RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 PCDHA4Q9UN74 947 aa15.96■□□□□ 0.15
NXF1-201ENST00000294172 PALM3A6NDB9 673 aaPredicted RBP15.96■□□□□ 0.15
NXF1-201ENST00000294172 PLSCR1O15162 318 aa15.96■□□□□ 0.15
NXF1-201ENST00000294172 PDE6BP35913 854 aa15.96■□□□□ 0.15
NXF1-201ENST00000294172 FANCCQ00597 558 aa15.96■□□□□ 0.15
NXF1-201ENST00000294172 TMC6Q7Z403 805 aa15.96■□□□□ 0.15
NXF1-201ENST00000294172 SH3GLB2Q9NR46 395 aa15.96■□□□□ 0.15
NXF1-201ENST00000294172 SNED1Q8TER0 1413 aa15.96■□□□□ 0.14
NXF1-201ENST00000294172 SERPINC1P01008 464 aa15.95■□□□□ 0.14
NXF1-201ENST00000294172 TRAPPC10P48553 1259 aa15.95■□□□□ 0.14
NXF1-201ENST00000294172 USP17L2Q6R6M4 530 aa15.95■□□□□ 0.14
NXF1-201ENST00000294172 FANCLQ9NW38 375 aa15.95■□□□□ 0.14
NXF1-201ENST00000294172 MORC2Q9Y6X9 1032 aaPredicted RBP15.95■□□□□ 0.14
NXF1-201ENST00000294172 PARP1P09874 1014 aaKnown RBP15.95■□□□□ 0.14
NXF1-201ENST00000294172 SKILP12757 684 aa15.95■□□□□ 0.14
NXF1-201ENST00000294172 HSP90AA4PQ58FG1 418 aa15.95■□□□□ 0.14
NXF1-201ENST00000294172 NT5DC1Q5TFE4 455 aa15.95■□□□□ 0.14
NXF1-201ENST00000294172 HOMER1Q86YM7 354 aa15.95■□□□□ 0.14
NXF1-201ENST00000294172 CCDC34Q96HJ3 373 aa15.95■□□□□ 0.14
NXF1-201ENST00000294172 VAT1LQ9HCJ6 419 aa15.95■□□□□ 0.14
NXF1-201ENST00000294172 CCDC194A0A1B0GVG4 234 aa15.94■□□□□ 0.14
NXF1-201ENST00000294172 NEMFO60524 1076 aa15.94■□□□□ 0.14
NXF1-201ENST00000294172 SLFN14P0C7P3 912 aa15.94■□□□□ 0.14
NXF1-201ENST00000294172 CASP1P29466 404 aa15.94■□□□□ 0.14
NXF1-201ENST00000294172 SARSP49591 514 aaKnown RBP15.94■□□□□ 0.14
NXF1-201ENST00000294172 RBM10P98175 930 aaKnown RBP15.94■□□□□ 0.14
NXF1-201ENST00000294172 MASTLQ96GX5 879 aa15.94■□□□□ 0.14
NXF1-201ENST00000294172 USP40Q9NVE5 1235 aa15.94■□□□□ 0.14
NXF1-201ENST00000294172 ANKRD31Q8N7Z5 1873 aa15.94■□□□□ 0.14
NXF1-201ENST00000294172 CDK5RAP2Q96SN8 1893 aa15.94■□□□□ 0.14
NXF1-201ENST00000294172 TOP1P11387 765 aaKnown RBP15.94■□□□□ 0.14
NXF1-201ENST00000294172 UBASH3AP57075 661 aa15.94■□□□□ 0.14
NXF1-201ENST00000294172 GSDMDP57764 484 aa15.94■□□□□ 0.14
NXF1-201ENST00000294172 MORC3Q14149 939 aa15.94■□□□□ 0.14
NXF1-201ENST00000294172 PAGE5Q96GU1 130 aa15.94■□□□□ 0.14
NXF1-201ENST00000294172 LZTS2Q9BRK4 669 aa15.94■□□□□ 0.14
NXF1-201ENST00000294172 DDX4Q9NQI0 724 aaKnown RBP15.94■□□□□ 0.14
NXF1-201ENST00000294172 BARHL2Q9NY43 387 aa15.94■□□□□ 0.14
NXF1-201ENST00000294172 STXBP3O00186 592 aa15.93■□□□□ 0.14
NXF1-201ENST00000294172 IL17AQ16552 155 aa15.93■□□□□ 0.14
NXF1-201ENST00000294172 ZNF772Q68DY9 489 aaPredicted RBP15.93■□□□□ 0.14
NXF1-201ENST00000294172 MLKLQ8NB16 471 aa15.93■□□□□ 0.14
NXF1-201ENST00000294172 FLAD1Q8NFF5 587 aa15.93■□□□□ 0.14
NXF1-201ENST00000294172 CCDC148Q8NFR7 591 aa15.93■□□□□ 0.14
NXF1-201ENST00000294172 IMPACTQ9P2X3 320 aa15.93■□□□□ 0.14
NXF1-201ENST00000294172 PCDHA6Q9UN73 950 aa15.93■□□□□ 0.14
NXF1-201ENST00000294172 SUGT1Q9Y2Z0 365 aa15.93■□□□□ 0.14
NXF1-201ENST00000294172 PCDHA8Q9Y5H6 950 aa15.93■□□□□ 0.14
NXF1-201ENST00000294172 LTBP1Q14766 1721 aa15.93■□□□□ 0.14
NXF1-201ENST00000294172 DDX60LQ5H9U9 1706 aaKnown RBP15.93■□□□□ 0.14
NXF1-201ENST00000294172 LRRC37AA6NMS7 1700 aa15.93■□□□□ 0.14
NXF1-201ENST00000294172 EIF6P56537 245 aaKnown RBP15.93■□□□□ 0.14
NXF1-201ENST00000294172 FMR1Q06787 632 aaKnown RBP eCLIP15.93■□□□□ 0.14
NXF1-201ENST00000294172 CFAP100Q494V2 611 aa15.93■□□□□ 0.14
NXF1-201ENST00000294172 TRMT44Q8IYL2 757 aaKnown RBP15.93■□□□□ 0.14
NXF1-201ENST00000294172 STAMQ92783 540 aa15.93■□□□□ 0.14
NXF1-201ENST00000294172 DPF2Q92785 391 aa15.93■□□□□ 0.14
NXF1-201ENST00000294172 C16orf45Q96MC5 204 aaPredicted RBP15.93■□□□□ 0.14
NXF1-201ENST00000294172 DBNDD1Q9H9R9 158 aa15.93■□□□□ 0.14
NXF1-201ENST00000294172 ZNF219Q9P2Y4 722 aaPredicted RBP15.93■□□□□ 0.14
NXF1-201ENST00000294172 DACH1Q9UI36 760 aa15.93■□□□□ 0.14
NXF1-201ENST00000294172 MYH1P12882 1939 aa15.92■□□□□ 0.14
NXF1-201ENST00000294172 USP17L5A8MUK1 530 aa15.92■□□□□ 0.14
NXF1-201ENST00000294172 NAPAP54920 295 aa15.92■□□□□ 0.14
NXF1-201ENST00000294172 TPD52L1Q16890 204 aaPredicted RBP15.92■□□□□ 0.14
NXF1-201ENST00000294172 INF2Q27J81 1249 aa15.92■□□□□ 0.14
NXF1-201ENST00000294172 OSBPL5Q9H0X9 879 aaPredicted RBP15.92■□□□□ 0.14
NXF1-201ENST00000294172 KCNQ5Q9NR82 932 aa15.92■□□□□ 0.14
NXF1-201ENST00000294172 TRIML1Q8N9V2 468 aa15.91■□□□□ 0.14
NXF1-201ENST00000294172 UBA5Q9GZZ9 404 aa15.91■□□□□ 0.14
NXF1-201ENST00000294172 NFE2L3Q9Y4A8 694 aa15.91■□□□□ 0.14
NXF1-201ENST00000294172 FRMPD2Q68DX3 1309 aaPredicted RBP15.91■□□□□ 0.14
NXF1-201ENST00000294172 M0R2N6 131 aa15.91■□□□□ 0.14
NXF1-201ENST00000294172 AKR1B1P15121 316 aa15.91■□□□□ 0.14
NXF1-201ENST00000294172 CDC25AP30304 524 aa15.91■□□□□ 0.14
NXF1-201ENST00000294172 CCZ1BP86790 482 aa15.91■□□□□ 0.14
NXF1-201ENST00000294172 CCZ1P86791 482 aaPredicted RBP15.91■□□□□ 0.14
NXF1-201ENST00000294172 PTPN21Q16825 1174 aa15.91■□□□□ 0.14
NXF1-201ENST00000294172 C2CD5Q86YS7 1000 aa15.91■□□□□ 0.14
NXF1-201ENST00000294172 CLEC10AQ8IUN9 316 aa15.91■□□□□ 0.14
NXF1-201ENST00000294172 LRRC47Q8N1G4 583 aaKnown RBP15.91■□□□□ 0.14
NXF1-201ENST00000294172 SPATA20Q8TB22 786 aa15.91■□□□□ 0.14
NXF1-201ENST00000294172 RRP36Q96EU6 259 aaKnown RBP15.91■□□□□ 0.14
NXF1-201ENST00000294172 PRIMPOLQ96LW4 560 aa15.91■□□□□ 0.14
NXF1-201ENST00000294172 SPZ1Q9BXG8 430 aa15.91■□□□□ 0.14
NXF1-201ENST00000294172 SEC63Q9UGP8 760 aaKnown RBP15.91■□□□□ 0.14
NXF1-201ENST00000294172 CBFA2T2O43439 604 aa15.9■□□□□ 0.14
NXF1-201ENST00000294172 CDK11BP21127 795 aaKnown RBP15.9■□□□□ 0.14
NXF1-201ENST00000294172 GALNT17Q6IS24 598 aa15.9■□□□□ 0.14
NXF1-201ENST00000294172 CDC42EP5Q6NZY7 148 aa15.9■□□□□ 0.14
NXF1-201ENST00000294172 SH3RF1Q7Z6J0 888 aa15.9■□□□□ 0.14
NXF1-201ENST00000294172 IQUBQ8NA54 791 aa15.9■□□□□ 0.14
NXF1-201ENST00000294172 TEKT1Q969V4 418 aa15.9■□□□□ 0.14
NXF1-201ENST00000294172 KLHL10Q6JEL2 608 aa15.9■□□□□ 0.14
NXF1-201ENST00000294172 ARMCX5Q6P1M9 558 aa15.9■□□□□ 0.14
NXF1-201ENST00000294172 C4orf32Q8N8J7 132 aa15.9■□□□□ 0.14
NXF1-201ENST00000294172 PIGSQ96S52 555 aa15.9■□□□□ 0.14
NXF1-201ENST00000294172 BLZF1Q9H2G9 400 aa15.9■□□□□ 0.14
NXF1-201ENST00000294172 MTMR4Q9NYA4 1195 aa15.9■□□□□ 0.14
NXF1-201ENST00000294172 SERPINB13Q9UIV8 391 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms