RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 SV2BQ7L1I2 683 aa16.71■□□□□ 0.27
CASC3-201ENST00000264645 TRMT1LQ7Z2T5 733 aaKnown RBP16.71■□□□□ 0.27
CASC3-201ENST00000264645 PEX26Q7Z412 305 aa16.71■□□□□ 0.27
CASC3-201ENST00000264645 ANKRD42Q8N9B4 389 aa16.71■□□□□ 0.27
CASC3-201ENST00000264645 TMOD3Q9NYL9 352 aa16.71■□□□□ 0.27
CASC3-201ENST00000264645 PCDHB6Q9Y5E3 794 aa16.71■□□□□ 0.27
CASC3-201ENST00000264645 SAMD9LQ8IVG5 1584 aa16.71■□□□□ 0.27
CASC3-201ENST00000264645 MXRA7P84157 204 aa16.71■□□□□ 0.27
CASC3-201ENST00000264645 CNNM4Q6P4Q7 775 aa16.71■□□□□ 0.27
CASC3-201ENST00000264645 ZNF654Q8IZM8 581 aa16.71■□□□□ 0.27
CASC3-201ENST00000264645 MOCS3O95396 460 aa16.71■□□□□ 0.26
CASC3-201ENST00000264645 RPN1P04843 607 aaKnown RBP16.71■□□□□ 0.26
CASC3-201ENST00000264645 TSNAXIP1Q2TAA8 658 aa16.71■□□□□ 0.26
CASC3-201ENST00000264645 ALS2CLQ60I27 953 aa16.71■□□□□ 0.26
CASC3-201ENST00000264645 PNKPQ96T60 521 aa16.71■□□□□ 0.26
CASC3-201ENST00000264645 PRAMEF22A3QJZ6 481 aa16.7■□□□□ 0.26
CASC3-201ENST00000264645 CTNND1O60716 968 aaKnown RBP16.7■□□□□ 0.26
CASC3-201ENST00000264645 CEBPAP49715 358 aaPredicted RBP16.7■□□□□ 0.26
CASC3-201ENST00000264645 CHRNA2Q15822 529 aa16.7■□□□□ 0.26
CASC3-201ENST00000264645 CCDC197Q8NCU1 140 aa16.7■□□□□ 0.26
CASC3-201ENST00000264645 IP6K1Q92551 441 aa16.7■□□□□ 0.26
CASC3-201ENST00000264645 OSBP2Q969R2 916 aa16.7■□□□□ 0.26
CASC3-201ENST00000264645 ZNF496Q96IT1 587 aaPredicted RBP16.7■□□□□ 0.26
CASC3-201ENST00000264645 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.7■□□□□ 0.26
CASC3-201ENST00000264645 GTPBP6O43824 516 aaPredicted RBP16.7■□□□□ 0.26
CASC3-201ENST00000264645 GNAT2P19087 354 aa16.7■□□□□ 0.26
CASC3-201ENST00000264645 ALDH3A1P30838 453 aa16.7■□□□□ 0.26
CASC3-201ENST00000264645 HNRNPH1P31943 449 aaKnown RBP16.7■□□□□ 0.26
CASC3-201ENST00000264645 GBP1P32455 592 aa16.7■□□□□ 0.26
CASC3-201ENST00000264645 BEND6Q5SZJ8 279 aaPredicted RBP16.7■□□□□ 0.26
CASC3-201ENST00000264645 ADAT2Q7Z6V5 191 aaKnown RBP16.7■□□□□ 0.26
CASC3-201ENST00000264645 TC2NQ8N9U0 490 aa16.7■□□□□ 0.26
CASC3-201ENST00000264645 ABHD10Q9NUJ1 306 aa16.7■□□□□ 0.26
CASC3-201ENST00000264645 KAT6BQ8WYB5 2073 aa16.7■□□□□ 0.26
CASC3-201ENST00000264645 KRIT1O00522 736 aa16.7■□□□□ 0.26
CASC3-201ENST00000264645 AKNAD1Q5T1N1 836 aa16.7■□□□□ 0.26
CASC3-201ENST00000264645 SHC4Q6S5L8 630 aa16.7■□□□□ 0.26
CASC3-201ENST00000264645 LRRC31Q6UY01 552 aa16.7■□□□□ 0.26
CASC3-201ENST00000264645 SFMBT2Q5VUG0 894 aa16.69■□□□□ 0.26
CASC3-201ENST00000264645 RESP18Q5W5W9 173 aa16.69■□□□□ 0.26
CASC3-201ENST00000264645 DENND2CQ68D51 928 aa16.69■□□□□ 0.26
CASC3-201ENST00000264645 EMBQ6PCB8 327 aa16.69■□□□□ 0.26
CASC3-201ENST00000264645 KSR1Q8IVT5 923 aa16.69■□□□□ 0.26
CASC3-201ENST00000264645 FANCBQ8NB91 859 aa16.69■□□□□ 0.26
CASC3-201ENST00000264645 ENGASEQ8NFI3 743 aa16.69■□□□□ 0.26
CASC3-201ENST00000264645 PLBD2Q8NHP8 589 aa16.69■□□□□ 0.26
CASC3-201ENST00000264645 TBC1D5Q92609 795 aa16.69■□□□□ 0.26
CASC3-201ENST00000264645 ARHGEF2Q92974 986 aaKnown RBP16.69■□□□□ 0.26
CASC3-201ENST00000264645 MAGEB6P1A0A0J9YX57 407 aa16.69■□□□□ 0.26
CASC3-201ENST00000264645 CHGBP05060 677 aa16.69■□□□□ 0.26
CASC3-201ENST00000264645 IRAK1P51617 712 aa16.69■□□□□ 0.26
CASC3-201ENST00000264645 ASIC2Q16515 512 aa16.69■□□□□ 0.26
CASC3-201ENST00000264645 FAM133BQ5BKY9 247 aaKnown RBP16.69■□□□□ 0.26
CASC3-201ENST00000264645 FOXR1Q6PIV2 292 aa16.69■□□□□ 0.26
CASC3-201ENST00000264645 RAD9BQ6WBX8 426 aa16.69■□□□□ 0.26
CASC3-201ENST00000264645 RBM43Q6ZSC3 357 aaKnown RBP16.69■□□□□ 0.26
CASC3-201ENST00000264645 PACS2Q86VP3 889 aa16.69■□□□□ 0.26
CASC3-201ENST00000264645 TEX2Q8IWB9 1127 aa16.69■□□□□ 0.26
CASC3-201ENST00000264645 TEX11Q8IYF3 940 aa16.69■□□□□ 0.26
CASC3-201ENST00000264645 ACTR5Q9H9F9 607 aaPredicted RBP16.69■□□□□ 0.26
CASC3-201ENST00000264645 ZNF287Q9HBT7 754 aa16.69■□□□□ 0.26
CASC3-201ENST00000264645 CD2APQ9Y5K6 639 aa16.69■□□□□ 0.26
CASC3-201ENST00000264645 ESYT3A0FGR9 886 aa16.69■□□□□ 0.26
CASC3-201ENST00000264645 M0R2C6 588 aa16.69■□□□□ 0.26
CASC3-201ENST00000264645 PRPHP41219 470 aa16.69■□□□□ 0.26
CASC3-201ENST00000264645 CETN1Q12798 172 aa16.69■□□□□ 0.26
CASC3-201ENST00000264645 NAA35Q5VZE5 725 aa16.69■□□□□ 0.26
CASC3-201ENST00000264645 TBC1D1Q86TI0 1168 aaPredicted RBP16.69■□□□□ 0.26
CASC3-201ENST00000264645 FNBP4Q8N3X1 1017 aaPredicted RBP16.69■□□□□ 0.26
CASC3-201ENST00000264645 SH2D3CQ8N5H7 860 aa16.69■□□□□ 0.26
CASC3-201ENST00000264645 KIF1CO43896 1103 aaKnown RBP16.68■□□□□ 0.26
CASC3-201ENST00000264645 PRR29P0C7W0 189 aa16.68■□□□□ 0.26
CASC3-201ENST00000264645 STMN2Q93045 179 aa16.68■□□□□ 0.26
CASC3-201ENST00000264645 PRM3Q9NNZ6 103 aa16.68■□□□□ 0.26
CASC3-201ENST00000264645 KLC4Q9NSK0 619 aa16.68■□□□□ 0.26
CASC3-201ENST00000264645 NOVA2Q9UNW9 492 aaKnown RBP16.68■□□□□ 0.26
CASC3-201ENST00000264645 ADCY10Q96PN6 1610 aa16.68■□□□□ 0.26
CASC3-201ENST00000264645 RNF10Q8N5U6 811 aaKnown RBP16.68■□□□□ 0.26
CASC3-201ENST00000264645 PLVAPQ9BX97 442 aa16.68■□□□□ 0.26
CASC3-201ENST00000264645 NHEJ1Q9H9Q4 299 aaPredicted RBP16.68■□□□□ 0.26
CASC3-201ENST00000264645 SMIM24O75264 130 aa16.68■□□□□ 0.26
CASC3-201ENST00000264645 PPP1R2P41236 205 aa16.68■□□□□ 0.26
CASC3-201ENST00000264645 TXKP42681 527 aa16.68■□□□□ 0.26
CASC3-201ENST00000264645 GNAQP50148 359 aa16.68■□□□□ 0.26
CASC3-201ENST00000264645 GUCY1A3Q02108 690 aa16.68■□□□□ 0.26
CASC3-201ENST00000264645 MMS19Q96T76 1030 aa16.68■□□□□ 0.26
CASC3-201ENST00000264645 LRRC7Q96NW7 1537 aa16.68■□□□□ 0.26
CASC3-201ENST00000264645 ATP1A1P05023 1023 aaKnown RBP16.68■□□□□ 0.26
CASC3-201ENST00000264645 BIRC2Q13490 618 aa16.68■□□□□ 0.26
CASC3-201ENST00000264645 STOX1Q6ZVD7 989 aa16.68■□□□□ 0.26
CASC3-201ENST00000264645 MRRFQ96E11 262 aaKnown RBP16.68■□□□□ 0.26
CASC3-201ENST00000264645 L1RE1Q9UN81 338 aa16.68■□□□□ 0.26
CASC3-201ENST00000264645 MEFVO15553 781 aaPredicted RBP16.67■□□□□ 0.26
CASC3-201ENST00000264645 TAOK1Q7L7X3 1001 aa16.67■□□□□ 0.26
CASC3-201ENST00000264645 METTL16Q86W50 562 aaKnown RBP16.67■□□□□ 0.26
CASC3-201ENST00000264645 CRNKL1Q9BZJ0 848 aaKnown RBP16.67■□□□□ 0.26
CASC3-201ENST00000264645 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.67■□□□□ 0.26
CASC3-201ENST00000264645 PNPLA6Q8IY17 1366 aa16.67■□□□□ 0.26
CASC3-201ENST00000264645 ATP7AQ04656 1500 aa16.67■□□□□ 0.26
CASC3-201ENST00000264645 KIF28PB7ZC32 967 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms