RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 C6orf229H3BNL8 230 aa17.33■□□□□ 0.36
LRRTM1-201ENST00000295057 RIMBP2O15034 1052 aa17.33■□□□□ 0.36
LRRTM1-201ENST00000295057 CNNM2Q9H8M5 875 aa17.33■□□□□ 0.36
LRRTM1-201ENST00000295057 GGA1Q9UJY5 639 aa17.33■□□□□ 0.36
LRRTM1-201ENST00000295057 SLC12A7Q9Y666 1083 aa17.33■□□□□ 0.36
LRRTM1-201ENST00000295057 GOLGA8AA7E2F4 631 aa17.33■□□□□ 0.36
LRRTM1-201ENST00000295057 RANBP6O60518 1105 aaKnown RBP17.33■□□□□ 0.36
LRRTM1-201ENST00000295057 GUCY2CP25092 1073 aa17.33■□□□□ 0.36
LRRTM1-201ENST00000295057 FMR1Q06787 632 aaKnown RBP eCLIP17.33■□□□□ 0.36
LRRTM1-201ENST00000295057 SPECC1LQ69YQ0 1117 aa17.33■□□□□ 0.36
LRRTM1-201ENST00000295057 SRGAP1Q7Z6B7 1085 aa17.33■□□□□ 0.36
LRRTM1-201ENST00000295057 TRMT44Q8IYL2 757 aaKnown RBP17.33■□□□□ 0.36
LRRTM1-201ENST00000295057 TBC1D16Q8TBP0 767 aa17.33■□□□□ 0.36
LRRTM1-201ENST00000295057 MYCBPQ99417 103 aaPredicted RBP17.33■□□□□ 0.36
LRRTM1-201ENST00000295057 CD209Q9NNX6 404 aa17.33■□□□□ 0.36
LRRTM1-201ENST00000295057 ABCB6Q9NP58 842 aa17.33■□□□□ 0.36
LRRTM1-201ENST00000295057 DCP1AQ9NPI6 582 aaPredicted RBP17.33■□□□□ 0.36
LRRTM1-201ENST00000295057 BAZ2AQ9UIF9 1905 aaKnown RBP17.32■□□□□ 0.36
LRRTM1-201ENST00000295057 PHACTR2O75167 634 aa17.32■□□□□ 0.36
LRRTM1-201ENST00000295057 LDHBP07195 334 aaKnown RBP17.32■□□□□ 0.36
LRRTM1-201ENST00000295057 NOM1Q5C9Z4 860 aaKnown RBP17.32■□□□□ 0.36
LRRTM1-201ENST00000295057 SPECC1Q5M775 1068 aa17.32■□□□□ 0.36
LRRTM1-201ENST00000295057 JAKMIP3Q5VZ66 844 aa17.32■□□□□ 0.36
LRRTM1-201ENST00000295057 NCAPGQ9BPX3 1015 aa17.32■□□□□ 0.36
LRRTM1-201ENST00000295057 NMT2O60551 498 aa17.32■□□□□ 0.36
LRRTM1-201ENST00000295057 HOXA10P31260 410 aaPredicted RBP17.32■□□□□ 0.36
LRRTM1-201ENST00000295057 PSEN1P49768 467 aa17.32■□□□□ 0.36
LRRTM1-201ENST00000295057 ZNF804AQ7Z570 1209 aa17.32■□□□□ 0.36
LRRTM1-201ENST00000295057 PACS2Q86VP3 889 aa17.32■□□□□ 0.36
LRRTM1-201ENST00000295057 SGMS1Q86VZ5 419 aa17.32■□□□□ 0.36
LRRTM1-201ENST00000295057 UTRNP46939 3433 aa17.31■□□□□ 0.36
LRRTM1-201ENST00000295057 USP17L8P0C7I0 530 aa17.31■□□□□ 0.36
LRRTM1-201ENST00000295057 WTAPQ15007 396 aa17.31■□□□□ 0.36
LRRTM1-201ENST00000295057 SH3RF3Q8TEJ3 882 aaPredicted RBP17.31■□□□□ 0.36
LRRTM1-201ENST00000295057 NUP133Q8WUM0 1156 aa17.31■□□□□ 0.36
LRRTM1-201ENST00000295057 PLEKHA4Q9H4M7 779 aa17.31■□□□□ 0.36
LRRTM1-201ENST00000295057 JRKLQ9Y4A0 524 aa17.31■□□□□ 0.36
LRRTM1-201ENST00000295057 BBOX1O75936 387 aa17.31■□□□□ 0.36
LRRTM1-201ENST00000295057 PTPAQ15257 358 aa17.31■□□□□ 0.36
LRRTM1-201ENST00000295057 NTRK3Q16288 839 aa17.31■□□□□ 0.36
LRRTM1-201ENST00000295057 FAM47AQ5JRC9 791 aa17.31■□□□□ 0.36
LRRTM1-201ENST00000295057 HDXQ7Z353 690 aa17.31■□□□□ 0.36
LRRTM1-201ENST00000295057 CNNM3Q8NE01 707 aa17.31■□□□□ 0.36
LRRTM1-201ENST00000295057 BRIP1Q9BX63 1249 aa17.31■□□□□ 0.36
LRRTM1-201ENST00000295057 NFE2L3Q9Y4A8 694 aa17.31■□□□□ 0.36
LRRTM1-201ENST00000295057 PDS5AQ29RF7 1337 aaKnown RBP17.31■□□□□ 0.36
LRRTM1-201ENST00000295057 PPEF1O14829 653 aaPredicted RBP17.3■□□□□ 0.36
LRRTM1-201ENST00000295057 RHOXF2BP0C7M4 288 aa17.3■□□□□ 0.36
LRRTM1-201ENST00000295057 GUCY1A2P33402 732 aa17.3■□□□□ 0.36
LRRTM1-201ENST00000295057 LIFRP42702 1097 aa17.3■□□□□ 0.36
LRRTM1-201ENST00000295057 NLGN1Q8N2Q7 840 aa17.3■□□□□ 0.36
LRRTM1-201ENST00000295057 RHOXF2Q9BQY4 288 aa17.3■□□□□ 0.36
LRRTM1-201ENST00000295057 L1RE1Q9UN81 338 aa17.3■□□□□ 0.36
LRRTM1-201ENST00000295057 TNKSO95271 1327 aa17.3■□□□□ 0.36
LRRTM1-201ENST00000295057 KLRG2A4D1S0 409 aaPredicted RBP17.3■□□□□ 0.36
LRRTM1-201ENST00000295057 TTC31Q49AM3 519 aaPredicted RBP17.3■□□□□ 0.36
LRRTM1-201ENST00000295057 RAD9BQ6WBX8 426 aa17.3■□□□□ 0.36
LRRTM1-201ENST00000295057 HNRNPLLQ8WVV9 542 aaKnown RBP17.3■□□□□ 0.36
LRRTM1-201ENST00000295057 CRNKL1Q9BZJ0 848 aaKnown RBP17.3■□□□□ 0.36
LRRTM1-201ENST00000295057 ANAPC4Q9UJX5 808 aa17.3■□□□□ 0.36
LRRTM1-201ENST00000295057 ATP2B4P23634 1241 aa17.29■□□□□ 0.36
LRRTM1-201ENST00000295057 RESP18Q5W5W9 173 aa17.29■□□□□ 0.36
LRRTM1-201ENST00000295057 WDR66Q8TBY9 1149 aa17.29■□□□□ 0.36
LRRTM1-201ENST00000295057 UBAC1Q9BSL1 405 aa17.29■□□□□ 0.36
LRRTM1-201ENST00000295057 ALG1Q9BT22 464 aa17.29■□□□□ 0.36
LRRTM1-201ENST00000295057 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.29■□□□□ 0.36
LRRTM1-201ENST00000295057 SLC26A6Q9BXS9 759 aa17.29■□□□□ 0.36
LRRTM1-201ENST00000295057 RNF41Q9H4P4 317 aaPredicted RBP17.29■□□□□ 0.36
LRRTM1-201ENST00000295057 SAMSN1Q9NSI8 373 aaKnown RBP17.29■□□□□ 0.36
LRRTM1-201ENST00000295057 MCM9Q9NXL9 1143 aa17.29■□□□□ 0.36
LRRTM1-201ENST00000295057 IVLP07476 585 aa17.29■□□□□ 0.36
LRRTM1-201ENST00000295057 SRGNP10124 158 aa17.29■□□□□ 0.36
LRRTM1-201ENST00000295057 ZNF18P17022 549 aa17.29■□□□□ 0.36
LRRTM1-201ENST00000295057 USP5P45974 858 aa17.29■□□□□ 0.36
LRRTM1-201ENST00000295057 VSNL1P62760 191 aa17.29■□□□□ 0.36
LRRTM1-201ENST00000295057 MED15Q96RN5 788 aa17.29■□□□□ 0.36
LRRTM1-201ENST00000295057 CRAMP1Q96RY5 1269 aa17.29■□□□□ 0.36
LRRTM1-201ENST00000295057 RAB21Q9UL25 225 aa17.29■□□□□ 0.36
LRRTM1-201ENST00000295057 TIAM2Q8IVF5 1701 aa17.28■□□□□ 0.36
LRRTM1-201ENST00000295057 EIF3CLB5ME19 914 aaKnown RBP17.28■□□□□ 0.36
LRRTM1-201ENST00000295057 CCDC175P0C221 793 aa17.28■□□□□ 0.36
LRRTM1-201ENST00000295057 PRR29P0C7W0 189 aa17.28■□□□□ 0.36
LRRTM1-201ENST00000295057 EN1Q05925 392 aaPredicted RBP17.28■□□□□ 0.36
LRRTM1-201ENST00000295057 EZH2Q15910 746 aaKnown RBP17.28■□□□□ 0.36
LRRTM1-201ENST00000295057 ENAHQ8N8S7 591 aaPredicted RBP17.28■□□□□ 0.36
LRRTM1-201ENST00000295057 CPLX3Q8WVH0 158 aa17.28■□□□□ 0.36
LRRTM1-201ENST00000295057 ESR2Q92731 530 aa17.28■□□□□ 0.36
LRRTM1-201ENST00000295057 DYNLL2Q96FJ2 89 aa17.28■□□□□ 0.36
LRRTM1-201ENST00000295057 MAP3K14Q99558 947 aa17.28■□□□□ 0.36
LRRTM1-201ENST00000295057 EIF3CQ99613 913 aaKnown RBP17.28■□□□□ 0.36
LRRTM1-201ENST00000295057 MXD3Q9BW11 206 aa17.28■□□□□ 0.36
LRRTM1-201ENST00000295057 ZNF219Q9P2Y4 722 aaPredicted RBP17.28■□□□□ 0.36
LRRTM1-201ENST00000295057 CDC23Q9UJX2 597 aa17.28■□□□□ 0.36
LRRTM1-201ENST00000295057 KCNH3Q9ULD8 1083 aa17.28■□□□□ 0.36
LRRTM1-201ENST00000295057 ABL1P00519 1130 aa17.28■□□□□ 0.36
LRRTM1-201ENST00000295057 MAGEA9P43362 315 aa17.28■□□□□ 0.36
LRRTM1-201ENST00000295057 SPTY2D1Q68D10 685 aaPredicted RBP17.28■□□□□ 0.36
LRRTM1-201ENST00000295057 MSANTD4Q8NCY6 345 aa17.28■□□□□ 0.36
LRRTM1-201ENST00000295057 CCDC102AQ96A19 550 aa17.28■□□□□ 0.36
LRRTM1-201ENST00000295057 RNF216Q9NWF9 866 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms