RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 PTGDRQ13258 359 aa17.17■□□□□ 0.34
TIMP3-201ENST00000266085 TBC1D9BQ66K14 1250 aa17.17■□□□□ 0.34
TIMP3-201ENST00000266085 CLIC6Q96NY7 704 aa17.17■□□□□ 0.34
TIMP3-201ENST00000266085 AZI2Q9H6S1 392 aa17.17■□□□□ 0.34
TIMP3-201ENST00000266085 MRPL11Q9Y3B7 192 aaKnown RBP17.17■□□□□ 0.34
TIMP3-201ENST00000266085 ARHGAP6O43182 974 aa17.17■□□□□ 0.34
TIMP3-201ENST00000266085 FLOT1O75955 427 aa17.17■□□□□ 0.34
TIMP3-201ENST00000266085 NELFBQ8WX92 580 aa17.17■□□□□ 0.34
TIMP3-201ENST00000266085 STRBPQ96SI9 672 aaKnown RBP17.17■□□□□ 0.34
TIMP3-201ENST00000266085 GTF2F1P35269 517 aaKnown RBP eCLIP17.17■□□□□ 0.342e-12■■■■■ 44.8
TIMP3-201ENST00000266085 CCDC93Q567U6 631 aa17.17■□□□□ 0.34
TIMP3-201ENST00000266085 GPATCH4Q5T3I0 446 aaKnown RBP17.17■□□□□ 0.34
TIMP3-201ENST00000266085 DYNLL2Q96FJ2 89 aa17.17■□□□□ 0.34
TIMP3-201ENST00000266085 TESPA1A2RU30 521 aaPredicted RBP17.16■□□□□ 0.34
TIMP3-201ENST00000266085 CUL4AQ13619 759 aa17.16■□□□□ 0.34
TIMP3-201ENST00000266085 MICALCLQ6ZW33 695 aa17.16■□□□□ 0.34
TIMP3-201ENST00000266085 OR52Z1P0C646 297 aa17.16■□□□□ 0.34
TIMP3-201ENST00000266085 VAV2P52735 878 aa17.16■□□□□ 0.34
TIMP3-201ENST00000266085 TMTC1Q8IUR5 882 aa17.16■□□□□ 0.34
TIMP3-201ENST00000266085 TRIM28Q13263 835 aaKnown RBP17.16■□□□□ 0.34
TIMP3-201ENST00000266085 GPHNQ9NQX3 736 aaPredicted RBP17.16■□□□□ 0.34
TIMP3-201ENST00000266085 SWAP70Q9UH65 585 aa17.16■□□□□ 0.34
TIMP3-201ENST00000266085 OVOS2A0A0G2JMS6 1433 aa17.16■□□□□ 0.34
TIMP3-201ENST00000266085 OVOS2A0A0J9YW53 1432 aa17.16■□□□□ 0.34
TIMP3-201ENST00000266085 OVOS2Q6IE36 1432 aa17.16■□□□□ 0.34
TIMP3-201ENST00000266085 AGLP35573 1532 aa17.16■□□□□ 0.34
TIMP3-201ENST00000266085 RIMBP3CA6NJZ7 1639 aa17.16■□□□□ 0.34
TIMP3-201ENST00000266085 RIMBP3BA6NNM3 1639 aa17.16■□□□□ 0.34
TIMP3-201ENST00000266085 RIMBP3Q9UFD9 1639 aa17.16■□□□□ 0.34
TIMP3-201ENST00000266085 GCNT3O95395 438 aa17.16■□□□□ 0.34
TIMP3-201ENST00000266085 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.16■□□□□ 0.34
TIMP3-201ENST00000266085 CCDC77Q9BR77 488 aa17.16■□□□□ 0.34
TIMP3-201ENST00000266085 MRPL44Q9H9J2 332 aaKnown RBP17.16■□□□□ 0.34
TIMP3-201ENST00000266085 CLIC4Q9Y696 253 aa17.16■□□□□ 0.34
TIMP3-201ENST00000266085 EXOC3O60645 756 aa17.15■□□□□ 0.34
TIMP3-201ENST00000266085 POLR2MP0CAP2 368 aa17.15■□□□□ 0.34
TIMP3-201ENST00000266085 PRDX5P30044 214 aa17.15■□□□□ 0.34
TIMP3-201ENST00000266085 STRN3Q13033 797 aa17.15■□□□□ 0.34
TIMP3-201ENST00000266085 MASTLQ96GX5 879 aa17.15■□□□□ 0.34
TIMP3-201ENST00000266085 CDHR2Q9BYE9 1310 aa17.15■□□□□ 0.34
TIMP3-201ENST00000266085 COA1Q9GZY4 146 aa17.15■□□□□ 0.34
TIMP3-201ENST00000266085 TTLL1O95922 423 aa17.15■□□□□ 0.34
TIMP3-201ENST00000266085 CYP2E1P05181 493 aaPredicted RBP17.15■□□□□ 0.34
TIMP3-201ENST00000266085 SLC9C1Q4G0N8 1177 aa17.15■□□□□ 0.34
TIMP3-201ENST00000266085 CCDC50Q8IVM0 306 aa17.15■□□□□ 0.34
TIMP3-201ENST00000266085 TTLL6Q8N841 843 aa17.15■□□□□ 0.34
TIMP3-201ENST00000266085 KANSL2Q9H9L4 492 aa17.15■□□□□ 0.34
TIMP3-201ENST00000266085 ATP2A1O14983 1001 aa17.15■□□□□ 0.34
TIMP3-201ENST00000266085 GDF11O95390 407 aa17.15■□□□□ 0.34
TIMP3-201ENST00000266085 ADRA2BP18089 450 aa17.15■□□□□ 0.34
TIMP3-201ENST00000266085 TNFAIP3P21580 790 aa17.15■□□□□ 0.34
TIMP3-201ENST00000266085 AMNQ9BXJ7 453 aa17.15■□□□□ 0.34
TIMP3-201ENST00000266085 NEXMIFQ5QGS0 1516 aa17.15■□□□□ 0.34
TIMP3-201ENST00000266085 SOS2Q07890 1332 aaPredicted RBP17.14■□□□□ 0.34
TIMP3-201ENST00000266085 KDM3AQ9Y4C1 1321 aa17.14■□□□□ 0.34
TIMP3-201ENST00000266085 RHOXF2BP0C7M4 288 aa17.14■□□□□ 0.34
TIMP3-201ENST00000266085 TNNC1P63316 161 aa17.14■□□□□ 0.34
TIMP3-201ENST00000266085 GRIPAP1Q4V328 841 aa17.14■□□□□ 0.34
TIMP3-201ENST00000266085 DCPSQ96C86 337 aaKnown RBP17.14■□□□□ 0.34
TIMP3-201ENST00000266085 RHOXF2Q9BQY4 288 aa17.14■□□□□ 0.34
TIMP3-201ENST00000266085 GSTA5Q7RTV2 222 aa17.14■□□□□ 0.33
TIMP3-201ENST00000266085 APBB1IPQ7Z5R6 666 aaPredicted RBP17.14■□□□□ 0.33
TIMP3-201ENST00000266085 KIFAP3Q92845 792 aa17.14■□□□□ 0.33
TIMP3-201ENST00000266085 XPO4Q9C0E2 1151 aaKnown RBP17.14■□□□□ 0.33
TIMP3-201ENST00000266085 NOD1Q9Y239 953 aa17.14■□□□□ 0.33
TIMP3-201ENST00000266085 CARMIL3Q8ND23 1372 aa17.14■□□□□ 0.33
TIMP3-201ENST00000266085 ZNF827Q17R98 1081 aa17.14■□□□□ 0.33
TIMP3-201ENST00000266085 SPECC1LQ69YQ0 1117 aa17.14■□□□□ 0.33
TIMP3-201ENST00000266085 SH2B2O14492 632 aaPredicted RBP17.14■□□□□ 0.33
TIMP3-201ENST00000266085 C21orf2O43822 256 aa17.14■□□□□ 0.33
TIMP3-201ENST00000266085 KRT5P13647 590 aa17.14■□□□□ 0.33
TIMP3-201ENST00000266085 RBM6P78332 1123 aaKnown RBP17.14■□□□□ 0.33
TIMP3-201ENST00000266085 RNF187Q5TA31 235 aaPredicted RBP17.14■□□□□ 0.33
TIMP3-201ENST00000266085 RASGRP4Q8TDF6 673 aa17.14■□□□□ 0.33
TIMP3-201ENST00000266085 GLG1Q92896 1179 aa17.14■□□□□ 0.33
TIMP3-201ENST00000266085 FAM107BQ9H098 131 aa17.14■□□□□ 0.33
TIMP3-201ENST00000266085 KIF4AO95239 1232 aa17.13■□□□□ 0.33
TIMP3-201ENST00000266085 LARGE1O95461 756 aa17.13■□□□□ 0.33
TIMP3-201ENST00000266085 IFNAR1P17181 557 aa17.13■□□□□ 0.33
TIMP3-201ENST00000266085 ASPRV1Q53RT3 343 aa17.13■□□□□ 0.33
TIMP3-201ENST00000266085 MIER3Q7Z3K6 550 aa17.13■□□□□ 0.33
TIMP3-201ENST00000266085 MTUS1Q9ULD2 1270 aa17.13■□□□□ 0.33
TIMP3-201ENST00000266085 GNPTABQ3T906 1256 aa17.13■□□□□ 0.33
TIMP3-201ENST00000266085 KCTD1Q719H9 257 aa17.13■□□□□ 0.33
TIMP3-201ENST00000266085 RTEL1Q9NZ71 1219 aa17.13■□□□□ 0.33
TIMP3-201ENST00000266085 PTPRUQ92729 1446 aa17.13■□□□□ 0.33
TIMP3-201ENST00000266085 USP17L3A6NCW0 530 aa17.13■□□□□ 0.33
TIMP3-201ENST00000266085 USP17L4A6NCW7 530 aa17.13■□□□□ 0.33
TIMP3-201ENST00000266085 OPA1O60313 960 aa17.13■□□□□ 0.33
TIMP3-201ENST00000266085 TXNRD1Q16881 649 aa17.13■□□□□ 0.33
TIMP3-201ENST00000266085 KRBA2Q6ZNG9 492 aa17.13■□□□□ 0.33
TIMP3-201ENST00000266085 USP17L1Q7RTZ2 530 aa17.13■□□□□ 0.33
TIMP3-201ENST00000266085 DHX36Q9H2U1 1008 aaKnown RBP17.13■□□□□ 0.33
TIMP3-201ENST00000266085 JCADQ9P266 1359 aa17.13■□□□□ 0.33
TIMP3-201ENST00000266085 STX10O60499 249 aa17.13■□□□□ 0.33
TIMP3-201ENST00000266085 LIFRP42702 1097 aa17.13■□□□□ 0.33
TIMP3-201ENST00000266085 NDUFA8P51970 172 aa17.13■□□□□ 0.33
TIMP3-201ENST00000266085 ARHGEF16Q5VV41 709 aa17.13■□□□□ 0.33
TIMP3-201ENST00000266085 GPBP1Q86WP2 473 aa17.13■□□□□ 0.33
TIMP3-201ENST00000266085 TRIML1Q8N9V2 468 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms