RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 PPP2R5BQ15173 497 aa20.07■□□□□ 0.8
SKP2-201ENST00000274254 ASPRV1Q53RT3 343 aa20.07■□□□□ 0.8
SKP2-201ENST00000274254 PROCA1Q8NCQ7 364 aaPredicted RBP20.07■□□□□ 0.8
SKP2-201ENST00000274254 TMX3Q96JJ7 454 aa20.07■□□□□ 0.8
SKP2-201ENST00000274254 MAD2L2Q9UI95 211 aa20.07■□□□□ 0.8
SKP2-201ENST00000274254 RBM19Q9Y4C8 960 aaKnown RBP20.07■□□□□ 0.8
SKP2-201ENST00000274254 GOLGA8AA7E2F4 631 aa20.07■□□□□ 0.8
SKP2-201ENST00000274254 PARP1P09874 1014 aaKnown RBP20.07■□□□□ 0.8
SKP2-201ENST00000274254 CDC27P30260 824 aa20.07■□□□□ 0.8
SKP2-201ENST00000274254 KIF5BP33176 963 aa20.07■□□□□ 0.8
SKP2-201ENST00000274254 SCRN1Q12765 414 aa20.07■□□□□ 0.8
SKP2-201ENST00000274254 MKRN3Q13064 507 aaKnown RBP20.07■□□□□ 0.8
SKP2-201ENST00000274254 RTN1Q16799 776 aa20.07■□□□□ 0.8
SKP2-201ENST00000274254 GPATCH4Q5T3I0 446 aaKnown RBP20.07■□□□□ 0.8
SKP2-201ENST00000274254 CCDC144CPQ8IYA2 1237 aa20.07■□□□□ 0.8
SKP2-201ENST00000274254 CTCFLQ8NI51 663 aaPredicted RBP20.07■□□□□ 0.8
SKP2-201ENST00000274254 NUP88Q99567 741 aaPredicted RBP20.07■□□□□ 0.8
SKP2-201ENST00000274254 SLKQ9H2G2 1235 aaPredicted RBP20.07■□□□□ 0.8
SKP2-201ENST00000274254 K7ELQ4 463 aaPredicted RBP20.06■□□□□ 0.8
SKP2-201ENST00000274254 BMP3P12645 472 aa20.06■□□□□ 0.8
SKP2-201ENST00000274254 CCT2P78371 535 aaKnown RBP20.06■□□□□ 0.8
SKP2-201ENST00000274254 ST3GAL1Q11201 340 aa20.06■□□□□ 0.8
SKP2-201ENST00000274254 STK3Q13188 491 aa20.06■□□□□ 0.8
SKP2-201ENST00000274254 FAM83BQ5T0W9 1011 aa20.06■□□□□ 0.8
SKP2-201ENST00000274254 FASTKD5Q7L8L6 764 aaKnown RBP20.06■□□□□ 0.8
SKP2-201ENST00000274254 STAG2Q8N3U4 1231 aa20.06■□□□□ 0.8
SKP2-201ENST00000274254 GTF3C6Q969F1 213 aa20.06■□□□□ 0.8
SKP2-201ENST00000274254 CHMP4CQ96CF2 233 aa20.06■□□□□ 0.8
SKP2-201ENST00000274254 RBM28Q9NW13 759 aaKnown RBP20.06■□□□□ 0.8
SKP2-201ENST00000274254 CETPP11597 493 aa20.05■□□□□ 0.8
SKP2-201ENST00000274254 CCDC96Q2M329 555 aa20.05■□□□□ 0.8
SKP2-201ENST00000274254 DEFB115Q30KQ5 88 aa20.05■□□□□ 0.8
SKP2-201ENST00000274254 KCTD1Q719H9 257 aa20.05■□□□□ 0.8
SKP2-201ENST00000274254 HSCBQ8IWL3 235 aa20.05■□□□□ 0.8
SKP2-201ENST00000274254 NECAB1Q8N987 351 aa20.05■□□□□ 0.8
SKP2-201ENST00000274254 NCOA5Q9HCD5 579 aaKnown RBP20.05■□□□□ 0.8
SKP2-201ENST00000274254 FRMPD2Q68DX3 1309 aaPredicted RBP20.05■□□□□ 0.8
SKP2-201ENST00000274254 CCDC196A0A1B0GTZ2 297 aa20.04■□□□□ 0.8
SKP2-201ENST00000274254 TESPA1A2RU30 521 aaPredicted RBP20.04■□□□□ 0.8
SKP2-201ENST00000274254 GOLGA8HP0CJ92 632 aa20.04■□□□□ 0.8
SKP2-201ENST00000274254 ADD1P35611 737 aaKnown RBP20.04■□□□□ 0.8
SKP2-201ENST00000274254 C1QTNF8P60827 252 aa20.04■□□□□ 0.8
SKP2-201ENST00000274254 CYP4F22Q6NT55 531 aa20.04■□□□□ 0.8
SKP2-201ENST00000274254 BRI3BPQ8WY22 251 aa20.04■□□□□ 0.8
SKP2-201ENST00000274254 RPAP3Q9H6T3 665 aaPredicted RBP20.04■□□□□ 0.8
SKP2-201ENST00000274254 KLRF2D3W0D1 207 aa20.03■□□□□ 0.8
SKP2-201ENST00000274254 PLA2G6O60733 806 aa20.03■□□□□ 0.8
SKP2-201ENST00000274254 GNAQP50148 359 aa20.03■□□□□ 0.8
SKP2-201ENST00000274254 TREML2Q5T2D2 321 aa20.03■□□□□ 0.8
SKP2-201ENST00000274254 TTBK2Q6IQ55 1244 aa20.03■□□□□ 0.8
SKP2-201ENST00000274254 GPAT2Q6NUI2 795 aa20.03■□□□□ 0.8
SKP2-201ENST00000274254 BTNL9Q6UXG8 535 aa20.03■□□□□ 0.8
SKP2-201ENST00000274254 GADL1Q6ZQY3 521 aa20.03■□□□□ 0.8
SKP2-201ENST00000274254 TMTC3Q6ZXV5 915 aa20.03■□□□□ 0.8
SKP2-201ENST00000274254 GPCPD1Q9NPB8 672 aa20.03■□□□□ 0.8
SKP2-201ENST00000274254 AGTPBP1Q9UPW5 1226 aa20.03■□□□□ 0.8
SKP2-201ENST00000274254 CCL15-CCL14A0A0B4J2E2 113 aa20.02■□□□□ 0.8
SKP2-201ENST00000274254 MANSC4A6NHS7 340 aaPredicted RBP20.02■□□□□ 0.8
SKP2-201ENST00000274254 PLEKHA8P1O95397 391 aa20.02■□□□□ 0.8
SKP2-201ENST00000274254 HOXA7P31268 230 aaPredicted RBP20.02■□□□□ 0.8
SKP2-201ENST00000274254 NTRK3Q16288 839 aa20.02■□□□□ 0.8
SKP2-201ENST00000274254 CCL15Q16663 113 aa20.02■□□□□ 0.8
SKP2-201ENST00000274254 LZTS2Q9BRK4 669 aa20.02■□□□□ 0.8
SKP2-201ENST00000274254 BAZ2BQ9UIF8 2168 aaKnown RBP20.02■□□□□ 0.79
SKP2-201ENST00000274254 USP17L15C9J2P7 530 aa20.02■□□□□ 0.79
SKP2-201ENST00000274254 USP17L13C9JLJ4 530 aa20.02■□□□□ 0.79
SKP2-201ENST00000274254 TMEM232C9JQI7 657 aa20.02■□□□□ 0.79
SKP2-201ENST00000274254 USP17L11C9JVI0 530 aa20.02■□□□□ 0.79
SKP2-201ENST00000274254 USP17L18D6R9N7 530 aa20.02■□□□□ 0.79
SKP2-201ENST00000274254 USP17L22D6RA61 530 aa20.02■□□□□ 0.79
SKP2-201ENST00000274254 USP17L17D6RBQ6 530 aa20.02■□□□□ 0.79
SKP2-201ENST00000274254 USP17L19D6RCP7 530 aa20.02■□□□□ 0.79
SKP2-201ENST00000274254 USP17L20D6RJB6 530 aa20.02■□□□□ 0.79
SKP2-201ENST00000274254 DHX16O60231 1041 aaKnown RBP20.02■□□□□ 0.79
SKP2-201ENST00000274254 SMARCA1P28370 1054 aa20.02■□□□□ 0.79
SKP2-201ENST00000274254 STAT2P52630 851 aa20.02■□□□□ 0.79
SKP2-201ENST00000274254 USP17L24Q0WX57 530 aa20.02■□□□□ 0.79
SKP2-201ENST00000274254 FUT2Q10981 343 aa20.02■□□□□ 0.79
SKP2-201ENST00000274254 CUL4AQ13619 759 aa20.02■□□□□ 0.79
SKP2-201ENST00000274254 SLC35G1Q2M3R5 365 aa20.02■□□□□ 0.79
SKP2-201ENST00000274254 CATSPERGQ6ZRH7 1159 aa20.02■□□□□ 0.79
SKP2-201ENST00000274254 PAXIP1Q6ZW49 1069 aaPredicted RBP20.02■□□□□ 0.79
SKP2-201ENST00000274254 NBPF11Q86T75 865 aa20.02■□□□□ 0.79
SKP2-201ENST00000274254 SRBD1Q8N5C6 995 aaKnown RBP20.02■□□□□ 0.79
SKP2-201ENST00000274254 CAPNS2Q96L46 248 aa20.02■□□□□ 0.79
SKP2-201ENST00000274254 TANGO6Q9C0B7 1094 aa20.02■□□□□ 0.79
SKP2-201ENST00000274254 FEM1BQ9UK73 627 aa20.02■□□□□ 0.79
SKP2-201ENST00000274254 RLFQ13129 1914 aa20.01■□□□□ 0.79
SKP2-201ENST00000274254 PARP14Q460N5 1801 aa20.01■□□□□ 0.79
SKP2-201ENST00000274254 CYTH3O43739 400 aa20.01■□□□□ 0.79
SKP2-201ENST00000274254 ANP32AP39687 249 aaKnown RBP20.01■□□□□ 0.79
SKP2-201ENST00000274254 HTRA3P83110 453 aa20.01■□□□□ 0.79
SKP2-201ENST00000274254 NOGQ13253 232 aa20.01■□□□□ 0.79
SKP2-201ENST00000274254 FAM160B2Q86V87 743 aa20.01■□□□□ 0.79
SKP2-201ENST00000274254 CCDC83Q8IWF9 413 aa20.01■□□□□ 0.79
SKP2-201ENST00000274254 CMTR1Q8N1G2 835 aaKnown RBP20.01■□□□□ 0.79
SKP2-201ENST00000274254 CHURC1Q8WUH1 139 aa20.01■□□□□ 0.79
SKP2-201ENST00000274254 PTPN18Q99952 460 aa20.01■□□□□ 0.79
SKP2-201ENST00000274254 SPZ1Q9BXG8 430 aa20.01■□□□□ 0.79
SKP2-201ENST00000274254 UBA5Q9GZZ9 404 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms