RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 ATP1A2P50993 1020 aa13.25□□□□□ -0.29
SRRM4-201ENST00000267260 SLMAPQ14BN4 828 aa13.25□□□□□ -0.29
SRRM4-201ENST00000267260 GUCY2FP51841 1108 aa13.25□□□□□ -0.29
SRRM4-201ENST00000267260 OCA2Q04671 838 aa13.25□□□□□ -0.29
SRRM4-201ENST00000267260 IGHDP01880 384 aa13.25□□□□□ -0.29
SRRM4-201ENST00000267260 SF3A3Q12874 501 aaKnown RBP eCLIP13.25□□□□□ -0.29
SRRM4-201ENST00000267260 NOD1Q9Y239 953 aa13.25□□□□□ -0.29
SRRM4-201ENST00000267260 XRCC5P13010 732 aaKnown RBP13.25□□□□□ -0.29
SRRM4-201ENST00000267260 BRD2P25440 801 aaKnown RBP13.25□□□□□ -0.29
SRRM4-201ENST00000267260 DYNC1I2Q13409 638 aaKnown RBP13.25□□□□□ -0.29
SRRM4-201ENST00000267260 MAGI1Q96QZ7 1491 aaPredicted RBP13.24□□□□□ -0.29
SRRM4-201ENST00000267260 MAGEA1P43355 309 aa13.24□□□□□ -0.29
SRRM4-201ENST00000267260 ZNF174Q15697 407 aa13.24□□□□□ -0.29
SRRM4-201ENST00000267260 ZNF219Q9P2Y4 722 aaPredicted RBP13.24□□□□□ -0.29
SRRM4-201ENST00000267260 DENND2AQ9ULE3 1009 aa13.24□□□□□ -0.29
SRRM4-201ENST00000267260 NME8Q8N427 588 aa13.24□□□□□ -0.29
SRRM4-201ENST00000267260 CFAP43Q8NDM7 1665 aa13.24□□□□□ -0.29
SRRM4-201ENST00000267260 HARSP12081 509 aaKnown RBP13.24□□□□□ -0.29
SRRM4-201ENST00000267260 TRIM15Q9C019 465 aa13.24□□□□□ -0.29
SRRM4-201ENST00000267260 POLR2BP30876 1174 aaKnown RBP13.24□□□□□ -0.29
SRRM4-201ENST00000267260 TAF11Q15544 211 aa13.24□□□□□ -0.29
SRRM4-201ENST00000267260 MYCT1Q8N699 235 aa13.24□□□□□ -0.29
SRRM4-201ENST00000267260 PACSIN2Q9UNF0 486 aaPredicted RBP13.24□□□□□ -0.29
SRRM4-201ENST00000267260 AOX1Q06278 1338 aa13.24□□□□□ -0.29
SRRM4-201ENST00000267260 TTI1O43156 1089 aa13.24□□□□□ -0.29
SRRM4-201ENST00000267260 ZRANB2O95218 330 aaKnown RBP eCLIP13.24□□□□□ -0.29
SRRM4-201ENST00000267260 SRGAP2BP0DMP2 458 aa13.24□□□□□ -0.29
SRRM4-201ENST00000267260 ZNF445P59923 1031 aa13.24□□□□□ -0.29
SRRM4-201ENST00000267260 NBPF14Q5TI25 921 aa13.24□□□□□ -0.29
SRRM4-201ENST00000267260 JPH2Q9BR39 696 aaPredicted RBP13.24□□□□□ -0.29
SRRM4-201ENST00000267260 TRIM55Q9BYV6 548 aa13.24□□□□□ -0.29
SRRM4-201ENST00000267260 ZFYVE9O95405 1425 aa13.24□□□□□ -0.29
SRRM4-201ENST00000267260 MRC2Q9UBG0 1479 aa13.24□□□□□ -0.29
SRRM4-201ENST00000267260 A0A1B0GW55 424 aa13.24□□□□□ -0.29
SRRM4-201ENST00000267260 DUX4L2P0CJ85 424 aa13.24□□□□□ -0.29
SRRM4-201ENST00000267260 DUX4L3P0CJ86 424 aa13.24□□□□□ -0.29
SRRM4-201ENST00000267260 DUX4L4P0CJ87 422 aa13.24□□□□□ -0.29
SRRM4-201ENST00000267260 DUX4L5P0CJ88 424 aa13.24□□□□□ -0.29
SRRM4-201ENST00000267260 DUX4L6P0CJ89 424 aa13.24□□□□□ -0.29
SRRM4-201ENST00000267260 DUX4L7P0CJ90 424 aa13.24□□□□□ -0.29
SRRM4-201ENST00000267260 SEPT2Q15019 361 aa13.24□□□□□ -0.29
SRRM4-201ENST00000267260 DUX4Q9UBX2 424 aa13.24□□□□□ -0.29
SRRM4-201ENST00000267260 PASKQ96RG2 1323 aa13.24□□□□□ -0.29
SRRM4-201ENST00000267260 CDK13Q14004 1512 aaKnown RBP13.24□□□□□ -0.29
SRRM4-201ENST00000267260 ZBBXA8MT70 800 aa13.23□□□□□ -0.29
SRRM4-201ENST00000267260 TTC1Q99614 292 aa13.23□□□□□ -0.29
SRRM4-201ENST00000267260 AQRO60306 1485 aaKnown RBP eCLIP13.23□□□□□ -0.29
SRRM4-201ENST00000267260 MAST3O60307 1309 aa13.23□□□□□ -0.29
SRRM4-201ENST00000267260 LPXNO60711 386 aa13.23□□□□□ -0.29
SRRM4-201ENST00000267260 ADCY8P40145 1251 aa13.23□□□□□ -0.29
SRRM4-201ENST00000267260 ECE1P42892 770 aa13.23□□□□□ -0.29
SRRM4-201ENST00000267260 ARHGEF11O15085 1522 aa13.23□□□□□ -0.29
SRRM4-201ENST00000267260 ZNF449Q6P9G9 518 aa13.23□□□□□ -0.29
SRRM4-201ENST00000267260 MCF2P10911 925 aa13.23□□□□□ -0.29
SRRM4-201ENST00000267260 SRRM1Q8IYB3 904 aaKnown RBP13.23□□□□□ -0.29
SRRM4-201ENST00000267260 PLIN2Q99541 437 aa13.23□□□□□ -0.29
SRRM4-201ENST00000267260 TRPA1O75762 1119 aa13.23□□□□□ -0.29
SRRM4-201ENST00000267260 SERPINI1Q99574 410 aa13.23□□□□□ -0.29
SRRM4-201ENST00000267260 BCL2L12Q9HB09 334 aa13.23□□□□□ -0.29
SRRM4-201ENST00000267260 IFT88Q13099 833 aa13.23□□□□□ -0.29
SRRM4-201ENST00000267260 NGLY1Q96IV0 654 aa13.23□□□□□ -0.29
SRRM4-201ENST00000267260 HDAC11Q96DB2 347 aa13.23□□□□□ -0.29
SRRM4-201ENST00000267260 RPRD2Q5VT52 1461 aaKnown RBP13.22□□□□□ -0.29
SRRM4-201ENST00000267260 F8W031 263 aaPredicted RBP13.22□□□□□ -0.29
SRRM4-201ENST00000267260 AZI2Q9H6S1 392 aa13.22□□□□□ -0.29
SRRM4-201ENST00000267260 CASP2P42575 452 aa13.22□□□□□ -0.29
SRRM4-201ENST00000267260 KRT25Q7Z3Z0 450 aa13.22□□□□□ -0.29
SRRM4-201ENST00000267260 IFT122Q9HBG6 1241 aa13.22□□□□□ -0.29
SRRM4-201ENST00000267260 HYOU1Q9Y4L1 999 aa13.22□□□□□ -0.29
SRRM4-201ENST00000267260 BZW2Q9Y6E2 419 aaKnown RBP13.22□□□□□ -0.29
SRRM4-201ENST00000267260 H0YCG3 227 aa13.22□□□□□ -0.29
SRRM4-201ENST00000267260 RFX1P22670 979 aa13.22□□□□□ -0.29
SRRM4-201ENST00000267260 HOXA7P31268 230 aaPredicted RBP13.22□□□□□ -0.29
SRRM4-201ENST00000267260 CCT5P48643 541 aa13.22□□□□□ -0.29
SRRM4-201ENST00000267260 TTC19Q6DKK2 380 aaPredicted RBP13.22□□□□□ -0.29
SRRM4-201ENST00000267260 C2CD5Q86YS7 1000 aa13.22□□□□□ -0.29
SRRM4-201ENST00000267260 PRPF38AQ8NAV1 312 aaKnown RBP13.22□□□□□ -0.29
SRRM4-201ENST00000267260 KPNA2P52292 529 aaKnown RBP13.22□□□□□ -0.29
SRRM4-201ENST00000267260 SNX1Q13596 522 aa13.22□□□□□ -0.29
SRRM4-201ENST00000267260 CHST3Q7LGC8 479 aa13.22□□□□□ -0.29
SRRM4-201ENST00000267260 FAM186BQ8IYM0 893 aa13.22□□□□□ -0.29
SRRM4-201ENST00000267260 KRT82Q9NSB4 513 aa13.22□□□□□ -0.29
SRRM4-201ENST00000267260 KIF1CO43896 1103 aaKnown RBP13.22□□□□□ -0.29
SRRM4-201ENST00000267260 ATF2P15336 505 aa13.22□□□□□ -0.29
SRRM4-201ENST00000267260 TTC38Q5R3I4 469 aa13.22□□□□□ -0.29
SRRM4-201ENST00000267260 POMGNT1Q8WZA1 660 aa13.22□□□□□ -0.29
SRRM4-201ENST00000267260 PSMB7Q99436 277 aa13.22□□□□□ -0.29
SRRM4-201ENST00000267260 ACTR5Q9H9F9 607 aaPredicted RBP13.22□□□□□ -0.29
SRRM4-201ENST00000267260 F8W8V4 182 aa13.22□□□□□ -0.29
SRRM4-201ENST00000267260 INHBAP08476 426 aa13.22□□□□□ -0.29
SRRM4-201ENST00000267260 STX1BP61266 288 aa13.22□□□□□ -0.29
SRRM4-201ENST00000267260 CEP70Q8NHQ1 597 aa13.22□□□□□ -0.29
SRRM4-201ENST00000267260 MEIS3Q99687 375 aa13.22□□□□□ -0.29
SRRM4-201ENST00000267260 WDR7Q9Y4E6 1490 aa13.22□□□□□ -0.29
SRRM4-201ENST00000267260 PHF8Q9UPP1 1060 aa13.21□□□□□ -0.29
SRRM4-201ENST00000267260 NR1I2O75469 434 aa13.21□□□□□ -0.29
SRRM4-201ENST00000267260 PPARDQ03181 441 aa13.21□□□□□ -0.29
SRRM4-201ENST00000267260 NME9Q86XW9 330 aa13.21□□□□□ -0.29
SRRM4-201ENST00000267260 CCHCR1Q8TD31 782 aa13.21□□□□□ -0.29
SRRM4-201ENST00000267260 GCC2Q8IWJ2 1684 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms