RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 RBM26Q5T8P6 1007 aaKnown RBP18.85■□□□□ 0.61
TPM1-201ENST00000267996 TNFRSF25Q93038 417 aa18.85■□□□□ 0.61
TPM1-201ENST00000267996 LIG1P18858 919 aa18.85■□□□□ 0.61
TPM1-201ENST00000267996 TNNI2P48788 182 aa18.85■□□□□ 0.61
TPM1-201ENST00000267996 TOB1P50616 345 aaPredicted RBP18.85■□□□□ 0.61
TPM1-201ENST00000267996 SLC39A14Q15043 492 aa18.85■□□□□ 0.61
TPM1-201ENST00000267996 STK38Q15208 465 aa18.85■□□□□ 0.61
TPM1-201ENST00000267996 PTPAQ15257 358 aa18.85■□□□□ 0.61
TPM1-201ENST00000267996 SYNPO2Q9UMS6 1093 aa18.85■□□□□ 0.61
TPM1-201ENST00000267996 SPTLC2O15270 562 aa18.84■□□□□ 0.61
TPM1-201ENST00000267996 GDF11O95390 407 aa18.84■□□□□ 0.61
TPM1-201ENST00000267996 GH2P01242 217 aa18.84■□□□□ 0.61
TPM1-201ENST00000267996 ICA1Q05084 483 aa18.84■□□□□ 0.61
TPM1-201ENST00000267996 RILPL1Q5EBL4 403 aa18.84■□□□□ 0.61
TPM1-201ENST00000267996 GPATCH4Q5T3I0 446 aaKnown RBP18.84■□□□□ 0.61
TPM1-201ENST00000267996 CDAN1Q8IWY9 1227 aa18.84■□□□□ 0.61
TPM1-201ENST00000267996 BRMS1Q9HCU9 246 aa18.84■□□□□ 0.61
TPM1-201ENST00000267996 CABP5Q9NP86 173 aa18.84■□□□□ 0.61
TPM1-201ENST00000267996 BARHL2Q9NY43 387 aa18.84■□□□□ 0.61
TPM1-201ENST00000267996 STXBP3O00186 592 aa18.83■□□□□ 0.61
TPM1-201ENST00000267996 CALML3P27482 149 aa18.83■□□□□ 0.61
TPM1-201ENST00000267996 TNFAIP1Q13829 316 aa18.83■□□□□ 0.61
TPM1-201ENST00000267996 RASA3Q14644 834 aa18.83■□□□□ 0.61
TPM1-201ENST00000267996 SF3A1Q15459 793 aaKnown RBP18.83■□□□□ 0.61
TPM1-201ENST00000267996 WWC2Q6AWC2 1192 aa18.83■□□□□ 0.61
TPM1-201ENST00000267996 SAMD7Q7Z3H4 446 aa18.83■□□□□ 0.61
TPM1-201ENST00000267996 GAS2L3Q86XJ1 694 aa18.83■□□□□ 0.61
TPM1-201ENST00000267996 PIBF1Q8WXW3 757 aa18.83■□□□□ 0.61
TPM1-201ENST00000267996 RRP36Q96EU6 259 aaKnown RBP18.83■□□□□ 0.61
TPM1-201ENST00000267996 CPVLQ9H3G5 476 aa18.83■□□□□ 0.61
TPM1-201ENST00000267996 PCDHA7Q9UN72 937 aa18.83■□□□□ 0.61
TPM1-201ENST00000267996 FRMPD2Q68DX3 1309 aaPredicted RBP18.82■□□□□ 0.6
TPM1-201ENST00000267996 A0A1W2PQ27 194 aa18.82■□□□□ 0.6
TPM1-201ENST00000267996 A0A1W2PQ64 194 aa18.82■□□□□ 0.6
TPM1-201ENST00000267996 A0A1W2PQD8 194 aa18.82■□□□□ 0.6
TPM1-201ENST00000267996 NLRP5P59047 1200 aa18.82■□□□□ 0.6
TPM1-201ENST00000267996 ATP2B2Q01814 1243 aa18.82■□□□□ 0.6
TPM1-201ENST00000267996 KIF4BQ2VIQ3 1234 aa18.82■□□□□ 0.6
TPM1-201ENST00000267996 ADALQ6DHV7 355 aa18.82■□□□□ 0.6
TPM1-201ENST00000267996 GALNT17Q6IS24 598 aa18.82■□□□□ 0.6
TPM1-201ENST00000267996 TYW1BQ6NUM6 668 aa18.82■□□□□ 0.6
TPM1-201ENST00000267996 ILDR2Q71H61 639 aa18.82■□□□□ 0.6
TPM1-201ENST00000267996 GPC2Q8N158 579 aa18.82■□□□□ 0.6
TPM1-201ENST00000267996 DCAF4Q8WV16 495 aa18.82■□□□□ 0.6
TPM1-201ENST00000267996 TEPSINQ96N21 525 aa18.82■□□□□ 0.6
TPM1-201ENST00000267996 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.82■□□□□ 0.6
TPM1-201ENST00000267996 H7C1D1 291 aa18.82■□□□□ 0.6
TPM1-201ENST00000267996 PPP6R2O75170 966 aa18.82■□□□□ 0.6
TPM1-201ENST00000267996 ME1P48163 572 aa18.82■□□□□ 0.6
TPM1-201ENST00000267996 TBC1D10BQ4KMP7 808 aaPredicted RBP18.82■□□□□ 0.6
TPM1-201ENST00000267996 DAGLBQ8NCG7 672 aa18.82■□□□□ 0.6
TPM1-201ENST00000267996 GMCL1P1Q8NEA9 526 aa18.82■□□□□ 0.6
TPM1-201ENST00000267996 BICD2Q8TD16 824 aa18.82■□□□□ 0.6
TPM1-201ENST00000267996 GPKOWQ92917 476 aaPredicted RBP eCLIP18.82■□□□□ 0.6
TPM1-201ENST00000267996 UBA5Q9GZZ9 404 aa18.82■□□□□ 0.6
TPM1-201ENST00000267996 GPRC5DQ9NZD1 345 aa18.82■□□□□ 0.6
TPM1-201ENST00000267996 MORC2Q9Y6X9 1032 aaPredicted RBP18.82■□□□□ 0.6
TPM1-201ENST00000267996 GOLGA6L3A6NEY3 463 aa18.81■□□□□ 0.6
TPM1-201ENST00000267996 LETM1O95202 739 aaPredicted RBP18.81■□□□□ 0.6
TPM1-201ENST00000267996 TPRNQ4KMQ1 711 aa18.81■□□□□ 0.6
TPM1-201ENST00000267996 EARS2Q5JPH6 523 aaKnown RBP18.81■□□□□ 0.6
TPM1-201ENST00000267996 AXDND1Q5T1B0 1012 aaPredicted RBP18.81■□□□□ 0.6
TPM1-201ENST00000267996 CCDC148Q8NFR7 591 aa18.81■□□□□ 0.6
TPM1-201ENST00000267996 MTMR8Q96EF0 704 aa18.81■□□□□ 0.6
TPM1-201ENST00000267996 GPCPD1Q9NPB8 672 aa18.81■□□□□ 0.6
TPM1-201ENST00000267996 PCDHA4Q9UN74 947 aa18.81■□□□□ 0.6
TPM1-201ENST00000267996 SYCE3A1L190 88 aa18.8■□□□□ 0.6
TPM1-201ENST00000267996 hCG_1984214I3L0E3 225 aa18.8■□□□□ 0.6
TPM1-201ENST00000267996 M0R2N6 131 aa18.8■□□□□ 0.6
TPM1-201ENST00000267996 SLFN13Q68D06 897 aa18.8■□□□□ 0.6
TPM1-201ENST00000267996 LRSAM1Q6UWE0 723 aa18.8■□□□□ 0.6
TPM1-201ENST00000267996 HEATR3Q7Z4Q2 680 aa18.8■□□□□ 0.6
TPM1-201ENST00000267996 ZNF713Q8N859 430 aaPredicted RBP18.8■□□□□ 0.6
TPM1-201ENST00000267996 GMCL1Q96IK5 515 aa18.8■□□□□ 0.6
TPM1-201ENST00000267996 PIGSQ96S52 555 aa18.8■□□□□ 0.6
TPM1-201ENST00000267996 DDX19AQ9NUU7 478 aaKnown RBP18.8■□□□□ 0.6
TPM1-201ENST00000267996 HACL1Q9UJ83 578 aa18.8■□□□□ 0.6
TPM1-201ENST00000267996 ZBTB21Q9ULJ3 1066 aa18.8■□□□□ 0.6
TPM1-201ENST00000267996 ASTN2O75129 1339 aaPredicted RBP18.8■□□□□ 0.6
TPM1-201ENST00000267996 YBX3P16989 372 aaKnown RBP eCLIP18.79■□□□□ 0.6
TPM1-201ENST00000267996 TTBK2Q6IQ55 1244 aa18.79■□□□□ 0.6
TPM1-201ENST00000267996 CCAR1Q8IX12 1150 aaKnown RBP18.79■□□□□ 0.6
TPM1-201ENST00000267996 BLIDQ8IZY5 108 aa18.79■□□□□ 0.6
TPM1-201ENST00000267996 JMYQ8N9B5 988 aa18.79■□□□□ 0.6
TPM1-201ENST00000267996 ZMYND12Q9H0C1 365 aa18.79■□□□□ 0.6
TPM1-201ENST00000267996 JMJD4Q9H9V9 463 aa18.79■□□□□ 0.6
TPM1-201ENST00000267996 DACT1Q9NYF0 836 aa18.79■□□□□ 0.6
TPM1-201ENST00000267996 SEC63Q9UGP8 760 aaKnown RBP18.79■□□□□ 0.6
TPM1-201ENST00000267996 A0A1W2PRG0 241 aa18.79■□□□□ 0.6
TPM1-201ENST00000267996 FAM205CA6NFA0 338 aa18.79■□□□□ 0.6
TPM1-201ENST00000267996 F5H6K3 240 aa18.79■□□□□ 0.6
TPM1-201ENST00000267996 ADAMTS3O15072 1205 aa18.79■□□□□ 0.6
TPM1-201ENST00000267996 NR1I2O75469 434 aa18.79■□□□□ 0.6
TPM1-201ENST00000267996 CAP2P40123 477 aa18.79■□□□□ 0.6
TPM1-201ENST00000267996 KLRC3Q07444 240 aa18.79■□□□□ 0.6
TPM1-201ENST00000267996 CCDC96Q2M329 555 aa18.79■□□□□ 0.6
TPM1-201ENST00000267996 MIGA2Q7L4E1 593 aa18.79■□□□□ 0.6
TPM1-201ENST00000267996 ADGRF4Q8IZF3 695 aa18.79■□□□□ 0.6
TPM1-201ENST00000267996 ENGASEQ8NFI3 743 aa18.79■□□□□ 0.6
TPM1-201ENST00000267996 CCDC12Q8WUD4 166 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms