RNA–Protein interactions for RNA: ENST00000267935.12

COMMD4-201, Transcript of COMM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD4, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-201ENST00000267935 ANO1Q5XXA6 986 aa17.06■□□□□ 0.32
COMMD4-201ENST00000267935 RNF180Q86T96 592 aa17.06■□□□□ 0.32
COMMD4-201ENST00000267935 RIOX2Q8IUF8 465 aa17.06■□□□□ 0.32
COMMD4-201ENST00000267935 PRDM5Q9NQX1 630 aaPredicted RBP17.06■□□□□ 0.32
COMMD4-201ENST00000267935 ADAMTS5Q9UNA0 930 aa17.06■□□□□ 0.32
COMMD4-201ENST00000267935 ADCYAP1R1P41586 468 aa17.05■□□□□ 0.32
COMMD4-201ENST00000267935 TMEM132BQ14DG7 1078 aa17.05■□□□□ 0.32
COMMD4-201ENST00000267935 LRRC41Q15345 812 aa17.05■□□□□ 0.32
COMMD4-201ENST00000267935 DIEXFQ68CQ4 756 aaKnown RBP17.05■□□□□ 0.32
COMMD4-201ENST00000267935 SIRT2Q8IXJ6 389 aa17.05■□□□□ 0.32
COMMD4-201ENST00000267935 LRRCC1Q9C099 1032 aa17.05■□□□□ 0.32
COMMD4-201ENST00000267935 MKNK2Q9HBH9 465 aa17.05■□□□□ 0.32
COMMD4-201ENST00000267935 CTDP1Q9Y5B0 961 aaPredicted RBP17.05■□□□□ 0.32
COMMD4-201ENST00000267935 ZNF697Q5TEC3 545 aa17.04■□□□□ 0.32
COMMD4-201ENST00000267935 C1orf53Q5VUE5 145 aa17.04■□□□□ 0.32
COMMD4-201ENST00000267935 CTR9Q6PD62 1173 aa17.04■□□□□ 0.32
COMMD4-201ENST00000267935 TINF2Q9BSI4 451 aa17.04■□□□□ 0.32
COMMD4-201ENST00000267935 ZNF287Q9HBT7 754 aa17.04■□□□□ 0.32
COMMD4-201ENST00000267935 XPNPEP3Q9NQH7 507 aa17.04■□□□□ 0.32
COMMD4-201ENST00000267935 ARPP21Q9UBL0 812 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-201ENST00000267935 PPP1R9AQ9ULJ8 1098 aa17.04■□□□□ 0.32
COMMD4-201ENST00000267935 CNPY2Q9Y2B0 182 aa17.04■□□□□ 0.32
COMMD4-201ENST00000267935 TACC3Q9Y6A5 838 aa17.04■□□□□ 0.32
COMMD4-201ENST00000267935 NAV1Q8NEY1 1877 aa17.03■□□□□ 0.32
COMMD4-201ENST00000267935 CYP2D7A0A087X1C5 515 aa17.03■□□□□ 0.32
COMMD4-201ENST00000267935 VWA5AO00534 786 aa17.03■□□□□ 0.32
COMMD4-201ENST00000267935 LRRFIP1Q32MZ4 808 aaKnown RBP17.03■□□□□ 0.32
COMMD4-201ENST00000267935 GIMAP6Q6P9H5 292 aa17.03■□□□□ 0.32
COMMD4-201ENST00000267935 CLEC10AQ8IUN9 316 aa17.03■□□□□ 0.32
COMMD4-201ENST00000267935 FERMT2Q96AC1 680 aa17.03■□□□□ 0.32
COMMD4-201ENST00000267935 DDX11Q96FC9 970 aa17.03■□□□□ 0.32
COMMD4-201ENST00000267935 GPATCH3Q96I76 525 aa17.03■□□□□ 0.32
COMMD4-201ENST00000267935 SNX17Q15036 470 aa17.02■□□□□ 0.32
COMMD4-201ENST00000267935 TRIM60Q495X7 471 aa17.02■□□□□ 0.32
COMMD4-201ENST00000267935 SLFNL1Q499Z3 407 aa17.02■□□□□ 0.32
COMMD4-201ENST00000267935 MSL3Q8N5Y2 521 aaKnown RBP17.02■□□□□ 0.32
COMMD4-201ENST00000267935 ZBED4O75132 1171 aa17.01■□□□□ 0.31
COMMD4-201ENST00000267935 PGK2P07205 417 aa17.01■□□□□ 0.31
COMMD4-201ENST00000267935 AKR1A1P14550 325 aa17.01■□□□□ 0.31
COMMD4-201ENST00000267935 SHHQ15465 462 aa17.01■□□□□ 0.31
COMMD4-201ENST00000267935 ZNF792Q3KQV3 632 aa17.01■□□□□ 0.31
COMMD4-201ENST00000267935 SBK1Q52WX2 424 aa17.01■□□□□ 0.31
COMMD4-201ENST00000267935 FAM47AQ5JRC9 791 aa17.01■□□□□ 0.31
COMMD4-201ENST00000267935 FAM83BQ5T0W9 1011 aa17.01■□□□□ 0.31
COMMD4-201ENST00000267935 ZNF444Q8N0Y2 327 aaPredicted RBP17.01■□□□□ 0.31
COMMD4-201ENST00000267935 PRPF38AQ8NAV1 312 aaKnown RBP17.01■□□□□ 0.31
COMMD4-201ENST00000267935 BADQ92934 168 aa17.01■□□□□ 0.31
COMMD4-201ENST00000267935 SLF1Q9BQI6 1058 aa17.01■□□□□ 0.31
COMMD4-201ENST00000267935 TEX13BQ9BXU2 312 aa17.01■□□□□ 0.31
COMMD4-201ENST00000267935 PUS7LQ9H0K6 701 aaKnown RBP17.01■□□□□ 0.31
COMMD4-201ENST00000267935 ECHDC1Q9NTX5 307 aa17.01■□□□□ 0.31
COMMD4-201ENST00000267935 FBXO28Q9NVF7 368 aa17.01■□□□□ 0.31
COMMD4-201ENST00000267935 NYAP2Q9P242 653 aa17.01■□□□□ 0.31
COMMD4-201ENST00000267935 PHF24Q9UPV7 400 aa17.01■□□□□ 0.31
COMMD4-201ENST00000267935 MINDY4BA8MYZ0 360 aa17■□□□□ 0.31
COMMD4-201ENST00000267935 GNAT2P19087 354 aa17■□□□□ 0.31
COMMD4-201ENST00000267935 TLE2Q04725 743 aa17■□□□□ 0.31
COMMD4-201ENST00000267935 NUP133Q8WUM0 1156 aa17■□□□□ 0.31
COMMD4-201ENST00000267935 STRBPQ96SI9 672 aaKnown RBP17■□□□□ 0.31
COMMD4-201ENST00000267935 TSEN34Q9BSV6 310 aaKnown RBP17■□□□□ 0.31
COMMD4-201ENST00000267935 RCAN3Q9UKA8 241 aa17■□□□□ 0.31
COMMD4-201ENST00000267935 FAM184BQ9ULE4 1060 aa17■□□□□ 0.31
COMMD4-201ENST00000267935 LAMA3Q16787 3333 aa16.99■□□□□ 0.31
COMMD4-201ENST00000267935 ZNF236Q9UL36 1845 aa16.99■□□□□ 0.31
COMMD4-201ENST00000267935 F5H6K3 240 aa16.99■□□□□ 0.31
COMMD4-201ENST00000267935 PGK1P00558 417 aa16.99■□□□□ 0.31
COMMD4-201ENST00000267935 ZFYP08048 801 aaPredicted RBP16.99■□□□□ 0.31
COMMD4-201ENST00000267935 RAG1P15918 1043 aa16.99■□□□□ 0.31
COMMD4-201ENST00000267935 KLRC3Q07444 240 aa16.99■□□□□ 0.31
COMMD4-201ENST00000267935 FAM161BQ96MY7 647 aa16.99■□□□□ 0.31
COMMD4-201ENST00000267935 SPC25Q9HBM1 224 aa16.99■□□□□ 0.31
COMMD4-201ENST00000267935 PDLIM7Q9NR12 457 aa16.99■□□□□ 0.31
COMMD4-201ENST00000267935 ZNF214Q9UL59 606 aaPredicted RBP16.99■□□□□ 0.31
COMMD4-201ENST00000267935 MYH8P13535 1937 aa16.98■□□□□ 0.31
COMMD4-201ENST00000267935 ZNFX1Q9P2E3 1918 aaKnown RBP16.98■□□□□ 0.31
COMMD4-201ENST00000267935 DCDC2CA8MYV0 355 aa16.98■□□□□ 0.31
COMMD4-201ENST00000267935 APPP05067 770 aa16.98■□□□□ 0.31
COMMD4-201ENST00000267935 CLTBP09497 229 aa16.98■□□□□ 0.31
COMMD4-201ENST00000267935 SLC4A3P48751 1232 aa16.98■□□□□ 0.31
COMMD4-201ENST00000267935 SMAD3P84022 425 aaKnown RBP16.98■□□□□ 0.31
COMMD4-201ENST00000267935 SNRNP48Q6IEG0 339 aaKnown RBP16.98■□□□□ 0.31
COMMD4-201ENST00000267935 KBTBD3Q8NAB2 608 aa16.98■□□□□ 0.31
COMMD4-201ENST00000267935 CLIP2Q9UDT6 1046 aa16.98■□□□□ 0.31
COMMD4-201ENST00000267935 SMCHD1A6NHR9 2005 aa16.97■□□□□ 0.31
COMMD4-201ENST00000267935 TRIM43BA6NCK2 446 aa16.97■□□□□ 0.31
COMMD4-201ENST00000267935 RNF113AO15541 343 aaKnown RBP16.97■□□□□ 0.31
COMMD4-201ENST00000267935 SLC3A2P08195 630 aaKnown RBP16.97■□□□□ 0.31
COMMD4-201ENST00000267935 TDO2P48775 406 aa16.97■□□□□ 0.31
COMMD4-201ENST00000267935 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.97■□□□□ 0.31
COMMD4-201ENST00000267935 APPBP2Q92624 585 aa16.97■□□□□ 0.31
COMMD4-201ENST00000267935 TRIM43Q96BQ3 446 aaPredicted RBP16.97■□□□□ 0.31
COMMD4-201ENST00000267935 TOX2Q96NM4 488 aa16.97■□□□□ 0.31
COMMD4-201ENST00000267935 GUCD1Q96NT3 240 aa16.97■□□□□ 0.31
COMMD4-201ENST00000267935 NACAP1Q9BZK3 213 aa16.97■□□□□ 0.31
COMMD4-201ENST00000267935 SEMA6BQ9H3T3 888 aa16.97■□□□□ 0.31
COMMD4-201ENST00000267935 TMEM39AQ9NV64 488 aa16.97■□□□□ 0.31
COMMD4-201ENST00000267935 FBXO40Q9UH90 709 aa16.97■□□□□ 0.31
COMMD4-201ENST00000267935 FEM1BQ9UK73 627 aa16.97■□□□□ 0.31
COMMD4-201ENST00000267935 SYNPO2Q9UMS6 1093 aa16.97■□□□□ 0.31
COMMD4-201ENST00000267935 FRMPD3Q5JV73 1810 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms