RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 STX1BP61266 288 aa9.55□□□□□ -0.88
SCUBE3-201ENST00000274938 DEUP1Q05D60 604 aa9.55□□□□□ -0.88
SCUBE3-201ENST00000274938 BRDTQ58F21 947 aaPredicted RBP9.55□□□□□ -0.88
SCUBE3-201ENST00000274938 MYOCDQ8IZQ8 938 aa9.55□□□□□ -0.88
SCUBE3-201ENST00000274938 ANKRD35Q8N283 1001 aa9.55□□□□□ -0.88
SCUBE3-201ENST00000274938 CCDC68Q9H2F9 335 aa9.55□□□□□ -0.88
SCUBE3-201ENST00000274938 PCDHB13Q9Y5F0 798 aa9.55□□□□□ -0.88
SCUBE3-201ENST00000274938 ORC6Q9Y5N6 252 aa9.55□□□□□ -0.88
SCUBE3-201ENST00000274938 BZW2Q9Y6E2 419 aaKnown RBP9.55□□□□□ -0.88
SCUBE3-201ENST00000274938 MSH6P52701 1360 aa9.55□□□□□ -0.88
SCUBE3-201ENST00000274938 MAP3K7O43318 606 aa9.55□□□□□ -0.88
SCUBE3-201ENST00000274938 ZKSCAN8Q15776 578 aaPredicted RBP9.55□□□□□ -0.88
SCUBE3-201ENST00000274938 ARHGEF18Q6ZSZ5 1173 aa9.55□□□□□ -0.88
SCUBE3-201ENST00000274938 TMTC3Q6ZXV5 915 aa9.55□□□□□ -0.88
SCUBE3-201ENST00000274938 TEX11Q8IYF3 940 aa9.55□□□□□ -0.88
SCUBE3-201ENST00000274938 HELBQ8NG08 1087 aaPredicted RBP9.55□□□□□ -0.88
SCUBE3-201ENST00000274938 SIRT1Q96EB6 747 aa9.55□□□□□ -0.88
SCUBE3-201ENST00000274938 DSCC1Q9BVC3 393 aa9.55□□□□□ -0.88
SCUBE3-201ENST00000274938 H0YCG3 227 aa9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 TRMT44Q8IYL2 757 aaKnown RBP9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 RIOK1Q9BRS2 568 aaKnown RBP9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 DPH5Q9H2P9 285 aa9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 MAGEF1Q9HAY2 307 aa9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 FLT4P35916 1363 aa9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 KIF24Q5T7B8 1368 aa9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 PFKFB1P16118 471 aa9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 CMA1P23946 247 aa9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 KRT81Q14533 505 aa9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 DZIP3Q86Y13 1208 aaKnown RBP9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 TRIM56Q9BRZ2 755 aaKnown RBP9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 BICC1Q9H694 974 aaKnown RBP9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 NLRC4Q9NPP4 1024 aa9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 STAM2O75886 525 aa9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 IFT88Q13099 833 aa9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 SPATA1Q5VX52 437 aa9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 DYMQ7RTS9 669 aa9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 NELFCDQ8IXH7 590 aa9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 ZC3H15Q8WU90 426 aaKnown RBP9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 POLKQ9UBT6 870 aa9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 PPP2R5CQ13362 524 aa9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 PNOCQ13519 176 aa9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 TAF11Q15544 211 aa9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 RSBN1LQ6PCB5 846 aaPredicted RBP9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 CENPKQ9BS16 269 aa9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 GPCPD1Q9NPB8 672 aa9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 ZNF277Q9NRM2 450 aaPredicted RBP9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 GTPBP6O43824 516 aaPredicted RBP9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 PRPF6O94906 941 aaKnown RBP9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 PUM3Q15397 648 aaKnown RBP9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 NRBF2Q96F24 287 aa9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 IFNB1P01574 187 aa9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 PPP1R2P3Q6NXS1 205 aa9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 TRIM50Q86XT4 487 aa9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 KBTBD3Q8NAB2 608 aa9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 NCOA5Q9HCD5 579 aaKnown RBP9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 IPO11Q9UI26 975 aaKnown RBP9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 JRKLQ9Y4A0 524 aa9.54□□□□□ -0.88
SCUBE3-201ENST00000274938 PLCH2O75038 1416 aa9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 LMNAP02545 664 aaKnown RBP9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 GSTA1P08263 222 aa9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 GSTA2P09210 222 aa9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 ARHGAP44Q17R89 818 aa9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 MORC4Q8TE76 937 aa9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 KLHL29Q96CT2 875 aa9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 ZNF274Q96GC6 653 aaPredicted RBP9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 SCYL1Q96KG9 808 aa9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 HSPA6P17066 643 aa9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 BFSP1Q12934 665 aa9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 EIF4A2Q14240 407 aaKnown RBP9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 ST13P4Q8IZP2 240 aaPredicted RBP9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 PSPC1Q8WXF1 523 aaKnown RBP9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 FGFR1OP2Q9NVK5 253 aa9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 SEPT10Q9P0V9 454 aa9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 TTI1O43156 1089 aa9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 PLCB4Q15147 1175 aa9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 MTHFSDQ2M296 383 aaKnown RBP9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 FAM173BQ6P4H8 233 aa9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 PDCD7Q8N8D1 485 aaKnown RBP9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 PROCA1Q8NCQ7 364 aaPredicted RBP9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 EPN1Q9Y6I3 576 aaPredicted RBP9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 POLR2BP30876 1174 aaKnown RBP9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 PDE6CP51160 858 aa9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 CWF19L2Q2TBE0 894 aaKnown RBP9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 TDRD7Q8NHU6 1098 aaKnown RBP9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 GPAA1O43292 621 aa9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 SP4Q02446 784 aa9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 LMNB1P20700 586 aa9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 KPNA2P52292 529 aaKnown RBP9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 GUCY2DQ02846 1103 aa9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 SF3A3Q12874 501 aaKnown RBP eCLIP9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 TRIM11Q96F44 468 aa9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 DESI2Q9BSY9 194 aa9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 PKD2L1Q9P0L9 805 aa9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 ARMCX3Q9UH62 379 aaPredicted RBP9.53□□□□□ -0.88
SCUBE3-201ENST00000274938 ALS2CLQ60I27 953 aa9.52□□□□□ -0.88
SCUBE3-201ENST00000274938 SCYL3Q8IZE3 742 aa9.52□□□□□ -0.88
SCUBE3-201ENST00000274938 CCDC138Q96M89 665 aa9.52□□□□□ -0.88
SCUBE3-201ENST00000274938 MRPL46Q9H2W6 279 aaKnown RBP9.52□□□□□ -0.88
SCUBE3-201ENST00000274938 AZI2Q9H6S1 392 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms