RNA–Protein interactions for RNA: ENST00000289495.7

PPP1R9A-201, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 3,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-201ENST00000289495 SBK1Q52WX2 424 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 TRAPPC3LQ5T215 181 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 SYT10Q6XYQ8 523 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 NYAP1Q6ZVC0 841 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 SMIM5Q71RC9 77 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 CERS3Q8IU89 383 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 CCDC47Q96A33 483 aaKnown RBP5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 ERO1AQ96HE7 468 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 LEMD3Q9Y2U8 911 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 CACNA1SQ13698 1873 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 MAST2Q6P0Q8 1798 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 ARHGAP6O43182 974 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 ACTN4O43707 911 aaKnown RBP5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 SLFN14P0C7P3 912 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 ERCC5P28715 1186 aaPredicted RBP5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 ST5P78524 1137 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 GRAPQ13588 217 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 MORC3Q14149 939 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 FCHSD1Q86WN1 690 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 ZNF710Q8N1W2 664 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 PNMA1Q8ND90 353 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 GRAPLQ8TC17 118 aaPredicted RBP5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 CTAGE1Q96RT6 745 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 RMND1Q9NWS8 449 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 STX8Q9UNK0 236 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 WTIPA6NIX2 430 aaPredicted RBP5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 SMIM22K7EJ46 135 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 NMT2O60551 498 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 IGSF3O75054 1194 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 USP17L8P0C7I0 530 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 NCBP1Q09161 790 aaKnown RBP5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 PTGDRQ13258 359 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 PKN1Q16512 942 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 CT47A1Q5JQC4 288 aaPredicted RBP5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 SPECC1LQ69YQ0 1117 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 CREBRFQ8IUR6 639 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 SLF2Q8IX21 1173 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 BLIDQ8IZY5 108 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 CCDC12Q8WUD4 166 aaPredicted RBP5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 DPF2Q92785 391 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 BAG1Q99933 345 aaPredicted RBP5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 USP21Q9UK80 565 aa5.5□□□□□ -1.53
PPP1R9A-201ENST00000289495 TMEM232C9JQI7 657 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 UFL1O94874 794 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 STAT6P42226 847 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 STX17P56962 302 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 SPAG1Q07617 926 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 PFKFB3Q16875 520 aaPredicted RBP5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 SOGA3Q5TF21 947 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 HEATR3Q7Z4Q2 680 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 SRBD1Q8N5C6 995 aaKnown RBP5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 ARHGEF1Q92888 912 aaKnown RBP5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 EPSTI1Q96J88 318 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 GSDMAQ96QA5 445 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 DNAI1Q9UI46 699 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 MORC2Q9Y6X9 1032 aaPredicted RBP5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 A0A1B0GUL6 1792 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 LAMB1P07942 1786 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 TAF1P21675 1872 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 CCDC88AQ3V6T2 1871 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 FGRP09769 529 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 ATP2C1P98194 919 aaPredicted RBP5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 STIM1Q13586 685 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 RRAGBQ5VZM2 374 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 E4F1Q66K89 784 aaPredicted RBP5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 ZNF397Q8NF99 534 aaPredicted RBP5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 TGFBRAP1Q8WUH2 860 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 ANKRD7Q92527 254 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 KCND1Q9NSA2 647 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 SEC63Q9UGP8 760 aaKnown RBP5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 ZNF215Q9UL58 517 aaPredicted RBP5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 CTNND2Q9UQB3 1225 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 ZNF831Q5JPB2 1677 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 URI1O94763 535 aaPredicted RBP5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 ETF1P62495 437 aaKnown RBP5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 FMR1Q06787 632 aaKnown RBP eCLIP5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 FUT2Q10981 343 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 DSG2Q14126 1118 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 NT5DC1Q5TFE4 455 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 SPATA1Q5VX52 437 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 USP49Q70CQ1 688 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 DGKHQ86XP1 1220 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 MAPKAPK5Q8IW41 473 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 TEX11Q8IYF3 940 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 FAM177A1Q8N128 213 aaPredicted RBP5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 GPKOWQ92917 476 aaPredicted RBP eCLIP5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 PAGE5Q96GU1 130 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 ARGLU1Q9NWB6 273 aaPredicted RBP5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 SAP30BPQ9UHR5 308 aaKnown RBP5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 COL4A1P02462 1669 aa5.49□□□□□ -1.53
PPP1R9A-201ENST00000289495 PES1O00541 588 aaKnown RBP5.48□□□□□ -1.53
PPP1R9A-201ENST00000289495 UBA7P41226 1012 aa5.48□□□□□ -1.53
PPP1R9A-201ENST00000289495 MDM2Q00987 491 aaPredicted RBP5.48□□□□□ -1.53
PPP1R9A-201ENST00000289495 C12orf60Q5U649 245 aa5.48□□□□□ -1.53
PPP1R9A-201ENST00000289495 FOXP4Q8IVH2 680 aaPredicted RBP5.48□□□□□ -1.53
PPP1R9A-201ENST00000289495 SH3RF3Q8TEJ3 882 aaPredicted RBP5.48□□□□□ -1.53
PPP1R9A-201ENST00000289495 ZNF384Q8TF68 577 aa5.48□□□□□ -1.53
PPP1R9A-201ENST00000289495 LZTS2Q9BRK4 669 aa5.48□□□□□ -1.53
PPP1R9A-201ENST00000289495 SH3GLB2Q9NR46 395 aa5.48□□□□□ -1.53
PPP1R9A-201ENST00000289495 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms