RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 ASPRV1Q53RT3 343 aa13.3□□□□□ -0.28
SCAF11-201ENST00000266589 FAM151AQ8WW52 585 aa13.3□□□□□ -0.28
SCAF11-201ENST00000266589 SH3GLB2Q9NR46 395 aa13.3□□□□□ -0.28
SCAF11-201ENST00000266589 CNTNAP1P78357 1384 aa13.29□□□□□ -0.28
SCAF11-201ENST00000266589 FAM205CA6NFA0 338 aa13.29□□□□□ -0.28
SCAF11-201ENST00000266589 GDF11O95390 407 aa13.29□□□□□ -0.28
SCAF11-201ENST00000266589 SNHG28P0DPA3 235 aa13.29□□□□□ -0.28
SCAF11-201ENST00000266589 FAM160A1Q05DH4 1040 aa13.29□□□□□ -0.28
SCAF11-201ENST00000266589 MAP3K11Q16584 847 aa13.29□□□□□ -0.28
SCAF11-201ENST00000266589 WWC2Q6AWC2 1192 aa13.29□□□□□ -0.28
SCAF11-201ENST00000266589 HEATR3Q7Z4Q2 680 aa13.29□□□□□ -0.28
SCAF11-201ENST00000266589 JMYQ8N9B5 988 aa13.29□□□□□ -0.28
SCAF11-201ENST00000266589 TNFRSF25Q93038 417 aa13.29□□□□□ -0.28
SCAF11-201ENST00000266589 SHTN1A0MZ66 631 aa13.28□□□□□ -0.28
SCAF11-201ENST00000266589 MYO1BO43795 1136 aa13.28□□□□□ -0.28
SCAF11-201ENST00000266589 CALML3P27482 149 aa13.28□□□□□ -0.28
SCAF11-201ENST00000266589 SMARCA1P28370 1054 aa13.28□□□□□ -0.28
SCAF11-201ENST00000266589 ABCB5Q2M3G0 1257 aa13.28□□□□□ -0.28
SCAF11-201ENST00000266589 EARS2Q5JPH6 523 aaKnown RBP13.28□□□□□ -0.28
SCAF11-201ENST00000266589 AXDND1Q5T1B0 1012 aaPredicted RBP13.28□□□□□ -0.28
SCAF11-201ENST00000266589 TMEM179Q6ZVK1 233 aa13.28□□□□□ -0.28
SCAF11-201ENST00000266589 HOMER1Q86YM7 354 aa13.28□□□□□ -0.28
SCAF11-201ENST00000266589 KANSL2Q9H9L4 492 aa13.28□□□□□ -0.28
SCAF11-201ENST00000266589 MYOZ2Q9NPC6 264 aa13.28□□□□□ -0.28
SCAF11-201ENST00000266589 PCDHB6Q9Y5E3 794 aa13.28□□□□□ -0.28
SCAF11-201ENST00000266589 A0A1B0GVL5 298 aa13.28□□□□□ -0.28
SCAF11-201ENST00000266589 WNT10BO00744 389 aa13.28□□□□□ -0.28
SCAF11-201ENST00000266589 EEF2P13639 858 aaKnown RBP13.28□□□□□ -0.28
SCAF11-201ENST00000266589 ATP2B1P20020 1258 aa13.28□□□□□ -0.28
SCAF11-201ENST00000266589 PRELPP51888 382 aa13.28□□□□□ -0.28
SCAF11-201ENST00000266589 SNW1Q13573 536 aaKnown RBP13.28□□□□□ -0.28
SCAF11-201ENST00000266589 SEPT2Q15019 361 aa13.28□□□□□ -0.28
SCAF11-201ENST00000266589 TYW1BQ6NUM6 668 aa13.28□□□□□ -0.28
SCAF11-201ENST00000266589 ENGASEQ8NFI3 743 aa13.28□□□□□ -0.28
SCAF11-201ENST00000266589 CCDC148Q8NFR7 591 aa13.28□□□□□ -0.28
SCAF11-201ENST00000266589 RRP36Q96EU6 259 aaKnown RBP13.28□□□□□ -0.28
SCAF11-201ENST00000266589 ZBED3Q96IU2 234 aaPredicted RBP13.28□□□□□ -0.28
SCAF11-201ENST00000266589 UBA5Q9GZZ9 404 aa13.28□□□□□ -0.28
SCAF11-201ENST00000266589 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.28□□□□□ -0.28
SCAF11-201ENST00000266589 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.28□□□□□ -0.28
SCAF11-201ENST00000266589 BARHL2Q9NY43 387 aa13.28□□□□□ -0.28
SCAF11-201ENST00000266589 SEC63Q9UGP8 760 aaKnown RBP13.28□□□□□ -0.28
SCAF11-201ENST00000266589 HERC5Q9UII4 1024 aaKnown RBP13.28□□□□□ -0.28
SCAF11-201ENST00000266589 STXBP3O00186 592 aa13.27□□□□□ -0.28
SCAF11-201ENST00000266589 KINO60870 393 aaKnown RBP13.27□□□□□ -0.28
SCAF11-201ENST00000266589 RPS12P25398 132 aaKnown RBP13.27□□□□□ -0.28
SCAF11-201ENST00000266589 ICA1Q05084 483 aa13.27□□□□□ -0.28
SCAF11-201ENST00000266589 ZNF543Q08ER8 600 aa13.27□□□□□ -0.28
SCAF11-201ENST00000266589 NBPF9Q3BBW0 867 aa13.27□□□□□ -0.28
SCAF11-201ENST00000266589 NOM1Q5C9Z4 860 aaKnown RBP13.27□□□□□ -0.28
SCAF11-201ENST00000266589 FKBP1CQ5VVH2 108 aa13.27□□□□□ -0.28
SCAF11-201ENST00000266589 CKAP2LQ8IYA6 745 aa13.27□□□□□ -0.28
SCAF11-201ENST00000266589 BLIDQ8IZY5 108 aa13.27□□□□□ -0.28
SCAF11-201ENST00000266589 FUCA2Q9BTY2 467 aa13.27□□□□□ -0.28
SCAF11-201ENST00000266589 RIOX1Q9H6W3 641 aa13.27□□□□□ -0.28
SCAF11-201ENST00000266589 SPON1Q9HCB6 807 aa13.27□□□□□ -0.28
SCAF11-201ENST00000266589 VAT1LQ9HCJ6 419 aa13.27□□□□□ -0.28
SCAF11-201ENST00000266589 GPCPD1Q9NPB8 672 aa13.27□□□□□ -0.28
SCAF11-201ENST00000266589 NYAP2Q9P242 653 aa13.27□□□□□ -0.28
SCAF11-201ENST00000266589 NOL7Q9UMY1 257 aaKnown RBP13.27□□□□□ -0.28
SCAF11-201ENST00000266589 CMA1P23946 247 aa13.27□□□□□ -0.29
SCAF11-201ENST00000266589 NDUFA8P51970 172 aa13.27□□□□□ -0.29
SCAF11-201ENST00000266589 CCDC96Q2M329 555 aa13.27□□□□□ -0.29
SCAF11-201ENST00000266589 RBM26Q5T8P6 1007 aaKnown RBP13.27□□□□□ -0.29
SCAF11-201ENST00000266589 RBM43Q6ZSC3 357 aaKnown RBP13.27□□□□□ -0.29
SCAF11-201ENST00000266589 FMR1NBQ8N0W7 255 aaPredicted RBP13.27□□□□□ -0.29
SCAF11-201ENST00000266589 RNF214Q8ND24 703 aa13.27□□□□□ -0.29
SCAF11-201ENST00000266589 PIGSQ96S52 555 aa13.27□□□□□ -0.29
SCAF11-201ENST00000266589 TMEM39BQ9GZU3 492 aa13.27□□□□□ -0.29
SCAF11-201ENST00000266589 PCDHA4Q9UN74 947 aa13.27□□□□□ -0.29
SCAF11-201ENST00000266589 CEP131Q9UPN4 1083 aa13.27□□□□□ -0.29
SCAF11-201ENST00000266589 TRIM75PA6NK02 468 aa13.26□□□□□ -0.29
SCAF11-201ENST00000266589 FZD9O00144 591 aa13.26□□□□□ -0.29
SCAF11-201ENST00000266589 ADAMTS3O15072 1205 aa13.26□□□□□ -0.29
SCAF11-201ENST00000266589 CUTAO60888 179 aa13.26□□□□□ -0.29
SCAF11-201ENST00000266589 GH2P01242 217 aa13.26□□□□□ -0.29
SCAF11-201ENST00000266589 ZNF280AP59817 542 aaPredicted RBP13.26□□□□□ -0.29
SCAF11-201ENST00000266589 PIK3AP1Q6ZUJ8 805 aa13.26□□□□□ -0.29
SCAF11-201ENST00000266589 FAM83AQ86UY5 434 aa13.26□□□□□ -0.29
SCAF11-201ENST00000266589 MKL1Q969V6 931 aa13.26□□□□□ -0.29
SCAF11-201ENST00000266589 GJA3Q9Y6H8 435 aa13.26□□□□□ -0.29
SCAF11-201ENST00000266589 RAD21O60216 631 aa13.25□□□□□ -0.29
SCAF11-201ENST00000266589 CCDC192P0DO97 292 aa13.25□□□□□ -0.29
SCAF11-201ENST00000266589 PFKFB1P16118 471 aa13.25□□□□□ -0.29
SCAF11-201ENST00000266589 GMPSP49915 693 aaPredicted RBP13.25□□□□□ -0.29
SCAF11-201ENST00000266589 MMP14P50281 582 aa13.25□□□□□ -0.29
SCAF11-201ENST00000266589 NAPAP54920 295 aa13.25□□□□□ -0.29
SCAF11-201ENST00000266589 JAG1P78504 1218 aa13.25□□□□□ -0.29
SCAF11-201ENST00000266589 RRP1BQ14684 758 aaKnown RBP13.25□□□□□ -0.29
SCAF11-201ENST00000266589 GPATCH4Q5T3I0 446 aaKnown RBP13.25□□□□□ -0.29
SCAF11-201ENST00000266589 CDAN1Q8IWY9 1227 aa13.25□□□□□ -0.29
SCAF11-201ENST00000266589 FAM177A1Q8N128 213 aaPredicted RBP13.25□□□□□ -0.29
SCAF11-201ENST00000266589 KRI1Q8N9T8 703 aaKnown RBP13.25□□□□□ -0.29
SCAF11-201ENST00000266589 CLIC6Q96NY7 704 aa13.25□□□□□ -0.29
SCAF11-201ENST00000266589 EGFRP00533 1210 aa13.25□□□□□ -0.29
SCAF11-201ENST00000266589 TTC38Q5R3I4 469 aa13.25□□□□□ -0.29
SCAF11-201ENST00000266589 GALNT17Q6IS24 598 aa13.25□□□□□ -0.29
SCAF11-201ENST00000266589 SHC4Q6S5L8 630 aa13.25□□□□□ -0.29
SCAF11-201ENST00000266589 KCTD1Q719H9 257 aa13.25□□□□□ -0.29
SCAF11-201ENST00000266589 SIAH1Q8IUQ4 282 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms