RNA–Protein interactions for RNA: ENST00000294256.12

SYVN1-201, Transcript of synoviolin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYVN1, Length 3,048 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-201ENST00000294256 SEMA3EO15041 775 aa19.9■□□□□ 0.78
SYVN1-201ENST00000294256 ATP2C1P98194 919 aaPredicted RBP19.9■□□□□ 0.78
SYVN1-201ENST00000294256 C12orf60Q5U649 245 aa19.9■□□□□ 0.78
SYVN1-201ENST00000294256 UIMC1Q96RL1 719 aa19.9■□□□□ 0.78
SYVN1-201ENST00000294256 USP21Q9UK80 565 aa19.9■□□□□ 0.78
SYVN1-201ENST00000294256 CNTNAP4Q9C0A0 1308 aa19.9■□□□□ 0.78
SYVN1-201ENST00000294256 ARHGAP6O43182 974 aa19.9■□□□□ 0.78
SYVN1-201ENST00000294256 TRIM65Q6PJ69 517 aa19.9■□□□□ 0.78
SYVN1-201ENST00000294256 AMOTL1Q8IY63 956 aa19.9■□□□□ 0.78
SYVN1-201ENST00000294256 RPGRQ92834 1020 aaKnown RBP19.9■□□□□ 0.78
SYVN1-201ENST00000294256 MTRQ99707 1265 aa19.9■□□□□ 0.78
SYVN1-201ENST00000294256 STAT6P42226 847 aa19.89■□□□□ 0.78
SYVN1-201ENST00000294256 PICALMQ13492 652 aa19.89■□□□□ 0.78
SYVN1-201ENST00000294256 SPATA1Q5VX52 437 aa19.89■□□□□ 0.78
SYVN1-201ENST00000294256 SPTY2D1Q68D10 685 aaPredicted RBP19.89■□□□□ 0.78
SYVN1-201ENST00000294256 USP17L2Q6R6M4 530 aa19.89■□□□□ 0.78
SYVN1-201ENST00000294256 TMEM60Q9H2L4 133 aa19.89■□□□□ 0.78
SYVN1-201ENST00000294256 TRIM49BA6NDI0 452 aa19.89■□□□□ 0.77
SYVN1-201ENST00000294256 PPP1R3GB7ZBB8 358 aa19.89■□□□□ 0.77
SYVN1-201ENST00000294256 RIMBP2O15034 1052 aa19.89■□□□□ 0.77
SYVN1-201ENST00000294256 ZSCAN12O43309 604 aa19.89■□□□□ 0.77
SYVN1-201ENST00000294256 CASP14P31944 242 aa19.89■□□□□ 0.77
SYVN1-201ENST00000294256 N4BP3O15049 544 aa19.89■□□□□ 0.77
SYVN1-201ENST00000294256 FGRP09769 529 aa19.89■□□□□ 0.77
SYVN1-201ENST00000294256 NR1I3Q14994 352 aa19.89■□□□□ 0.77
SYVN1-201ENST00000294256 TRIML1Q8N9V2 468 aa19.89■□□□□ 0.77
SYVN1-201ENST00000294256 UBA5Q9GZZ9 404 aa19.89■□□□□ 0.77
SYVN1-201ENST00000294256 AKR1B15C9JRZ8 316 aaPredicted RBP19.88■□□□□ 0.77
SYVN1-201ENST00000294256 CYTH3O43739 400 aa19.88■□□□□ 0.77
SYVN1-201ENST00000294256 RAD21O60216 631 aa19.88■□□□□ 0.77
SYVN1-201ENST00000294256 BTDP43251 543 aa19.88■□□□□ 0.77
SYVN1-201ENST00000294256 WWC2Q6AWC2 1192 aa19.88■□□□□ 0.77
SYVN1-201ENST00000294256 C6orf229H3BNL8 230 aa19.88■□□□□ 0.77
SYVN1-201ENST00000294256 GPSM2P81274 684 aa19.88■□□□□ 0.77
SYVN1-201ENST00000294256 SLC35G1Q2M3R5 365 aa19.88■□□□□ 0.77
SYVN1-201ENST00000294256 CLEC10AQ8IUN9 316 aa19.88■□□□□ 0.77
SYVN1-201ENST00000294256 ZNF397Q8NF99 534 aaPredicted RBP19.88■□□□□ 0.77
SYVN1-201ENST00000294256 BAG3O95817 575 aa19.87■□□□□ 0.77
SYVN1-201ENST00000294256 CASQ1P31415 396 aa19.87■□□□□ 0.77
SYVN1-201ENST00000294256 LETM2Q2VYF4 491 aa19.87■□□□□ 0.77
SYVN1-201ENST00000294256 UBXN4Q92575 508 aa19.87■□□□□ 0.77
SYVN1-201ENST00000294256 TMEM47Q9BQJ4 181 aa19.87■□□□□ 0.77
SYVN1-201ENST00000294256 MRPL44Q9H9J2 332 aaKnown RBP19.87■□□□□ 0.77
SYVN1-201ENST00000294256 ST7Q9NRC1 585 aa19.87■□□□□ 0.77
SYVN1-201ENST00000294256 TOM1O60784 492 aa19.87■□□□□ 0.77
SYVN1-201ENST00000294256 ERCC5P28715 1186 aaPredicted RBP19.87■□□□□ 0.77
SYVN1-201ENST00000294256 TBX2Q13207 712 aaPredicted RBP19.87■□□□□ 0.77
SYVN1-201ENST00000294256 GPIHBP1Q8IV16 184 aa19.87■□□□□ 0.77
SYVN1-201ENST00000294256 TEX11Q8IYF3 940 aa19.87■□□□□ 0.77
SYVN1-201ENST00000294256 SPATA20Q8TB22 786 aa19.87■□□□□ 0.77
SYVN1-201ENST00000294256 MAD2L2Q9UI95 211 aa19.87■□□□□ 0.77
SYVN1-201ENST00000294256 FILIP1LQ4L180 1135 aa19.86■□□□□ 0.77
SYVN1-201ENST00000294256 WDR66Q8TBY9 1149 aa19.86■□□□□ 0.77
SYVN1-201ENST00000294256 CCDC12Q8WUD4 166 aaPredicted RBP19.86■□□□□ 0.77
SYVN1-201ENST00000294256 NELFBQ8WX92 580 aa19.86■□□□□ 0.77
SYVN1-201ENST00000294256 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.86■□□□□ 0.77
SYVN1-201ENST00000294256 GRAPQ13588 217 aa19.86■□□□□ 0.77
SYVN1-201ENST00000294256 TEX35Q5T0J7 233 aa19.86■□□□□ 0.77
SYVN1-201ENST00000294256 SH3RF1Q7Z6J0 888 aa19.86■□□□□ 0.77
SYVN1-201ENST00000294256 GRAPLQ8TC17 118 aaPredicted RBP19.86■□□□□ 0.77
SYVN1-201ENST00000294256 GSDMAQ96QA5 445 aa19.86■□□□□ 0.77
SYVN1-201ENST00000294256 WNK3Q9BYP7 1800 aa19.86■□□□□ 0.77
SYVN1-201ENST00000294256 A0A1B0GTH6 734 aa19.86■□□□□ 0.77
SYVN1-201ENST00000294256 KLRF2D3W0D1 207 aa19.86■□□□□ 0.77
SYVN1-201ENST00000294256 CCP110O43303 1012 aa19.86■□□□□ 0.77
SYVN1-201ENST00000294256 BMP15O95972 392 aa19.86■□□□□ 0.77
SYVN1-201ENST00000294256 PCP11498 1178 aaKnown RBP19.86■□□□□ 0.77
SYVN1-201ENST00000294256 TXLNAP40222 546 aa19.86■□□□□ 0.77
SYVN1-201ENST00000294256 NAPAP54920 295 aa19.86■□□□□ 0.77
SYVN1-201ENST00000294256 DTHD1Q6ZMT9 781 aa19.86■□□□□ 0.77
SYVN1-201ENST00000294256 ZNF804AQ7Z570 1209 aa19.86■□□□□ 0.77
SYVN1-201ENST00000294256 PCDHA4Q9UN74 947 aa19.86■□□□□ 0.77
SYVN1-201ENST00000294256 AHDC1Q5TGY3 1603 aaPredicted RBP19.86■□□□□ 0.77
SYVN1-201ENST00000294256 FRMPD2Q68DX3 1309 aaPredicted RBP19.85■□□□□ 0.77
SYVN1-201ENST00000294256 SLURP2P0DP57 97 aa19.85■□□□□ 0.77
SYVN1-201ENST00000294256 ERCC3P19447 782 aa19.85■□□□□ 0.77
SYVN1-201ENST00000294256 UBA7P41226 1012 aa19.85■□□□□ 0.77
SYVN1-201ENST00000294256 FXR1P51114 621 aaKnown RBP eCLIP19.85■□□□□ 0.77
SYVN1-201ENST00000294256 RAD9BQ6WBX8 426 aa19.85■□□□□ 0.77
SYVN1-201ENST00000294256 NUP88Q99567 741 aaPredicted RBP19.85■□□□□ 0.77
SYVN1-201ENST00000294256 KRT31Q15323 416 aa19.85■□□□□ 0.77
SYVN1-201ENST00000294256 SBK1Q52WX2 424 aa19.85■□□□□ 0.77
SYVN1-201ENST00000294256 JAKMIP3Q5VZ66 844 aa19.85■□□□□ 0.77
SYVN1-201ENST00000294256 EYA3Q99504 573 aa19.85■□□□□ 0.77
SYVN1-201ENST00000294256 STX10O60499 249 aa19.84■□□□□ 0.77
SYVN1-201ENST00000294256 RPN1P04843 607 aaKnown RBP19.84■□□□□ 0.77
SYVN1-201ENST00000294256 ATP2B2Q01814 1243 aa19.84■□□□□ 0.77
SYVN1-201ENST00000294256 E2F4Q16254 413 aa19.84■□□□□ 0.77
SYVN1-201ENST00000294256 MFSD14BQ5SR56 506 aa19.84■□□□□ 0.77
SYVN1-201ENST00000294256 PCDHA6Q9UN73 950 aa19.84■□□□□ 0.77
SYVN1-201ENST00000294256 PCDHA8Q9Y5H6 950 aa19.84■□□□□ 0.77
SYVN1-201ENST00000294256 CCNT1O60563 726 aaKnown RBP19.84■□□□□ 0.77
SYVN1-201ENST00000294256 TFRCP02786 760 aaKnown RBP19.84■□□□□ 0.77
SYVN1-201ENST00000294256 CALML3P27482 149 aa19.84■□□□□ 0.77
SYVN1-201ENST00000294256 PRCPP42785 496 aa19.84■□□□□ 0.77
SYVN1-201ENST00000294256 SYCP1Q15431 976 aa19.84■□□□□ 0.77
SYVN1-201ENST00000294256 VPS72Q15906 364 aa19.84■□□□□ 0.77
SYVN1-201ENST00000294256 PDXDC2PQ6P474 469 aa19.84■□□□□ 0.77
SYVN1-201ENST00000294256 ACRBPQ8NEB7 543 aa19.84■□□□□ 0.77
SYVN1-201ENST00000294256 L2HGDHQ9H9P8 463 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms