3 320 aa13.41□□□□□ -0.26
RHO-201ENST00000296271 PCDHAC2Q9Y5I4 1007 aa13.41□□□□□ -0.26
RHO-201ENST00000296271 CDK5RAP2Q96SN8 1893 aa13.41□□□□□ -0.26
RHO-201ENST00000296271 FANCGO15287 622 aa13.4□□□□□ -0.26
RHO-201ENST00000296271 ONECUT3O60422 494 aaPredicted RBP13.4□□□□□ -0.26
RHO-201ENST00000296271 ZNF18P17022 549 aa13.4□□□□□ -0.26
RHO-201ENST00000296271 GRM4Q14833 912 aa13.4□□□□□ -0.26
RHO-201ENST00000296271 SH3RF1Q7Z6J0 888 aa13.4□□□□□ -0.26
RHO-201ENST00000296271 DGKHQ86XP1 1220 aa13.4□□□□□ -0.26
RHO-201ENST00000296271 CERS5Q8N5B7 392 aa13.4□□□□□ -0.26
RHO-201ENST00000296271 CERKQ8TCT0 537 aa13.4□□□□□ -0.26
RHO-201ENST00000296271 CEP95Q96GE4 821 aa13.4□□□□□ -0.26
RHO-201ENST00000296271 PDCL3Q9H2J4 239 aa13.4□□□□□ -0.26
RHO-201ENST00000296271 PCDHA6Q9UN73 950 aa13.4□□□□□ -0.26
RHO-201ENST00000296271 PCDHA8Q9Y5H6 950 aa13.4□□□□□ -0.26
RHO-201ENST00000296271 GPR75-ASB3A0A0A6YYF3 556 aa13.4□□□□□ -0.26
RHO-201ENST00000296271 KLRF2D3W0D1 207 aa13.4□□□□□ -0.26
RHO-201ENST00000296271 NEMFO60524 1076 aa13.4□□□□□ -0.26
RHO-201ENST00000296271 KIF5BP33176 963 aa13.4□□□□□ -0.26
RHO-201ENST00000296271 E2F4Q16254 413 aa13.4□□□□□ -0.26
RHO-201ENST00000296271 RBM17Q96I25 401 aaKnown RBP13.4□□□□□ -0.26
RHO-201ENST00000296271 NOL10Q9BSC4 688 aaKnown RBP13.4□□□□□ -0.26
RHO-201ENST00000296271 DDX4Q9NQI0 724 aaKnown RBP13.4□□□□□ -0.26
RHO-201ENST00000296271 FRMPD2Q68DX3 1309 aaPredicted RBP13.4□□□□□ -0.26
RHO-201ENST00000296271 DDX60LQ5H9U9 1706 aaKnown RBP13.39□□□□□ -0.27
RHO-201ENST00000296271 TOP1P11387 765 aaKnown RBP13.39□□□□□ -0.27
RHO-201ENST00000296271 IL1R1P14778 569 aa13.39□□□□□ -0.27
RHO-201ENST00000296271 NCBP1Q09161 790 aaKnown RBP13.39□□□□□ -0.27
RHO-201ENST00000296271 SHROOM1Q2M3G4 852 aaPredicted RBP13.39□□□□□ -0.27
RHO-201ENST00000296271 SYT10Q6XYQ8 523 aa13.39□□□□□ -0.27
RHO-201ENST00000296271 NAV1Q8NEY1 1877 aa13.39□□□□□ -0.27
RHO-201ENST00000296271 USP17L5A8MUK1 530 aa13.39□□□□□ -0.27
RHO-201ENST00000296271 PPP1R3GB7ZBB8 358 aa13.39□□□□□ -0.27
RHO-201ENST00000296271 STXBP3O00186 592 aa13.39□□□□□ -0.27
RHO-201ENST00000296271 MSL1Q68DK7 614 aa13.39□□□□□ -0.27
RHO-201ENST00000296271 CREBRFQ8IUR6 639 aa13.39□□□□□ -0.27
RHO-201ENST00000296271 TMEM139Q8IV31 216 aa13.39□□□□□ -0.27
RHO-201ENST00000296271 FAM177A1Q8N128 213 aaPredicted RBP13.39□□□□□ -0.27
RHO-201ENST00000296271 MLKLQ8NB16 471 aa13.39□□□□□ -0.27
RHO-201ENST00000296271 CPLX3Q8WVH0 158 aa13.39□□□□□ -0.27
RHO-201ENST00000296271 EEF2KMTQ96G04 330 aa13.39□□□□□ -0.27
RHO-201ENST00000296271 ZNF219Q9P2Y4 722 aaPredicted RBP13.39□□□□□ -0.27
RHO-201ENST00000296271 TRPC5Q9UL62 973 aaPredicted RBP13.39□□□□□ -0.27
RHO-201ENST00000296271 PCDHA4Q9UN74 947 aa13.39□□□□□ -0.27
RHO-201ENST00000296271 DAGLAQ9Y4D2 1042 aa13.39□□□□□ -0.27
RHO-201ENST00000296271 PALM3A6NDB9 673 aaPredicted RBP13.38□□□□□ -0.27
RHO-201ENST00000296271 M0R2N6 131 aa13.38□□□□□ -0.27
RHO-201ENST00000296271 CTIFO43310 598 aaKnown RBP13.38□□□□□ -0.27
RHO-201ENST00000296271 ATP2B4P23634 1241 aa13.38□□□□□ -0.27
RHO-201ENST00000296271 GSTO1P78417 241 aa13.38□□□□□ -0.27
RHO-201ENST00000296271 PDXDC2PQ6P474 469 aa13.38□□□□□ -0.27
RHO-201ENST00000296271 APTXQ7Z2E3 356 aaKnown RBP13.38□□□□□ -0.27
RHO-201ENST00000296271 LRRC47Q8N1G4 583 aaKnown RBP13.38□□□□□ -0.27
RHO-201ENST00000296271 CCDC150Q8NCX0 1101 aa13.38□□□□□ -0.27
RHO-201ENST00000296271 CCDC112Q8NEF3 446 aa13.38□□□□□ -0.27
RHO-201ENST00000296271 ENOX1Q8TC92 643 aaKnown RBP13.38□□□□□ -0.27
RHO-201ENST00000296271 FERMT2Q96AC1 680 aa13.38□□□□□ -0.27
RHO-201ENST00000296271 HOOK1Q9UJC3 728 aaKnown RBP13.38□□□□□ -0.27
RHO-201ENST00000296271 ZNF215Q9UL58 517 aaPredicted RBP13.38□□□□□ -0.27
RHO-201ENST00000296271 CTNND2Q9UQB3 1225 aa13.38□□□□□ -0.27
RHO-201ENST00000296271 GDAQ9Y2T3 454 aa13.38□□□□□ -0.27
RHO-201ENST00000296271 A0A0U1RQJ8 604 aa13.38□□□□□ -0.27
RHO-201ENST00000296271 MTF1Q14872 753 aa13.38□□□□□ -0.27
RHO-201ENST00000296271 TXNRD1Q16881 649 aa13.38□□□□□ -0.27
RHO-201ENST00000296271 ATRIPQ8WXE1 791 aa13.38□□□□□ -0.27
RHO-201ENST00000296271 UIMC1Q96RL1 719 aa13.38□□□□□ -0.27
RHO-201ENST00000296271 PIGSQ96S52 555 aa13.38□□□□□ -0.27
RHO-201ENST00000296271 TMEM260Q9NX78 707 aa13.38□□□□□ -0.27
RHO-201ENST00000296271 ROBO3Q96MS0 1386 aa13.37□□□□□ -0.27
RHO-201ENST00000296271 FAM196BA6NMK8 535 aa13.37□□□□□ -0.27
RHO-201ENST00000296271 LDHCP07864 332 aa13.37□□□□□ -0.27
RHO-201ENST00000296271 CACNB3P54284 484 aa13.37□□□□□ -0.27
RHO-201ENST00000296271 C16orf86Q6ZW13 317 aa13.37□□□□□ -0.27
RHO-201ENST00000296271 C15orf52Q6ZUT6 534 aaKnown RBP13.37□□□□□ -0.27
RHO-201ENST00000296271 TC2NQ8N9U0 490 aa13.37□□□□□ -0.27
RHO-201ENST00000296271 ANKS1AQ92625 1134 aa13.37□□□□□ -0.27
RHO-201ENST00000296271 DESI2Q9BSY9 194 aa13.37□□□□□ -0.27
RHO-201ENST00000296271 ADAMTSL1Q8N6G6 1762 aa13.37□□□□□ -0.27
RHO-201ENST00000296271 CCDC194A0A1B0GVG4 234 aa13.36□□□□□ -0.27
RHO-201ENST00000296271 PPEF1O14829 653 aaPredicted RBP13.36□□□□□ -0.27
RHO-201ENST00000296271 AKR1B1P15121 316 aa13.36□□□□□ -0.27
RHO-201ENST00000296271 ADRA2BP18089 450 aa13.36□□□□□ -0.27
RHO-201ENST00000296271 CCT6AP40227 531 aaKnown RBP13.36□□□□□ -0.27
RHO-201ENST00000296271 NAALADL2Q58DX5 795 aa13.36□□□□□ -0.27
RHO-201ENST00000296271 TOGARAM2Q6ZUX3 1019 aa13.36□□□□□ -0.27
RHO-201ENST00000296271 ZFPM1Q8IX07 1006 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms