RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 AMNQ9BXJ7 453 aa12.53□□□□□ -0.4
USP6NL-201ENST00000277575 BSDC1Q9NW68 430 aaPredicted RBP12.53□□□□□ -0.4
USP6NL-201ENST00000277575 SETD1BQ9UPS6 1966 aaKnown RBP12.53□□□□□ -0.4
USP6NL-201ENST00000277575 PTCH1Q13635 1447 aa12.53□□□□□ -0.4
USP6NL-201ENST00000277575 MMP10P09238 476 aa12.53□□□□□ -0.4
USP6NL-201ENST00000277575 CALCOCO2Q13137 446 aa12.53□□□□□ -0.4
USP6NL-201ENST00000277575 GRAPQ13588 217 aa12.53□□□□□ -0.4
USP6NL-201ENST00000277575 ZNF827Q17R98 1081 aa12.53□□□□□ -0.4
USP6NL-201ENST00000277575 SPICE1Q8N0Z3 855 aa12.53□□□□□ -0.4
USP6NL-201ENST00000277575 GRAPLQ8TC17 118 aaPredicted RBP12.53□□□□□ -0.4
USP6NL-201ENST00000277575 PI4K2BQ8TCG2 481 aa12.53□□□□□ -0.4
USP6NL-201ENST00000277575 FAM207AQ9NSI2 230 aaPredicted RBP12.53□□□□□ -0.4
USP6NL-201ENST00000277575 KCNG1Q9UIX4 513 aa12.53□□□□□ -0.4
USP6NL-201ENST00000277575 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.53□□□□□ -0.4
USP6NL-201ENST00000277575 SLC8A3P57103 927 aa12.53□□□□□ -0.4
USP6NL-201ENST00000277575 ARHGEF16Q5VV41 709 aa12.53□□□□□ -0.4
USP6NL-201ENST00000277575 KRBA2Q6ZNG9 492 aa12.53□□□□□ -0.4
USP6NL-201ENST00000277575 OTUD6AQ7L8S5 288 aa12.53□□□□□ -0.4
USP6NL-201ENST00000277575 CDAN1Q8IWY9 1227 aa12.53□□□□□ -0.4
USP6NL-201ENST00000277575 NAPGQ99747 312 aaPredicted RBP12.53□□□□□ -0.4
USP6NL-201ENST00000277575 MTRF1LQ9UGC7 380 aaKnown RBP12.53□□□□□ -0.4
USP6NL-201ENST00000277575 CD2BP2O95400 341 aaKnown RBP12.52□□□□□ -0.4
USP6NL-201ENST00000277575 FOSP01100 380 aaPredicted RBP12.52□□□□□ -0.4
USP6NL-201ENST00000277575 KLHL30Q0D2K2 578 aa12.52□□□□□ -0.4
USP6NL-201ENST00000277575 PPP1R7Q15435 360 aa12.52□□□□□ -0.4
USP6NL-201ENST00000277575 TAF12Q16514 161 aa12.52□□□□□ -0.4
USP6NL-201ENST00000277575 SEL1L2Q5TEA6 688 aa12.52□□□□□ -0.4
USP6NL-201ENST00000277575 MYOCDQ8IZQ8 938 aa12.52□□□□□ -0.4
USP6NL-201ENST00000277575 PSMD1Q99460 953 aa12.52□□□□□ -0.4
USP6NL-201ENST00000277575 NLRC4Q9NPP4 1024 aa12.52□□□□□ -0.4
USP6NL-201ENST00000277575 INCENPQ9NQS7 918 aa12.52□□□□□ -0.4
USP6NL-201ENST00000277575 SWAP70Q9UH65 585 aa12.52□□□□□ -0.4
USP6NL-201ENST00000277575 CLIC4Q9Y696 253 aa12.52□□□□□ -0.4
USP6NL-201ENST00000277575 RNF17Q9BXT8 1623 aaKnown RBP12.52□□□□□ -0.4
USP6NL-201ENST00000277575 TLDC2A0PJX2 215 aa12.52□□□□□ -0.4
USP6NL-201ENST00000277575 EVCP57679 992 aa12.52□□□□□ -0.4
USP6NL-201ENST00000277575 CCDC25Q86WR0 208 aa12.52□□□□□ -0.4
USP6NL-201ENST00000277575 JAKMIP2Q96AA8 810 aa12.52□□□□□ -0.4
USP6NL-201ENST00000277575 IWS1Q96ST2 819 aa12.52□□□□□ -0.4
USP6NL-201ENST00000277575 PIH1D3Q9NQM4 214 aaKnown RBP12.52□□□□□ -0.4
USP6NL-201ENST00000277575 ANKRD35Q8N283 1001 aa12.52□□□□□ -0.41
USP6NL-201ENST00000277575 KANSL2Q9H9L4 492 aa12.52□□□□□ -0.41
USP6NL-201ENST00000277575 ZSWIM5Q9P217 1185 aa12.52□□□□□ -0.41
USP6NL-201ENST00000277575 DDX25Q9UHL0 483 aaKnown RBP12.52□□□□□ -0.41
USP6NL-201ENST00000277575 ALKQ9UM73 1620 aa12.52□□□□□ -0.41
USP6NL-201ENST00000277575 RAD17O75943 681 aa12.52□□□□□ -0.41
USP6NL-201ENST00000277575 CUL4AQ13619 759 aa12.52□□□□□ -0.41
USP6NL-201ENST00000277575 ASPRV1Q53RT3 343 aa12.52□□□□□ -0.41
USP6NL-201ENST00000277575 PLA2G4DQ86XP0 818 aa12.52□□□□□ -0.41
USP6NL-201ENST00000277575 MCF2L2Q86YR7 1114 aa12.52□□□□□ -0.41
USP6NL-201ENST00000277575 SLFN12Q8IYM2 578 aa12.52□□□□□ -0.41
USP6NL-201ENST00000277575 RTEL1Q9NZ71 1219 aa12.52□□□□□ -0.41
USP6NL-201ENST00000277575 PNMA2Q9UL42 364 aa12.52□□□□□ -0.41
USP6NL-201ENST00000277575 SNAP23O00161 211 aa12.51□□□□□ -0.41
USP6NL-201ENST00000277575 TTLL1O95922 423 aa12.51□□□□□ -0.41
USP6NL-201ENST00000277575 PPM1FP49593 454 aaPredicted RBP12.51□□□□□ -0.41
USP6NL-201ENST00000277575 NDUFA8P51970 172 aa12.51□□□□□ -0.41
USP6NL-201ENST00000277575 TERF1P54274 439 aa12.51□□□□□ -0.41
USP6NL-201ENST00000277575 PPP2R3AQ06190 1150 aa12.51□□□□□ -0.41
USP6NL-201ENST00000277575 SLC39A14Q15043 492 aa12.51□□□□□ -0.41
USP6NL-201ENST00000277575 DCPSQ96C86 337 aaKnown RBP12.51□□□□□ -0.41
USP6NL-201ENST00000277575 NOX5Q96PH1 765 aa12.51□□□□□ -0.41
USP6NL-201ENST00000277575 MLXIPQ9HAP2 919 aa12.51□□□□□ -0.41
USP6NL-201ENST00000277575 LARSQ9P2J5 1176 aaKnown RBP12.51□□□□□ -0.41
USP6NL-201ENST00000277575 USP17L8P0C7I0 530 aa12.51□□□□□ -0.41
USP6NL-201ENST00000277575 CD19P15391 556 aa12.51□□□□□ -0.41
USP6NL-201ENST00000277575 PAIP2Q9BPZ3 127 aaKnown RBP12.51□□□□□ -0.41
USP6NL-201ENST00000277575 SLF1Q9BQI6 1058 aa12.51□□□□□ -0.41
USP6NL-201ENST00000277575 FOXP1Q9H334 677 aaPredicted RBP12.51□□□□□ -0.41
USP6NL-201ENST00000277575 CALCOCO1Q9P1Z2 691 aa12.51□□□□□ -0.41
USP6NL-201ENST00000277575 CCPG1Q9ULG6 757 aa12.51□□□□□ -0.41
USP6NL-201ENST00000277575 BCRP11274 1271 aa12.51□□□□□ -0.41
USP6NL-201ENST00000277575 TRIML1Q8N9V2 468 aa12.51□□□□□ -0.41
USP6NL-201ENST00000277575 ATRIPQ8WXE1 791 aa12.51□□□□□ -0.41
USP6NL-201ENST00000277575 NAP1L3Q99457 506 aaPredicted RBP12.51□□□□□ -0.41
USP6NL-201ENST00000277575 NARFQ9UHQ1 456 aa12.51□□□□□ -0.41
USP6NL-201ENST00000277575 CYP2D7A0A087X1C5 515 aa12.5□□□□□ -0.41
USP6NL-201ENST00000277575 A0A1W2PQ27 194 aa12.5□□□□□ -0.41
USP6NL-201ENST00000277575 A0A1W2PQ64 194 aa12.5□□□□□ -0.41
USP6NL-201ENST00000277575 A0A1W2PQD8 194 aa12.5□□□□□ -0.41
USP6NL-201ENST00000277575 GTPBP6O43824 516 aaPredicted RBP12.5□□□□□ -0.41
USP6NL-201ENST00000277575 STAMBPO95630 424 aa12.5□□□□□ -0.41
USP6NL-201ENST00000277575 IFNAR1P17181 557 aa12.5□□□□□ -0.41
USP6NL-201ENST00000277575 RNASE9P60153 205 aaKnown RBP12.5□□□□□ -0.41
USP6NL-201ENST00000277575 NECTIN1Q15223 517 aa12.5□□□□□ -0.41
USP6NL-201ENST00000277575 RRAGAQ7L523 313 aa12.5□□□□□ -0.41
USP6NL-201ENST00000277575 SYNE4Q8N205 404 aa12.5□□□□□ -0.41
USP6NL-201ENST00000277575 C17orf53Q8N3J3 647 aaPredicted RBP12.5□□□□□ -0.41
USP6NL-201ENST00000277575 CCDC114Q96M63 670 aa12.5□□□□□ -0.41
USP6NL-201ENST00000277575 CTTNBP2NLQ9P2B4 639 aa12.5□□□□□ -0.41
USP6NL-201ENST00000277575 CARMIL3Q8ND23 1372 aa12.5□□□□□ -0.41
USP6NL-201ENST00000277575 LONP1P36776 959 aaKnown RBP12.5□□□□□ -0.41
USP6NL-201ENST00000277575 MCAMP43121 646 aa12.5□□□□□ -0.41
USP6NL-201ENST00000277575 CYP4A11Q02928 519 aa12.5□□□□□ -0.41
USP6NL-201ENST00000277575 MECOMQ03112 1051 aa12.5□□□□□ -0.41
USP6NL-201ENST00000277575 LIN9Q5TKA1 542 aa12.5□□□□□ -0.41
USP6NL-201ENST00000277575 CCDC26Q8TAB7 109 aa12.5□□□□□ -0.41
USP6NL-201ENST00000277575 DEPTORQ8TB45 409 aa12.5□□□□□ -0.41
USP6NL-201ENST00000277575 SECISBP2LQ93073 1101 aaKnown RBP12.5□□□□□ -0.41
USP6NL-201ENST00000277575 ZBTB9Q96C00 473 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms