RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 AFDNP55196 1824 aaKnown RBP12.94□□□□□ -0.34
CLSTN3-201ENST00000266546 CRYBG1Q9Y4K1 1723 aa12.94□□□□□ -0.34
CLSTN3-201ENST00000266546 FGFR2P21802 821 aa12.94□□□□□ -0.34
CLSTN3-201ENST00000266546 NSUN7Q8NE18 718 aaKnown RBP12.94□□□□□ -0.34
CLSTN3-201ENST00000266546 WDR19Q8NEZ3 1342 aa12.94□□□□□ -0.34
CLSTN3-201ENST00000266546 PLCH1Q4KWH8 1693 aa12.94□□□□□ -0.34
CLSTN3-201ENST00000266546 RIMBP2O15034 1052 aa12.94□□□□□ -0.34
CLSTN3-201ENST00000266546 MMP10P09238 476 aa12.94□□□□□ -0.34
CLSTN3-201ENST00000266546 ACTN2P35609 894 aa12.94□□□□□ -0.34
CLSTN3-201ENST00000266546 CYP26C1Q6V0L0 522 aa12.94□□□□□ -0.34
CLSTN3-201ENST00000266546 CRACR2BQ8N4Y2 399 aaPredicted RBP12.94□□□□□ -0.34
CLSTN3-201ENST00000266546 STRBPQ96SI9 672 aaKnown RBP12.94□□□□□ -0.34
CLSTN3-201ENST00000266546 CLIC4Q9Y696 253 aa12.94□□□□□ -0.34
CLSTN3-201ENST00000266546 NDUFAB1O14561 156 aa12.93□□□□□ -0.34
CLSTN3-201ENST00000266546 ATP2C2O75185 946 aa12.93□□□□□ -0.34
CLSTN3-201ENST00000266546 INPP5BP32019 993 aa12.93□□□□□ -0.34
CLSTN3-201ENST00000266546 VAV2P52735 878 aa12.93□□□□□ -0.34
CLSTN3-201ENST00000266546 GRIPAP1Q4V328 841 aa12.93□□□□□ -0.34
CLSTN3-201ENST00000266546 TEX11Q8IYF3 940 aa12.93□□□□□ -0.34
CLSTN3-201ENST00000266546 KCNB2Q92953 911 aa12.93□□□□□ -0.34
CLSTN3-201ENST00000266546 CCDC151A5D8V7 595 aa12.93□□□□□ -0.34
CLSTN3-201ENST00000266546 KRT9P35527 623 aa12.93□□□□□ -0.34
CLSTN3-201ENST00000266546 STAT6P42226 847 aa12.93□□□□□ -0.34
CLSTN3-201ENST00000266546 PPARAQ07869 468 aa12.93□□□□□ -0.34
CLSTN3-201ENST00000266546 EXOC4Q96A65 974 aa12.93□□□□□ -0.34
CLSTN3-201ENST00000266546 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.93□□□□□ -0.34
CLSTN3-201ENST00000266546 RABEP2Q9H5N1 569 aa12.93□□□□□ -0.34
CLSTN3-201ENST00000266546 TCP11L1Q9NUJ3 509 aa12.93□□□□□ -0.34
CLSTN3-201ENST00000266546 RBM28Q9NW13 759 aaKnown RBP12.93□□□□□ -0.34
CLSTN3-201ENST00000266546 SYNRGQ9UMZ2 1314 aa12.93□□□□□ -0.34
CLSTN3-201ENST00000266546 SIPA1L3O60292 1781 aaPredicted RBP12.93□□□□□ -0.34
CLSTN3-201ENST00000266546 IKBKBO14920 756 aa12.93□□□□□ -0.34
CLSTN3-201ENST00000266546 MTA3Q9BTC8 594 aa12.93□□□□□ -0.34
CLSTN3-201ENST00000266546 CCDC113Q9H0I3 377 aa12.93□□□□□ -0.34
CLSTN3-201ENST00000266546 MYCNP04198 464 aaPredicted RBP12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 GOLGA8FQ08AF8 430 aa12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 GOLGA8DPQ0D2H9 430 aa12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 GBP6Q6ZN66 633 aa12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 DIS3L2Q8IYB7 885 aaKnown RBP12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 IQUBQ8NA54 791 aa12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 FBXO18Q8NFZ0 1043 aa12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 DYDC1Q8WWB3 177 aa12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 PHKBQ93100 1093 aa12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 TSG101Q99816 390 aa12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 MYL10Q9BUA6 226 aa12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 PARD6BQ9BYG5 372 aa12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 AATFQ9NY61 560 aaKnown RBP eCLIP12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 IDEP14735 1019 aa12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 PDIA3P30101 505 aaKnown RBP12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 SCARF1Q14162 830 aa12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 CEP57Q86XR8 500 aa12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 SP8Q8IXZ3 490 aa12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 COA1Q9GZY4 146 aa12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 CABP5Q9NP86 173 aa12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 STX8Q9UNK0 236 aa12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 C5P01031 1676 aa12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 PNPLA7Q6ZV29 1317 aa12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 TSPY3P0CV98 308 aa12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 TSPY8P0CW00 308 aa12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 TRIM14Q14142 442 aa12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 MFSD14BQ5SR56 506 aa12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 SRGAP1Q7Z6B7 1085 aa12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 FAM84BQ96KN1 310 aaPredicted RBP12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 GDAP1L1Q96MZ0 367 aa12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 SLF1Q9BQI6 1058 aa12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 IL25Q9H293 177 aa12.92□□□□□ -0.34
CLSTN3-201ENST00000266546 GOLGA6BA6NDN3 693 aa12.91□□□□□ -0.34
CLSTN3-201ENST00000266546 GYS1P13807 737 aa12.91□□□□□ -0.34
CLSTN3-201ENST00000266546 GPR162Q16538 588 aa12.91□□□□□ -0.34
CLSTN3-201ENST00000266546 LONRF3Q496Y0 759 aa12.91□□□□□ -0.34
CLSTN3-201ENST00000266546 B4GALNT4Q76KP1 1039 aa12.91□□□□□ -0.34
CLSTN3-201ENST00000266546 MACROD2A1Z1Q3 448 aa12.91□□□□□ -0.34
CLSTN3-201ENST00000266546 ZBTB22O15209 634 aa12.91□□□□□ -0.34
CLSTN3-201ENST00000266546 WHAMMP3Q1A5X7 153 aa12.91□□□□□ -0.34
CLSTN3-201ENST00000266546 CFAP58Q5T655 872 aa12.91□□□□□ -0.34
CLSTN3-201ENST00000266546 POTEDQ86YR6 584 aa12.91□□□□□ -0.34
CLSTN3-201ENST00000266546 CDC23Q9UJX2 597 aa12.91□□□□□ -0.34
CLSTN3-201ENST00000266546 TMCO5BA8MYB1 307 aa12.91□□□□□ -0.34
CLSTN3-201ENST00000266546 MAP2K1Q02750 393 aaPredicted RBP12.91□□□□□ -0.34
CLSTN3-201ENST00000266546 LINC00301Q8NCQ3 95 aa12.91□□□□□ -0.34
CLSTN3-201ENST00000266546 PCDHA5Q9Y5H7 936 aa12.91□□□□□ -0.34
CLSTN3-201ENST00000266546 IRX5P78411 483 aaPredicted RBP12.91□□□□□ -0.34
CLSTN3-201ENST00000266546 AMPD3Q01432 767 aa12.91□□□□□ -0.34
CLSTN3-201ENST00000266546 CTDSPL2Q05D32 466 aa12.91□□□□□ -0.34
CLSTN3-201ENST00000266546 PTPN21Q16825 1174 aa12.91□□□□□ -0.34
CLSTN3-201ENST00000266546 CCDC121Q6ZUS5 278 aa12.91□□□□□ -0.34
CLSTN3-201ENST00000266546 OGFOD1Q8N543 542 aa12.91□□□□□ -0.34
CLSTN3-201ENST00000266546 ARFGAP2Q8N6H7 521 aa12.91□□□□□ -0.34
CLSTN3-201ENST00000266546 FAM71BQ8TC56 605 aa12.91□□□□□ -0.34
CLSTN3-201ENST00000266546 MED4Q9NPJ6 270 aa12.91□□□□□ -0.34
CLSTN3-201ENST00000266546 CTNND2Q9UQB3 1225 aa12.91□□□□□ -0.34
CLSTN3-201ENST00000266546 MYO1CO00159 1063 aa12.9□□□□□ -0.34
CLSTN3-201ENST00000266546 PRDM1O75626 825 aa12.9□□□□□ -0.34
CLSTN3-201ENST00000266546 GBP2P32456 591 aaPredicted RBP12.9□□□□□ -0.34
CLSTN3-201ENST00000266546 FBXO33Q7Z6M2 555 aa12.9□□□□□ -0.34
CLSTN3-201ENST00000266546 ATP1A3P13637 1013 aa12.9□□□□□ -0.34
CLSTN3-201ENST00000266546 EZRP15311 586 aaKnown RBP12.9□□□□□ -0.34
CLSTN3-201ENST00000266546 NOP2P46087 812 aaKnown RBP12.9□□□□□ -0.34
CLSTN3-201ENST00000266546 ZNF827Q17R98 1081 aa12.9□□□□□ -0.34
CLSTN3-201ENST00000266546 MSL1Q68DK7 614 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms