RNA–Protein interactions for RNA: ENST00000290399.10

SIM2-201, Transcript of SIM bHLH transcription factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM2, Length 4,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM2-201ENST00000290399 PCDHA12Q9UN75 941 aa20.39■□□□□ 0.85
SIM2-201ENST00000290399 SERPINB2P05120 415 aa20.38■□□□□ 0.85
SIM2-201ENST00000290399 MAGEA1P43355 309 aa20.38■□□□□ 0.85
SIM2-201ENST00000290399 MB21D2Q8IYB1 491 aaPredicted RBP20.38■□□□□ 0.85
SIM2-201ENST00000290399 PSTPIP2Q9H939 334 aa20.38■□□□□ 0.85
SIM2-201ENST00000290399 STK32BQ9NY57 414 aa20.38■□□□□ 0.85
SIM2-201ENST00000290399 RFX7Q2KHR2 1363 aa20.38■□□□□ 0.85
SIM2-201ENST00000290399 ERCC6LQ2NKX8 1250 aa20.38■□□□□ 0.85
SIM2-201ENST00000290399 NLRC4Q9NPP4 1024 aa20.38■□□□□ 0.85
SIM2-201ENST00000290399 BACH1O14867 736 aa20.37■□□□□ 0.85
SIM2-201ENST00000290399 IKBKBO14920 756 aa20.37■□□□□ 0.85
SIM2-201ENST00000290399 RPN1P04843 607 aaKnown RBP20.37■□□□□ 0.85
SIM2-201ENST00000290399 GALNT17Q6IS24 598 aa20.37■□□□□ 0.85
SIM2-201ENST00000290399 IFT81Q8WYA0 676 aa20.37■□□□□ 0.85
SIM2-201ENST00000290399 PLVAPQ9BX97 442 aa20.37■□□□□ 0.85
SIM2-201ENST00000290399 FRMD4BQ9Y2L6 1034 aa20.37■□□□□ 0.85
SIM2-201ENST00000290399 PPP2R2CQ9Y2T4 447 aa20.37■□□□□ 0.85
SIM2-201ENST00000290399 PRDX5P30044 214 aa20.37■□□□□ 0.85
SIM2-201ENST00000290399 LONP1P36776 959 aaKnown RBP20.37■□□□□ 0.85
SIM2-201ENST00000290399 VAV2P52735 878 aa20.37■□□□□ 0.85
SIM2-201ENST00000290399 ZFP91Q96JP5 570 aaPredicted RBP20.37■□□□□ 0.85
SIM2-201ENST00000290399 TSGA10Q9BZW7 698 aa20.37■□□□□ 0.85
SIM2-201ENST00000290399 TAF6LQ9Y6J9 622 aa20.37■□□□□ 0.85
SIM2-201ENST00000290399 COL3A1P02461 1466 aaPredicted RBP20.37■□□□□ 0.85
SIM2-201ENST00000290399 NEDD4P46934 1319 aa20.37■□□□□ 0.85
SIM2-201ENST00000290399 FRMPD1Q5SYB0 1578 aa20.37■□□□□ 0.85
SIM2-201ENST00000290399 TRAPPC10P48553 1259 aa20.37■□□□□ 0.85
SIM2-201ENST00000290399 PSMB7Q99436 277 aa20.37■□□□□ 0.85
SIM2-201ENST00000290399 DIP2AQ14689 1571 aa20.37■□□□□ 0.85
SIM2-201ENST00000290399 PPIP5K2O43314 1243 aa20.37■□□□□ 0.85
SIM2-201ENST00000290399 MAEAQ7L5Y9 396 aa20.37■□□□□ 0.85
SIM2-201ENST00000290399 RIPOR2Q9Y4F9 1068 aa20.37■□□□□ 0.85
SIM2-201ENST00000290399 H7C1D1 291 aa20.36■□□□□ 0.85
SIM2-201ENST00000290399 SLFN14P0C7P3 912 aa20.36■□□□□ 0.85
SIM2-201ENST00000290399 GOLGA8FQ08AF8 430 aa20.36■□□□□ 0.85
SIM2-201ENST00000290399 GOLGA8DPQ0D2H9 430 aa20.36■□□□□ 0.85
SIM2-201ENST00000290399 RGS22Q8NE09 1264 aa20.36■□□□□ 0.85
SIM2-201ENST00000290399 VPS18Q9P253 973 aa20.36■□□□□ 0.85
SIM2-201ENST00000290399 SLC9C1Q4G0N8 1177 aa20.36■□□□□ 0.85
SIM2-201ENST00000290399 GBP2P32456 591 aaPredicted RBP20.36■□□□□ 0.85
SIM2-201ENST00000290399 PDE6BP35913 854 aa20.36■□□□□ 0.85
SIM2-201ENST00000290399 CELF1Q92879 486 aaKnown RBP20.36■□□□□ 0.85
SIM2-201ENST00000290399 MINPP1Q9UNW1 487 aa20.36■□□□□ 0.85
SIM2-201ENST00000290399 CEP170BQ9Y4F5 1589 aaPredicted RBP20.36■□□□□ 0.85
SIM2-201ENST00000290399 DEPDC5O75140 1603 aa20.36■□□□□ 0.85
SIM2-201ENST00000290399 TMEM110-MUSTN1A8MSY1 372 aa20.35■□□□□ 0.85
SIM2-201ENST00000290399 ATP1A3P13637 1013 aa20.35■□□□□ 0.85
SIM2-201ENST00000290399 CAPN2P17655 700 aa20.35■□□□□ 0.85
SIM2-201ENST00000290399 RNASE9P60153 205 aaKnown RBP20.35■□□□□ 0.85
SIM2-201ENST00000290399 DLGAP5Q15398 846 aa20.35■□□□□ 0.85
SIM2-201ENST00000290399 DHX37Q8IY37 1157 aaKnown RBP20.35■□□□□ 0.85
SIM2-201ENST00000290399 PAF1Q8N7H5 531 aa20.35■□□□□ 0.85
SIM2-201ENST00000290399 GOLGA6L7A0A1B0GV03 622 aa20.35■□□□□ 0.85
SIM2-201ENST00000290399 ARHGEF35A5YM69 484 aa20.35■□□□□ 0.85
SIM2-201ENST00000290399 DDX39AO00148 427 aaKnown RBP20.35■□□□□ 0.85
SIM2-201ENST00000290399 PLEKHA8P1O95397 391 aa20.35■□□□□ 0.85
SIM2-201ENST00000290399 ERCC5P28715 1186 aaPredicted RBP20.35■□□□□ 0.85
SIM2-201ENST00000290399 EPSTI1Q96J88 318 aa20.35■□□□□ 0.85
SIM2-201ENST00000290399 NT5C3AQ9H0P0 336 aa20.35■□□□□ 0.85
SIM2-201ENST00000290399 THRAP3Q9Y2W1 955 aaKnown RBP20.35■□□□□ 0.85
SIM2-201ENST00000290399 RRAGAQ7L523 313 aa20.35■□□□□ 0.85
SIM2-201ENST00000290399 CCDC51Q96ER9 411 aa20.35■□□□□ 0.85
SIM2-201ENST00000290399 SLC39A2Q9NP94 309 aa20.35■□□□□ 0.85
SIM2-201ENST00000290399 USP32Q8NFA0 1604 aa20.35■□□□□ 0.85
SIM2-201ENST00000290399 PRPF3O43395 683 aaKnown RBP20.35■□□□□ 0.85
SIM2-201ENST00000290399 SECISBP2LQ93073 1101 aaKnown RBP20.35■□□□□ 0.85
SIM2-201ENST00000290399 GPR101Q96P66 508 aaPredicted RBP20.35■□□□□ 0.85
SIM2-201ENST00000290399 PPLO60437 1756 aa20.35■□□□□ 0.85
SIM2-201ENST00000290399 CERKLQ49MI3 558 aaPredicted RBP20.34■□□□□ 0.85
SIM2-201ENST00000290399 C2CD5Q86YS7 1000 aa20.34■□□□□ 0.85
SIM2-201ENST00000290399 STAG1Q8WVM7 1258 aa20.34■□□□□ 0.85
SIM2-201ENST00000290399 NEURL4Q96JN8 1562 aa20.34■□□□□ 0.85
SIM2-201ENST00000290399 ZNF609O15014 1411 aa20.34■□□□□ 0.85
SIM2-201ENST00000290399 GCOM1H8Y6P7 765 aaPredicted RBP20.34■□□□□ 0.85
SIM2-201ENST00000290399 MYZAPP0CAP1 466 aa20.34■□□□□ 0.85
SIM2-201ENST00000290399 CDC25BP30305 580 aa20.34■□□□□ 0.85
SIM2-201ENST00000290399 RNF187Q5TA31 235 aaPredicted RBP20.34■□□□□ 0.85
SIM2-201ENST00000290399 GJA3Q9Y6H8 435 aa20.34■□□□□ 0.85
SIM2-201ENST00000290399 MAP2P11137 1827 aaKnown RBP20.34■□□□□ 0.85
SIM2-201ENST00000290399 USP17L3A6NCW0 530 aa20.34■□□□□ 0.85
SIM2-201ENST00000290399 USP17L4A6NCW7 530 aa20.34■□□□□ 0.85
SIM2-201ENST00000290399 BBOX1O75936 387 aa20.34■□□□□ 0.85
SIM2-201ENST00000290399 PRPHP41219 470 aa20.34■□□□□ 0.85
SIM2-201ENST00000290399 DNM2P50570 870 aa20.34■□□□□ 0.85
SIM2-201ENST00000290399 TYW1BQ6NUM6 668 aa20.34■□□□□ 0.85
SIM2-201ENST00000290399 USP17L1Q7RTZ2 530 aa20.34■□□□□ 0.85
SIM2-201ENST00000290399 HDXQ7Z353 690 aa20.34■□□□□ 0.85
SIM2-201ENST00000290399 NLGN1Q8N2Q7 840 aa20.34■□□□□ 0.85
SIM2-201ENST00000290399 ALDH8A1Q9H2A2 487 aaPredicted RBP20.34■□□□□ 0.85
SIM2-201ENST00000290399 MAN1B1Q9UKM7 699 aa20.34■□□□□ 0.85
SIM2-201ENST00000290399 PCDHA4Q9UN74 947 aa20.34■□□□□ 0.85
SIM2-201ENST00000290399 SRPRBQ9Y5M8 271 aaKnown RBP20.34■□□□□ 0.85
SIM2-201ENST00000290399 KCNQ2O43526 872 aa20.33■□□□□ 0.85
SIM2-201ENST00000290399 TRIM37O94972 964 aa20.33■□□□□ 0.85
SIM2-201ENST00000290399 TMEM131LA2VDJ0 1609 aa20.33■□□□□ 0.85
SIM2-201ENST00000290399 PXDNLA1KZ92 1463 aa20.33■□□□□ 0.85
SIM2-201ENST00000290399 CDC27P30260 824 aa20.33■□□□□ 0.85
SIM2-201ENST00000290399 TUBB2AQ13885 445 aa20.33■□□□□ 0.85
SIM2-201ENST00000290399 PRR16Q569H4 304 aa20.33■□□□□ 0.85
SIM2-201ENST00000290399 USP17L2Q6R6M4 530 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms