RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 P3H4Q92791 437 aa19.37■□□□□ 0.69
PCDHA13-201ENST00000289272 THEGQ9P2T0 379 aa19.37■□□□□ 0.69
PCDHA13-201ENST00000289272 NPHP4O75161 1426 aaPredicted RBP19.37■□□□□ 0.69
PCDHA13-201ENST00000289272 MAP7D1Q3KQU3 841 aa19.37■□□□□ 0.69
PCDHA13-201ENST00000289272 CCDC197Q8NCU1 140 aa19.37■□□□□ 0.69
PCDHA13-201ENST00000289272 CALUO43852 315 aaPredicted RBP19.37■□□□□ 0.69
PCDHA13-201ENST00000289272 PDE6BP35913 854 aa19.37■□□□□ 0.69
PCDHA13-201ENST00000289272 ADKP55263 362 aaKnown RBP19.37■□□□□ 0.69
PCDHA13-201ENST00000289272 CCDC25Q86WR0 208 aa19.37■□□□□ 0.69
PCDHA13-201ENST00000289272 FNBP4Q8N3X1 1017 aaPredicted RBP19.37■□□□□ 0.69
PCDHA13-201ENST00000289272 KIFAP3Q92845 792 aa19.37■□□□□ 0.69
PCDHA13-201ENST00000289272 TAB2Q9NYJ8 693 aa19.37■□□□□ 0.69
PCDHA13-201ENST00000289272 ZNF532Q9HCE3 1301 aa19.37■□□□□ 0.69
PCDHA13-201ENST00000289272 KAT6BQ8WYB5 2073 aa19.36■□□□□ 0.69
PCDHA13-201ENST00000289272 ARID4AP29374 1257 aaPredicted RBP19.36■□□□□ 0.69
PCDHA13-201ENST00000289272 CCDC63Q8NA47 563 aa19.36■□□□□ 0.69
PCDHA13-201ENST00000289272 PPANQ9NQ55 473 aaKnown RBP19.36■□□□□ 0.69
PCDHA13-201ENST00000289272 CHUKO15111 745 aa19.36■□□□□ 0.69
PCDHA13-201ENST00000289272 TROVE2P10155 538 aaKnown RBP eCLIP19.36■□□□□ 0.69
PCDHA13-201ENST00000289272 BICD1Q96G01 975 aa19.36■□□□□ 0.69
PCDHA13-201ENST00000289272 PANX2Q96RD6 677 aa19.36■□□□□ 0.69
PCDHA13-201ENST00000289272 MAGEF1Q9HAY2 307 aa19.36■□□□□ 0.69
PCDHA13-201ENST00000289272 POLR3EQ9NVU0 708 aa19.36■□□□□ 0.69
PCDHA13-201ENST00000289272 ARHGEF2Q92974 986 aaKnown RBP19.36■□□□□ 0.69
PCDHA13-201ENST00000289272 PARD6BQ9BYG5 372 aa19.36■□□□□ 0.69
PCDHA13-201ENST00000289272 Q9H521 79 aa19.36■□□□□ 0.69
PCDHA13-201ENST00000289272 CEP104O60308 925 aa19.36■□□□□ 0.69
PCDHA13-201ENST00000289272 HSP90AA5PQ58FG0 334 aa19.36■□□□□ 0.69
PCDHA13-201ENST00000289272 TRIM4Q9C037 500 aa19.36■□□□□ 0.69
PCDHA13-201ENST00000289272 ARID5AQ03989 594 aa19.35■□□□□ 0.69
PCDHA13-201ENST00000289272 SPATA5Q8NB90 893 aa19.35■□□□□ 0.69
PCDHA13-201ENST00000289272 USP28Q96RU2 1077 aa19.35■□□□□ 0.69
PCDHA13-201ENST00000289272 RNF17Q9BXT8 1623 aaKnown RBP19.35■□□□□ 0.69
PCDHA13-201ENST00000289272 TNFAIP3P21580 790 aa19.35■□□□□ 0.69
PCDHA13-201ENST00000289272 KCNJ6P48051 423 aa19.35■□□□□ 0.69
PCDHA13-201ENST00000289272 VPS52Q8N1B4 723 aa19.35■□□□□ 0.69
PCDHA13-201ENST00000289272 PHKBQ93100 1093 aa19.35■□□□□ 0.69
PCDHA13-201ENST00000289272 CETN3O15182 167 aa19.35■□□□□ 0.69
PCDHA13-201ENST00000289272 UFL1O94874 794 aa19.35■□□□□ 0.69
PCDHA13-201ENST00000289272 CCDC14Q49A88 953 aa19.35■□□□□ 0.69
PCDHA13-201ENST00000289272 HHATQ5VTY9 493 aa19.35■□□□□ 0.69
PCDHA13-201ENST00000289272 TEX11Q8IYF3 940 aa19.35■□□□□ 0.69
PCDHA13-201ENST00000289272 CEP120Q8N960 986 aa19.35■□□□□ 0.69
PCDHA13-201ENST00000289272 BPIFA3Q9BQP9 254 aa19.35■□□□□ 0.69
PCDHA13-201ENST00000289272 RCOR1Q9UKL0 485 aa19.35■□□□□ 0.69
PCDHA13-201ENST00000289272 TBC1D22AQ8WUA7 517 aa19.35■□□□□ 0.69
PCDHA13-201ENST00000289272 SUDS3Q9H7L9 328 aaPredicted RBP19.35■□□□□ 0.69
PCDHA13-201ENST00000289272 EPN1Q9Y6I3 576 aaPredicted RBP19.35■□□□□ 0.69
PCDHA13-201ENST00000289272 V9GY48 417 aaPredicted RBP19.35■□□□□ 0.69
PCDHA13-201ENST00000289272 KCNJ18B7U540 433 aa19.34■□□□□ 0.69
PCDHA13-201ENST00000289272 KCNJ12Q14500 433 aa19.34■□□□□ 0.69
PCDHA13-201ENST00000289272 TRAF5O00463 557 aa19.34■□□□□ 0.69
PCDHA13-201ENST00000289272 PCDHA7Q9UN72 937 aa19.34■□□□□ 0.69
PCDHA13-201ENST00000289272 SUN1O94901 812 aa19.34■□□□□ 0.69
PCDHA13-201ENST00000289272 PARP1P09874 1014 aaKnown RBP19.34■□□□□ 0.69
PCDHA13-201ENST00000289272 HSPD1P10809 573 aaKnown RBP19.34■□□□□ 0.69
PCDHA13-201ENST00000289272 RUBCNQ92622 972 aa19.34■□□□□ 0.69
PCDHA13-201ENST00000289272 ADCK5Q3MIX3 580 aa19.33■□□□□ 0.69
PCDHA13-201ENST00000289272 LGSNQ5TDP6 509 aa19.33■□□□□ 0.69
PCDHA13-201ENST00000289272 RABGAP1Q9Y3P9 1069 aa19.33■□□□□ 0.69
PCDHA13-201ENST00000289272 TAF5LO75529 589 aa19.33■□□□□ 0.69
PCDHA13-201ENST00000289272 PNOCQ13519 176 aa19.33■□□□□ 0.69
PCDHA13-201ENST00000289272 PROSER3Q2NL68 480 aa19.33■□□□□ 0.69
PCDHA13-201ENST00000289272 CHAMP1Q96JM3 812 aa19.33■□□□□ 0.69
PCDHA13-201ENST00000289272 MYL10Q9BUA6 226 aa19.33■□□□□ 0.69
PCDHA13-201ENST00000289272 CTDSPL2Q05D32 466 aa19.33■□□□□ 0.68
PCDHA13-201ENST00000289272 PEX26Q7Z412 305 aa19.33■□□□□ 0.68
PCDHA13-201ENST00000289272 VSTM4Q8IW00 320 aa19.33■□□□□ 0.68
PCDHA13-201ENST00000289272 FAM114A2Q9NRY5 505 aa19.33■□□□□ 0.68
PCDHA13-201ENST00000289272 CFAP157Q5JU67 520 aa19.33■□□□□ 0.68
PCDHA13-201ENST00000289272 TUBB6Q9BUF5 446 aa19.33■□□□□ 0.68
PCDHA13-201ENST00000289272 USP21Q9UK80 565 aa19.33■□□□□ 0.68
PCDHA13-201ENST00000289272 CDC42BPBQ9Y5S2 1711 aa19.33■□□□□ 0.68
PCDHA13-201ENST00000289272 GLI2P10070 1586 aa19.33■□□□□ 0.68
PCDHA13-201ENST00000289272 FAM13AO94988 1023 aa19.32■□□□□ 0.68
PCDHA13-201ENST00000289272 ADCY9O60503 1353 aa19.32■□□□□ 0.68
PCDHA13-201ENST00000289272 ZNF131P52739 623 aa19.32■□□□□ 0.68
PCDHA13-201ENST00000289272 MORC3Q14149 939 aa19.32■□□□□ 0.68
PCDHA13-201ENST00000289272 SEPT2Q15019 361 aa19.32■□□□□ 0.68
PCDHA13-201ENST00000289272 LZTS2Q9BRK4 669 aa19.32■□□□□ 0.68
PCDHA13-201ENST00000289272 NRBP1Q9UHY1 535 aa19.32■□□□□ 0.68
PCDHA13-201ENST00000289272 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.32■□□□□ 0.68
PCDHA13-201ENST00000289272 SEC31AO94979 1220 aaKnown RBP19.32■□□□□ 0.68
PCDHA13-201ENST00000289272 STX2P32856 288 aa19.32■□□□□ 0.68
PCDHA13-201ENST00000289272 KLHL30Q0D2K2 578 aa19.32■□□□□ 0.68
PCDHA13-201ENST00000289272 EMBQ6PCB8 327 aa19.32■□□□□ 0.68
PCDHA13-201ENST00000289272 GSDMAQ96QA5 445 aa19.32■□□□□ 0.68
PCDHA13-201ENST00000289272 ERCC6L2Q5T890 1561 aa19.32■□□□□ 0.68
PCDHA13-201ENST00000289272 WHAMMQ8TF30 809 aa19.32■□□□□ 0.68
PCDHA13-201ENST00000289272 FRMD4BQ9Y2L6 1034 aa19.32■□□□□ 0.68
PCDHA13-201ENST00000289272 CASP8Q14790 479 aa19.31■□□□□ 0.68
PCDHA13-201ENST00000289272 BBOF1Q8ND07 529 aa19.31■□□□□ 0.68
PCDHA13-201ENST00000289272 OSBPL5Q9H0X9 879 aaPredicted RBP19.31■□□□□ 0.68
PCDHA13-201ENST00000289272 HMGB1P1B2RPK0 211 aaPredicted RBP19.31■□□□□ 0.68
PCDHA13-201ENST00000289272 GTPBP6O43824 516 aaPredicted RBP19.31■□□□□ 0.68
PCDHA13-201ENST00000289272 ALDH1B1P30837 517 aa19.31■□□□□ 0.68
PCDHA13-201ENST00000289272 KLHL7Q8IXQ5 586 aa19.31■□□□□ 0.68
PCDHA13-201ENST00000289272 GRK7Q8WTQ7 553 aa19.31■□□□□ 0.68
PCDHA13-201ENST00000289272 TYW1Q9NV66 732 aaKnown RBP19.31■□□□□ 0.68
PCDHA13-201ENST00000289272 AMFRQ9UKV5 643 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms