RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 BTBD7Q9P203 1132 aa23.38■■□□□ 1.33
TIMP4-201ENST00000287814 RLFQ13129 1914 aa23.38■■□□□ 1.33
TIMP4-201ENST00000287814 REC8O95072 547 aa23.38■■□□□ 1.33
TIMP4-201ENST00000287814 SEC23AQ15436 765 aa23.38■■□□□ 1.33
TIMP4-201ENST00000287814 SAMD1Q6SPF0 538 aaPredicted RBP23.38■■□□□ 1.33
TIMP4-201ENST00000287814 RALYLQ86SE5 291 aaKnown RBP23.38■■□□□ 1.33
TIMP4-201ENST00000287814 ATG4CQ96DT6 458 aa23.38■■□□□ 1.33
TIMP4-201ENST00000287814 GMCL1Q96IK5 515 aa23.38■■□□□ 1.33
TIMP4-201ENST00000287814 ZSWIM8A7E2V4 1837 aa23.37■■□□□ 1.33
TIMP4-201ENST00000287814 BMP3P12645 472 aa23.37■■□□□ 1.33
TIMP4-201ENST00000287814 PSMC4P43686 418 aa23.37■■□□□ 1.33
TIMP4-201ENST00000287814 OTOP1Q7RTM1 612 aa23.37■■□□□ 1.33
TIMP4-201ENST00000287814 CTU1Q7Z7A3 348 aaKnown RBP23.37■■□□□ 1.33
TIMP4-201ENST00000287814 TRIM47Q96LD4 638 aa23.37■■□□□ 1.33
TIMP4-201ENST00000287814 UBAC1Q9BSL1 405 aa23.37■■□□□ 1.33
TIMP4-201ENST00000287814 RNF20Q5VTR2 975 aa23.36■■□□□ 1.33
TIMP4-201ENST00000287814 GPRC5AQ8NFJ5 357 aa23.36■■□□□ 1.33
TIMP4-201ENST00000287814 KCNB2Q92953 911 aa23.36■■□□□ 1.33
TIMP4-201ENST00000287814 PPP1R9AQ9ULJ8 1098 aa23.36■■□□□ 1.33
TIMP4-201ENST00000287814 ADAMTS5Q9UNA0 930 aa23.36■■□□□ 1.33
TIMP4-201ENST00000287814 RABGAP1Q9Y3P9 1069 aa23.36■■□□□ 1.33
TIMP4-201ENST00000287814 TRIM17Q9Y577 477 aa23.36■■□□□ 1.33
TIMP4-201ENST00000287814 HSPA4P34932 840 aa23.35■■□□□ 1.33
TIMP4-201ENST00000287814 SLC1A4P43007 532 aa23.35■■□□□ 1.33
TIMP4-201ENST00000287814 ERVK-9P63128 1117 aa23.35■■□□□ 1.33
TIMP4-201ENST00000287814 ERVK-24P63145 666 aa23.35■■□□□ 1.33
TIMP4-201ENST00000287814 ADCK5Q3MIX3 580 aa23.35■■□□□ 1.33
TIMP4-201ENST00000287814 TSGA10IPQ3SY00 556 aa23.35■■□□□ 1.33
TIMP4-201ENST00000287814 CCDC178Q5BJE1 867 aa23.35■■□□□ 1.33
TIMP4-201ENST00000287814 KCTD1Q719H9 257 aa23.35■■□□□ 1.33
TIMP4-201ENST00000287814 GTF3C2Q8WUA4 911 aaPredicted RBP23.35■■□□□ 1.33
TIMP4-201ENST00000287814 USP26Q9BXU7 913 aa23.35■■□□□ 1.33
TIMP4-201ENST00000287814 EFCC1Q9HA90 598 aa23.35■■□□□ 1.33
TIMP4-201ENST00000287814 SENP2Q9HC62 589 aa23.35■■□□□ 1.33
TIMP4-201ENST00000287814 MYPNQ86TC9 1320 aa23.34■■□□□ 1.33
TIMP4-201ENST00000287814 PDHBP11177 359 aa23.34■■□□□ 1.33
TIMP4-201ENST00000287814 KIF22Q14807 665 aa23.34■■□□□ 1.33
TIMP4-201ENST00000287814 IGDCC4Q8TDY8 1250 aa23.34■■□□□ 1.33
TIMP4-201ENST00000287814 SLF1Q9BQI6 1058 aa23.34■■□□□ 1.33
TIMP4-201ENST00000287814 PORCNQ9H237 461 aa23.34■■□□□ 1.33
TIMP4-201ENST00000287814 GPHNQ9NQX3 736 aaPredicted RBP23.34■■□□□ 1.33
TIMP4-201ENST00000287814 TMEM232C9JQI7 657 aa23.33■■□□□ 1.33
TIMP4-201ENST00000287814 IFIT3O14879 490 aaKnown RBP23.33■■□□□ 1.33
TIMP4-201ENST00000287814 FMNL1O95466 1100 aaPredicted RBP23.33■■□□□ 1.33
TIMP4-201ENST00000287814 PNMA1Q8ND90 353 aa23.33■■□□□ 1.33
TIMP4-201ENST00000287814 MCOLN1Q9GZU1 580 aa23.33■■□□□ 1.33
TIMP4-201ENST00000287814 KAT14Q9H8E8 782 aa23.33■■□□□ 1.33
TIMP4-201ENST00000287814 FEM1BQ9UK73 627 aa23.33■■□□□ 1.33
TIMP4-201ENST00000287814 HTTP42858 3142 aa23.33■■□□□ 1.33
TIMP4-201ENST00000287814 PARP14Q460N5 1801 aa23.32■■□□□ 1.32
TIMP4-201ENST00000287814 VWA5AO00534 786 aa23.32■■□□□ 1.32
TIMP4-201ENST00000287814 SNHG28P0DPA3 235 aa23.32■■□□□ 1.32
TIMP4-201ENST00000287814 IFIT1BQ5T764 474 aaKnown RBP23.32■■□□□ 1.32
TIMP4-201ENST00000287814 TTBK2Q6IQ55 1244 aa23.32■■□□□ 1.32
TIMP4-201ENST00000287814 PRPF38AQ8NAV1 312 aaKnown RBP23.32■■□□□ 1.32
TIMP4-201ENST00000287814 DCAF4Q8WV16 495 aa23.32■■□□□ 1.32
TIMP4-201ENST00000287814 ISY1Q9ULR0 285 aaKnown RBP23.32■■□□□ 1.32
TIMP4-201ENST00000287814 SNX14Q9Y5W7 946 aa23.32■■□□□ 1.32
TIMP4-201ENST00000287814 PRC1O43663 620 aa23.32■■□□□ 1.32
TIMP4-201ENST00000287814 SEC24BO95487 1268 aa23.32■■□□□ 1.32
TIMP4-201ENST00000287814 ZKSCAN1P17029 563 aaPredicted RBP23.32■■□□□ 1.32
TIMP4-201ENST00000287814 FCGRTP55899 365 aa23.32■■□□□ 1.32
TIMP4-201ENST00000287814 TMEM132BQ14DG7 1078 aa23.32■■□□□ 1.32
TIMP4-201ENST00000287814 REPS2Q8NFH8 660 aa23.32■■□□□ 1.32
TIMP4-201ENST00000287814 KIFC2Q96AC6 838 aa23.32■■□□□ 1.32
TIMP4-201ENST00000287814 NEK1Q96PY6 1258 aa23.32■■□□□ 1.32
TIMP4-201ENST00000287814 FRMPD2Q68DX3 1309 aaPredicted RBP23.31■■□□□ 1.32
TIMP4-201ENST00000287814 EPB41L2O43491 1005 aaKnown RBP23.31■■□□□ 1.32
TIMP4-201ENST00000287814 MCM5P33992 734 aa23.31■■□□□ 1.32
TIMP4-201ENST00000287814 CCDC96Q2M329 555 aa23.31■■□□□ 1.32
TIMP4-201ENST00000287814 TMEM67Q5HYA8 995 aa23.3■■□□□ 1.32
TIMP4-201ENST00000287814 MB21D1Q8N884 522 aa23.3■■□□□ 1.32
TIMP4-201ENST00000287814 MOV10L1Q9BXT6 1211 aaKnown RBP23.3■■□□□ 1.32
TIMP4-201ENST00000287814 LRRC2Q9BYS8 371 aa23.3■■□□□ 1.32
TIMP4-201ENST00000287814 SPATC1LQ9H0A9 340 aa23.3■■□□□ 1.32
TIMP4-201ENST00000287814 GPCPD1Q9NPB8 672 aa23.3■■□□□ 1.32
TIMP4-201ENST00000287814 A0A0G2JMZ2 1700 aa23.29■■□□□ 1.32
TIMP4-201ENST00000287814 TNPO2O14787 897 aaKnown RBP23.29■■□□□ 1.32
TIMP4-201ENST00000287814 PLA2G6O60733 806 aa23.29■■□□□ 1.32
TIMP4-201ENST00000287814 SLC16A2P36021 539 aa23.29■■□□□ 1.32
TIMP4-201ENST00000287814 STAT2P52630 851 aa23.29■■□□□ 1.32
TIMP4-201ENST00000287814 ZNF543Q08ER8 600 aa23.29■■□□□ 1.32
TIMP4-201ENST00000287814 WTAPQ15007 396 aa23.29■■□□□ 1.32
TIMP4-201ENST00000287814 ARHGEF6Q15052 776 aa23.29■■□□□ 1.32
TIMP4-201ENST00000287814 ZNF214Q9UL59 606 aaPredicted RBP23.29■■□□□ 1.32
TIMP4-201ENST00000287814 GABRQQ9UN88 632 aa23.29■■□□□ 1.32
TIMP4-201ENST00000287814 PTPN22Q9Y2R2 807 aa23.29■■□□□ 1.32
TIMP4-201ENST00000287814 GOLGA8HP0CJ92 632 aa23.28■■□□□ 1.32
TIMP4-201ENST00000287814 CHURC1Q8WUH1 139 aa23.28■■□□□ 1.32
TIMP4-201ENST00000287814 TCEANC2Q96MN5 208 aa23.28■■□□□ 1.32
TIMP4-201ENST00000287814 LY9Q9HBG7 655 aa23.28■■□□□ 1.32
TIMP4-201ENST00000287814 SRRDQ9UH36 339 aa23.28■■□□□ 1.32
TIMP4-201ENST00000287814 ERICH2A1L162 156 aa23.28■■□□□ 1.32
TIMP4-201ENST00000287814 CPA1P15085 419 aa23.28■■□□□ 1.32
TIMP4-201ENST00000287814 EXOSC10Q01780 885 aaKnown RBP23.28■■□□□ 1.32
TIMP4-201ENST00000287814 PRKCZQ05513 592 aa23.28■■□□□ 1.32
TIMP4-201ENST00000287814 IKQ13123 557 aaPredicted RBP23.28■■□□□ 1.32
TIMP4-201ENST00000287814 KRT32Q14532 448 aa23.28■■□□□ 1.32
TIMP4-201ENST00000287814 PLS1Q14651 629 aa23.28■■□□□ 1.32
TIMP4-201ENST00000287814 SART3Q15020 963 aaKnown RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms