RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 KDRP35968 1356 aa13.12□□□□□ -0.31
SHPRH-201ENST00000275233 TUBB4AP04350 444 aa13.12□□□□□ -0.31
SHPRH-201ENST00000275233 CLCN1P35523 988 aa13.12□□□□□ -0.31
SHPRH-201ENST00000275233 GNPTABQ3T906 1256 aa13.12□□□□□ -0.31
SHPRH-201ENST00000275233 RTEL1Q9NZ71 1219 aa13.12□□□□□ -0.31
SHPRH-201ENST00000275233 DDX25Q9UHL0 483 aaKnown RBP13.12□□□□□ -0.31
SHPRH-201ENST00000275233 CAPN9O14815 690 aa13.12□□□□□ -0.31
SHPRH-201ENST00000275233 KIF22Q14807 665 aa13.12□□□□□ -0.31
SHPRH-201ENST00000275233 SDCCAG8Q86SQ7 713 aaPredicted RBP13.12□□□□□ -0.31
SHPRH-201ENST00000275233 IFT20Q8IY31 132 aa13.12□□□□□ -0.31
SHPRH-201ENST00000275233 ARFGAP2Q8N6H7 521 aa13.12□□□□□ -0.31
SHPRH-201ENST00000275233 ARHGEF10O15013 1369 aa13.12□□□□□ -0.31
SHPRH-201ENST00000275233 LONRF2Q1L5Z9 754 aa13.12□□□□□ -0.31
SHPRH-201ENST00000275233 HHATQ5VTY9 493 aa13.12□□□□□ -0.31
SHPRH-201ENST00000275233 C10orf67Q8IYJ2 551 aa13.12□□□□□ -0.31
SHPRH-201ENST00000275233 FAM193BQ96PV7 902 aaPredicted RBP13.12□□□□□ -0.31
SHPRH-201ENST00000275233 PHKG2P15735 406 aa13.12□□□□□ -0.31
SHPRH-201ENST00000275233 HACE1Q8IYU2 909 aa13.12□□□□□ -0.31
SHPRH-201ENST00000275233 PCDHA12Q9UN75 941 aa13.12□□□□□ -0.31
SHPRH-201ENST00000275233 TACC3Q9Y6A5 838 aa13.12□□□□□ -0.31
SHPRH-201ENST00000275233 KIAA0556O60303 1618 aa13.12□□□□□ -0.31
SHPRH-201ENST00000275233 ERVV-2B6SEH9 535 aa13.12□□□□□ -0.31
SHPRH-201ENST00000275233 BUB1O43683 1085 aa13.12□□□□□ -0.31
SHPRH-201ENST00000275233 P4HA1P13674 534 aa13.12□□□□□ -0.31
SHPRH-201ENST00000275233 KRT15P19012 456 aa13.12□□□□□ -0.31
SHPRH-201ENST00000275233 SULF1Q8IWU6 871 aa13.12□□□□□ -0.31
SHPRH-201ENST00000275233 BLIDQ8IZY5 108 aa13.12□□□□□ -0.31
SHPRH-201ENST00000275233 GREM2Q9H772 168 aa13.12□□□□□ -0.31
SHPRH-201ENST00000275233 VPS41P49754 854 aa13.11□□□□□ -0.31
SHPRH-201ENST00000275233 SATB1Q01826 763 aa13.11□□□□□ -0.31
SHPRH-201ENST00000275233 RPS6KA1Q15418 735 aa13.11□□□□□ -0.31
SHPRH-201ENST00000275233 FBXO11Q86XK2 927 aa13.11□□□□□ -0.31
SHPRH-201ENST00000275233 RSAD2Q8WXG1 361 aa13.11□□□□□ -0.31
SHPRH-201ENST00000275233 FAM184BQ9ULE4 1060 aa13.11□□□□□ -0.31
SHPRH-201ENST00000275233 CD2APQ9Y5K6 639 aa13.11□□□□□ -0.31
SHPRH-201ENST00000275233 TMEM232C9JQI7 657 aa13.11□□□□□ -0.31
SHPRH-201ENST00000275233 KRBA2Q6ZNG9 492 aa13.11□□□□□ -0.31
SHPRH-201ENST00000275233 ARHGEF2Q92974 986 aaKnown RBP13.11□□□□□ -0.31
SHPRH-201ENST00000275233 CYP4A11Q02928 519 aa13.11□□□□□ -0.31
SHPRH-201ENST00000275233 PNMA1Q8ND90 353 aa13.11□□□□□ -0.31
SHPRH-201ENST00000275233 EEF2KMTQ96G04 330 aa13.11□□□□□ -0.31
SHPRH-201ENST00000275233 CCPG1Q9ULG6 757 aa13.11□□□□□ -0.31
SHPRH-201ENST00000275233 KDM2BQ8NHM5 1336 aa13.11□□□□□ -0.31
SHPRH-201ENST00000275233 PALM3A6NDB9 673 aaPredicted RBP13.11□□□□□ -0.31
SHPRH-201ENST00000275233 LRRIQ4A6NIV6 560 aa13.11□□□□□ -0.31
SHPRH-201ENST00000275233 OATP04181 439 aa13.11□□□□□ -0.31
SHPRH-201ENST00000275233 HOXB7P09629 217 aa13.11□□□□□ -0.31
SHPRH-201ENST00000275233 ATP2B4P23634 1241 aa13.11□□□□□ -0.31
SHPRH-201ENST00000275233 ADORA1P30542 326 aa13.11□□□□□ -0.31
SHPRH-201ENST00000275233 ADD1P35611 737 aaKnown RBP13.11□□□□□ -0.31
SHPRH-201ENST00000275233 ICA1Q05084 483 aa13.11□□□□□ -0.31
SHPRH-201ENST00000275233 NOP9Q86U38 636 aaKnown RBP13.11□□□□□ -0.31
SHPRH-201ENST00000275233 QTRT2Q9H974 415 aaKnown RBP13.11□□□□□ -0.31
SHPRH-201ENST00000275233 KLRF2D3W0D1 207 aa13.11□□□□□ -0.31
SHPRH-201ENST00000275233 ATP5JP18859 108 aa13.11□□□□□ -0.31
SHPRH-201ENST00000275233 LACTBP83111 547 aaPredicted RBP13.11□□□□□ -0.31
SHPRH-201ENST00000275233 TNFAIP1Q13829 316 aa13.11□□□□□ -0.31
SHPRH-201ENST00000275233 ELF2Q15723 593 aa13.11□□□□□ -0.31
SHPRH-201ENST00000275233 CLIC6Q96NY7 704 aa13.11□□□□□ -0.31
SHPRH-201ENST00000275233 DSCC1Q9BVC3 393 aa13.11□□□□□ -0.31
SHPRH-201ENST00000275233 SLC5A4Q9NY91 659 aa13.11□□□□□ -0.31
SHPRH-201ENST00000275233 SAT1P21673 171 aa13.1□□□□□ -0.31
SHPRH-201ENST00000275233 KAZNQ674X7 775 aa13.1□□□□□ -0.31
SHPRH-201ENST00000275233 ZBTB38Q8NAP3 1195 aaPredicted RBP13.1□□□□□ -0.31
SHPRH-201ENST00000275233 CCDC127Q96BQ5 260 aa13.1□□□□□ -0.31
SHPRH-201ENST00000275233 ATP8A2Q9NTI2 1148 aa13.1□□□□□ -0.31
SHPRH-201ENST00000275233 AOX1Q06278 1338 aa13.1□□□□□ -0.31
SHPRH-201ENST00000275233 IFNB1P01574 187 aa13.1□□□□□ -0.31
SHPRH-201ENST00000275233 POLGP54098 1239 aaPredicted RBP13.1□□□□□ -0.31
SHPRH-201ENST00000275233 SLC39A2Q9NP94 309 aa13.1□□□□□ -0.31
SHPRH-201ENST00000275233 BABAM1Q9NWV8 329 aa13.1□□□□□ -0.31
SHPRH-201ENST00000275233 PPEF1O14829 653 aaPredicted RBP13.1□□□□□ -0.31
SHPRH-201ENST00000275233 GUCY2FP51841 1108 aa13.1□□□□□ -0.31
SHPRH-201ENST00000275233 NEDD9Q14511 834 aa13.1□□□□□ -0.31
SHPRH-201ENST00000275233 ZNF827Q17R98 1081 aa13.1□□□□□ -0.31
SHPRH-201ENST00000275233 KCTD1Q719H9 257 aa13.1□□□□□ -0.31
SHPRH-201ENST00000275233 CTAGE3PQ8IX95 158 aa13.1□□□□□ -0.31
SHPRH-201ENST00000275233 ANKRD42Q8N9B4 389 aa13.1□□□□□ -0.31
SHPRH-201ENST00000275233 HINFPQ9BQA5 517 aa13.1□□□□□ -0.31
SHPRH-201ENST00000275233 IFIH1Q9BYX4 1025 aaKnown RBP13.1□□□□□ -0.31
SHPRH-201ENST00000275233 MAST1Q9Y2H9 1570 aa13.1□□□□□ -0.31
SHPRH-201ENST00000275233 RIOK3O14730 519 aaKnown RBP13.1□□□□□ -0.31
SHPRH-201ENST00000275233 ZBTB8OSQ8IWT0 167 aa13.1□□□□□ -0.31
SHPRH-201ENST00000275233 KDM3AQ9Y4C1 1321 aa13.1□□□□□ -0.31
SHPRH-201ENST00000275233 SLC12A2P55011 1212 aa13.1□□□□□ -0.31
SHPRH-201ENST00000275233 PLA2G4DQ86XP0 818 aa13.1□□□□□ -0.31
SHPRH-201ENST00000275233 PPP1R16BQ96T49 567 aa13.1□□□□□ -0.31
SHPRH-201ENST00000275233 DBNDD1Q9H9R9 158 aa13.1□□□□□ -0.31
SHPRH-201ENST00000275233 GIGYF1O75420 1035 aaPredicted RBP13.09□□□□□ -0.31
SHPRH-201ENST00000275233 STAM2O75886 525 aa13.09□□□□□ -0.31
SHPRH-201ENST00000275233 XRCC5P13010 732 aaKnown RBP13.09□□□□□ -0.31
SHPRH-201ENST00000275233 PDE6AP16499 860 aa13.09□□□□□ -0.31
SHPRH-201ENST00000275233 ATF7P17544 494 aaPredicted RBP13.09□□□□□ -0.31
SHPRH-201ENST00000275233 TTC31Q49AM3 519 aaPredicted RBP13.09□□□□□ -0.31
SHPRH-201ENST00000275233 NT5C3AQ9H0P0 336 aa13.09□□□□□ -0.31
SHPRH-201ENST00000275233 MRPL11Q9Y3B7 192 aaKnown RBP13.09□□□□□ -0.31
SHPRH-201ENST00000275233 TNKSO95271 1327 aa13.09□□□□□ -0.31
SHPRH-201ENST00000275233 GOLGA6CA6NDK9 693 aa13.09□□□□□ -0.31
SHPRH-201ENST00000275233 KCNJ18B7U540 433 aa13.09□□□□□ -0.31
SHPRH-201ENST00000275233 TNNC2P02585 160 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms