RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 MKL1Q969V6 931 aa10.51□□□□□ -0.73
PDPN-201ENST00000294489 PGAP2Q9UHJ9 254 aa10.51□□□□□ -0.73
PDPN-201ENST00000294489 CEP131Q9UPN4 1083 aa10.51□□□□□ -0.73
PDPN-201ENST00000294489 RAD17O75943 681 aa10.5□□□□□ -0.73
PDPN-201ENST00000294489 SCG2P13521 617 aa10.5□□□□□ -0.73
PDPN-201ENST00000294489 KRT2P35908 639 aa10.5□□□□□ -0.73
PDPN-201ENST00000294489 TOB1P50616 345 aaPredicted RBP10.5□□□□□ -0.73
PDPN-201ENST00000294489 ZNF280AP59817 542 aaPredicted RBP10.5□□□□□ -0.73
PDPN-201ENST00000294489 TDRD3Q9H7E2 651 aaKnown RBP10.5□□□□□ -0.73
PDPN-201ENST00000294489 CBX8Q9HC52 389 aa10.5□□□□□ -0.73
PDPN-201ENST00000294489 VPS54Q9P1Q0 977 aa10.5□□□□□ -0.73
PDPN-201ENST00000294489 HDAC9Q9UKV0 1011 aa10.5□□□□□ -0.73
PDPN-201ENST00000294489 ATAD5Q96QE3 1844 aa10.5□□□□□ -0.73
PDPN-201ENST00000294489 FAM237AA0A1B0GTK4 181 aa10.5□□□□□ -0.73
PDPN-201ENST00000294489 CYTH3O43739 400 aa10.5□□□□□ -0.73
PDPN-201ENST00000294489 CUTAO60888 179 aa10.5□□□□□ -0.73
PDPN-201ENST00000294489 ZNF202O95125 648 aa10.5□□□□□ -0.73
PDPN-201ENST00000294489 DNAJC25Q9H1X3 360 aa10.5□□□□□ -0.73
PDPN-201ENST00000294489 ANO10Q9NW15 660 aa10.5□□□□□ -0.73
PDPN-201ENST00000294489 NOL7Q9UMY1 257 aaKnown RBP10.5□□□□□ -0.73
PDPN-201ENST00000294489 TTLL1O95922 423 aa10.49□□□□□ -0.73
PDPN-201ENST00000294489 PFKFB1P16118 471 aa10.49□□□□□ -0.73
PDPN-201ENST00000294489 RPS12P25398 132 aaKnown RBP10.49□□□□□ -0.73
PDPN-201ENST00000294489 NR5A1Q13285 461 aa10.49□□□□□ -0.73
PDPN-201ENST00000294489 LUZP1Q86V48 1076 aa10.49□□□□□ -0.73
PDPN-201ENST00000294489 DAGLBQ8NCG7 672 aa10.49□□□□□ -0.73
PDPN-201ENST00000294489 ZNF70Q9UC06 446 aaPredicted RBP10.49□□□□□ -0.73
PDPN-201ENST00000294489 SYNPO2Q9UMS6 1093 aa10.49□□□□□ -0.73
PDPN-201ENST00000294489 M0R2N6 131 aa10.49□□□□□ -0.73
PDPN-201ENST00000294489 SYKP43405 635 aa10.49□□□□□ -0.73
PDPN-201ENST00000294489 PRELPP51888 382 aa10.49□□□□□ -0.73
PDPN-201ENST00000294489 RBM5P52756 815 aaKnown RBP eCLIP10.49□□□□□ -0.73
PDPN-201ENST00000294489 CACNB3P54284 484 aa10.49□□□□□ -0.73
PDPN-201ENST00000294489 MAP3K10Q02779 954 aa10.49□□□□□ -0.73
PDPN-201ENST00000294489 KRI1Q8N9T8 703 aaKnown RBP10.49□□□□□ -0.73
PDPN-201ENST00000294489 FAM151AQ8WW52 585 aa10.49□□□□□ -0.73
PDPN-201ENST00000294489 RIOX1Q9H6W3 641 aa10.49□□□□□ -0.73
PDPN-201ENST00000294489 CABP5Q9NP86 173 aa10.49□□□□□ -0.73
PDPN-201ENST00000294489 hCG_1642624A0A1W2PR95 340 aa10.49□□□□□ -0.73
PDPN-201ENST00000294489 FZD9O00144 591 aa10.49□□□□□ -0.73
PDPN-201ENST00000294489 PDHBP11177 359 aa10.49□□□□□ -0.73
PDPN-201ENST00000294489 FAM83AQ86UY5 434 aa10.49□□□□□ -0.73
PDPN-201ENST00000294489 OXER1Q8TDS5 423 aa10.49□□□□□ -0.73
PDPN-201ENST00000294489 TIGD1Q96MW7 591 aa10.49□□□□□ -0.73
PDPN-201ENST00000294489 NAT10Q9H0A0 1025 aaKnown RBP10.49□□□□□ -0.73
PDPN-201ENST00000294489 NYAP2Q9P242 653 aa10.49□□□□□ -0.73
PDPN-201ENST00000294489 STX8Q9UNK0 236 aa10.49□□□□□ -0.73
PDPN-201ENST00000294489 GOLGA6L19H0YKK7 550 aa10.48□□□□□ -0.73
PDPN-201ENST00000294489 TBC1D12O60347 775 aa10.48□□□□□ -0.73
PDPN-201ENST00000294489 PDE4CQ08493 712 aa10.48□□□□□ -0.73
PDPN-201ENST00000294489 TNIP1Q15025 636 aa10.48□□□□□ -0.73
PDPN-201ENST00000294489 ASPRV1Q53RT3 343 aa10.48□□□□□ -0.73
PDPN-201ENST00000294489 CIAPIN1Q6FI81 312 aa10.48□□□□□ -0.73
PDPN-201ENST00000294489 KIAA1468Q9P260 1216 aa10.48□□□□□ -0.73
PDPN-201ENST00000294489 HERC5Q9UII4 1024 aaKnown RBP10.48□□□□□ -0.73
PDPN-201ENST00000294489 PARP1P09874 1014 aaKnown RBP10.48□□□□□ -0.73
PDPN-201ENST00000294489 DLGAP5Q15398 846 aa10.48□□□□□ -0.73
PDPN-201ENST00000294489 RESP18Q5W5W9 173 aa10.48□□□□□ -0.73
PDPN-201ENST00000294489 GALNT17Q6IS24 598 aa10.48□□□□□ -0.73
PDPN-201ENST00000294489 SIAH1Q8IUQ4 282 aa10.48□□□□□ -0.73
PDPN-201ENST00000294489 CEP57L1Q8IYX8 460 aa10.48□□□□□ -0.73
PDPN-201ENST00000294489 KLRF2D3W0D1 207 aa10.47□□□□□ -0.73
PDPN-201ENST00000294489 VEGFAP15692 232 aaPredicted RBP10.47□□□□□ -0.73
PDPN-201ENST00000294489 SHC4Q6S5L8 630 aa10.47□□□□□ -0.73
PDPN-201ENST00000294489 BARHL2Q9NY43 387 aa10.47□□□□□ -0.73
PDPN-201ENST00000294489 HPSEQ9Y251 543 aa10.47□□□□□ -0.73
PDPN-201ENST00000294489 ZKSCAN5Q9Y2L8 839 aa10.47□□□□□ -0.73
PDPN-201ENST00000294489 ZBTB12Q9Y330 459 aaPredicted RBP10.47□□□□□ -0.73
PDPN-201ENST00000294489 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.47□□□□□ -0.73
PDPN-201ENST00000294489 TRIM75PA6NK02 468 aa10.47□□□□□ -0.73
PDPN-201ENST00000294489 BECN2A8MW95 431 aa10.47□□□□□ -0.73
PDPN-201ENST00000294489 STXBP3O00186 592 aa10.47□□□□□ -0.73
PDPN-201ENST00000294489 BMP15O95972 392 aa10.47□□□□□ -0.73
PDPN-201ENST00000294489 ATP2B1P20020 1258 aa10.47□□□□□ -0.73
PDPN-201ENST00000294489 NLRP5P59047 1200 aa10.47□□□□□ -0.73
PDPN-201ENST00000294489 TCP10Q12799 353 aa10.47□□□□□ -0.73
PDPN-201ENST00000294489 OGFOD1Q8N543 542 aa10.47□□□□□ -0.73
PDPN-201ENST00000294489 MTMR8Q96EF0 704 aa10.47□□□□□ -0.73
PDPN-201ENST00000294489 CLIC6Q96NY7 704 aa10.47□□□□□ -0.73
PDPN-201ENST00000294489 FAM13BQ9NYF5 915 aa10.47□□□□□ -0.73
PDPN-201ENST00000294489 USP17L5A8MUK1 530 aa10.47□□□□□ -0.73
PDPN-201ENST00000294489 GOLGA6L6A8MZA4 724 aa10.47□□□□□ -0.73
PDPN-201ENST00000294489 hCG_1984214I3L0E3 225 aa10.47□□□□□ -0.73
PDPN-201ENST00000294489 PTPREP23469 700 aa10.47□□□□□ -0.73
PDPN-201ENST00000294489 CERKLQ49MI3 558 aaPredicted RBP10.47□□□□□ -0.73
PDPN-201ENST00000294489 TMEM179Q6ZVK1 233 aa10.47□□□□□ -0.73
PDPN-201ENST00000294489 ZNF713Q8N859 430 aaPredicted RBP10.47□□□□□ -0.73
PDPN-201ENST00000294489 DPF2Q92785 391 aa10.47□□□□□ -0.73
PDPN-201ENST00000294489 KANSL2Q9H9L4 492 aa10.47□□□□□ -0.73
PDPN-201ENST00000294489 PCDHB6Q9Y5E3 794 aa10.47□□□□□ -0.73
PDPN-201ENST00000294489 CALML3P27482 149 aa10.46□□□□□ -0.73
PDPN-201ENST00000294489 ZNF543Q08ER8 600 aa10.46□□□□□ -0.73
PDPN-201ENST00000294489 EARS2Q5JPH6 523 aaKnown RBP10.46□□□□□ -0.73
PDPN-201ENST00000294489 ZNF579Q8NAF0 562 aaKnown RBP10.46□□□□□ -0.73
PDPN-201ENST00000294489 NLGN2Q8NFZ4 835 aa10.46□□□□□ -0.73
PDPN-201ENST00000294489 JDP2Q8WYK2 163 aa10.46□□□□□ -0.73
PDPN-201ENST00000294489 HOOK1Q9UJC3 728 aaKnown RBP10.46□□□□□ -0.73
PDPN-201ENST00000294489 KCNH3Q9ULD8 1083 aa10.46□□□□□ -0.73
PDPN-201ENST00000294489 PSDA5PKW4 1024 aaPredicted RBP10.46□□□□□ -0.74
PDPN-201ENST00000294489 TRAPPC10P48553 1259 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms