RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 ARHGAP4P98171 946 aa16.6■□□□□ 0.25
NID1-201ENST00000264187 FAM47CQ5HY64 1035 aa16.6■□□□□ 0.25
NID1-201ENST00000264187 MAGED2Q9UNF1 606 aaPredicted RBP16.6■□□□□ 0.25
NID1-201ENST00000264187 ZBED4O75132 1171 aa16.6■□□□□ 0.25
NID1-201ENST00000264187 GABPB1Q06547 395 aaPredicted RBP16.6■□□□□ 0.25
NID1-201ENST00000264187 MAP3K21Q5TCX8 1036 aa16.6■□□□□ 0.25
NID1-201ENST00000264187 MYLK4Q86YV6 388 aaPredicted RBP16.6■□□□□ 0.25
NID1-201ENST00000264187 PARP2Q9UGN5 583 aa16.6■□□□□ 0.25
NID1-201ENST00000264187 RPSAP08865 295 aaKnown RBP16.6■□□□□ 0.25
NID1-201ENST00000264187 KRT25Q7Z3Z0 450 aa16.6■□□□□ 0.25
NID1-201ENST00000264187 SLC12A1Q13621 1099 aa16.6■□□□□ 0.25
NID1-201ENST00000264187 RCN2Q14257 317 aa16.6■□□□□ 0.25
NID1-201ENST00000264187 TRAPPC3LQ5T215 181 aa16.6■□□□□ 0.25
NID1-201ENST00000264187 STAM2O75886 525 aa16.6■□□□□ 0.25
NID1-201ENST00000264187 PHBP35232 272 aa16.59■□□□□ 0.25
NID1-201ENST00000264187 HAUS2Q9NVX0 235 aa16.59■□□□□ 0.25
NID1-201ENST00000264187 SCAF11Q99590 1463 aaKnown RBP16.59■□□□□ 0.25
NID1-201ENST00000264187 LPXNO60711 386 aa16.59■□□□□ 0.25
NID1-201ENST00000264187 STAT1P42224 750 aa16.59■□□□□ 0.25
NID1-201ENST00000264187 PUM3Q15397 648 aaKnown RBP16.59■□□□□ 0.25
NID1-201ENST00000264187 MUM1L1Q5H9M0 696 aa16.59■□□□□ 0.25
NID1-201ENST00000264187 DEPTORQ8TB45 409 aa16.59■□□□□ 0.25
NID1-201ENST00000264187 TGFBRAP1Q8WUH2 860 aa16.59■□□□□ 0.25
NID1-201ENST00000264187 MAIP1Q8WWC4 291 aa16.59■□□□□ 0.25
NID1-201ENST00000264187 SDCCAG3Q96C92 435 aa16.59■□□□□ 0.25
NID1-201ENST00000264187 TRIM56Q9BRZ2 755 aaKnown RBP16.59■□□□□ 0.25
NID1-201ENST00000264187 HP1BP3Q5SSJ5 553 aaPredicted RBP16.59■□□□□ 0.25
NID1-201ENST00000264187 ZBTB40Q9NUA8 1239 aa16.59■□□□□ 0.25
NID1-201ENST00000264187 PLCH2O75038 1416 aa16.59■□□□□ 0.25
NID1-201ENST00000264187 UBAP1LF5GYI3 381 aa16.59■□□□□ 0.25
NID1-201ENST00000264187 EYA2O00167 538 aa16.59■□□□□ 0.25
NID1-201ENST00000264187 KCTD16Q68DU8 428 aa16.59■□□□□ 0.25
NID1-201ENST00000264187 BCAS4Q8TDM0 211 aa16.59■□□□□ 0.25
NID1-201ENST00000264187 TESPA1A2RU30 521 aaPredicted RBP16.58■□□□□ 0.25
NID1-201ENST00000264187 ZBTB24O43167 697 aaPredicted RBP16.58■□□□□ 0.25
NID1-201ENST00000264187 IFNAR2P48551 515 aa16.58■□□□□ 0.25
NID1-201ENST00000264187 SUDS3Q9H7L9 328 aaPredicted RBP16.58■□□□□ 0.25
NID1-201ENST00000264187 HOMER3Q9NSC5 361 aa16.58■□□□□ 0.25
NID1-201ENST00000264187 PPP1R9AQ9ULJ8 1098 aa16.58■□□□□ 0.25
NID1-201ENST00000264187 TRPC6Q9Y210 931 aa16.58■□□□□ 0.25
NID1-201ENST00000264187 PTPN22Q9Y2R2 807 aa16.58■□□□□ 0.25
NID1-201ENST00000264187 CCDC84Q86UT8 332 aaPredicted RBP16.58■□□□□ 0.25
NID1-201ENST00000264187 DDX17Q92841 729 aaKnown RBP16.58■□□□□ 0.24
NID1-201ENST00000264187 LRGUKQ96M69 825 aa16.58■□□□□ 0.24
NID1-201ENST00000264187 POC1B-GALNT4F8VUJ3 575 aa16.58■□□□□ 0.24
NID1-201ENST00000264187 GPBP1Q86WP2 473 aa16.58■□□□□ 0.24
NID1-201ENST00000264187 BCL2L12Q9HB09 334 aa16.58■□□□□ 0.24
NID1-201ENST00000264187 GGA1Q9UJY5 639 aa16.58■□□□□ 0.24
NID1-201ENST00000264187 XRCC5P13010 732 aaKnown RBP16.58■□□□□ 0.24
NID1-201ENST00000264187 ECE1P42892 770 aa16.58■□□□□ 0.24
NID1-201ENST00000264187 EEF2KMTQ96G04 330 aa16.58■□□□□ 0.24
NID1-201ENST00000264187 CAPS2Q9BXY5 557 aa16.58■□□□□ 0.24
NID1-201ENST00000264187 C14orf93Q9H972 538 aaKnown RBP16.58■□□□□ 0.24
NID1-201ENST00000264187 KCNJ18B7U540 433 aa16.57■□□□□ 0.24
NID1-201ENST00000264187 DLATP10515 647 aaKnown RBP16.57■□□□□ 0.24
NID1-201ENST00000264187 IRX4P78413 519 aa16.57■□□□□ 0.24
NID1-201ENST00000264187 KCNJ12Q14500 433 aa16.57■□□□□ 0.24
NID1-201ENST00000264187 NBPF14Q5TI25 921 aa16.57■□□□□ 0.24
NID1-201ENST00000264187 APPBP2Q92624 585 aa16.57■□□□□ 0.24
NID1-201ENST00000264187 CCDC68Q9H2F9 335 aa16.57■□□□□ 0.24
NID1-201ENST00000264187 COBLO75128 1261 aa16.57■□□□□ 0.24
NID1-201ENST00000264187 CSPG5O95196 566 aa16.57■□□□□ 0.24
NID1-201ENST00000264187 APOEP02649 317 aa16.57■□□□□ 0.24
NID1-201ENST00000264187 P4HA1P13674 534 aa16.57■□□□□ 0.24
NID1-201ENST00000264187 ZNF827Q17R98 1081 aa16.57■□□□□ 0.24
NID1-201ENST00000264187 TECP42680 631 aa16.57■□□□□ 0.24
NID1-201ENST00000264187 PHACTR3Q96KR7 559 aa16.57■□□□□ 0.24
NID1-201ENST00000264187 HAUS8Q9BT25 410 aa16.57■□□□□ 0.24
NID1-201ENST00000264187 SPDYE2BA6NHP3 402 aa16.57■□□□□ 0.24
NID1-201ENST00000264187 GAS7O60861 476 aa16.57■□□□□ 0.24
NID1-201ENST00000264187 SLC4A1P02730 911 aa16.57■□□□□ 0.24
NID1-201ENST00000264187 SPDYE6P0CI01 402 aa16.57■□□□□ 0.24
NID1-201ENST00000264187 TTBK2Q6IQ55 1244 aa16.57■□□□□ 0.24
NID1-201ENST00000264187 ANKRD13CQ8N6S4 541 aa16.57■□□□□ 0.24
NID1-201ENST00000264187 LLPHQ9BRT6 129 aaKnown RBP16.57■□□□□ 0.24
NID1-201ENST00000264187 FIS1Q9Y3D6 152 aa16.57■□□□□ 0.24
NID1-201ENST00000264187 KDM2BQ8NHM5 1336 aa16.57■□□□□ 0.24
NID1-201ENST00000264187 PFDN1O60925 122 aa16.57■□□□□ 0.24
NID1-201ENST00000264187 CDR2Q01850 454 aa16.57■□□□□ 0.24
NID1-201ENST00000264187 YWHAGP61981 247 aaKnown RBP eCLIP16.56■□□□□ 0.24
NID1-201ENST00000264187 TFAP4Q01664 338 aa16.56■□□□□ 0.24
NID1-201ENST00000264187 PSPC1Q8WXF1 523 aaKnown RBP16.56■□□□□ 0.24
NID1-201ENST00000264187 PAGR1Q9BTK6 254 aa16.56■□□□□ 0.24
NID1-201ENST00000264187 Q9H521 79 aa16.56■□□□□ 0.24
NID1-201ENST00000264187 GPC4O75487 556 aa16.56■□□□□ 0.24
NID1-201ENST00000264187 CNGA1P29973 690 aa16.56■□□□□ 0.24
NID1-201ENST00000264187 ANLNQ9NQW6 1124 aa16.56■□□□□ 0.24
NID1-201ENST00000264187 POLR2FP61218 127 aaKnown RBP16.56■□□□□ 0.24
NID1-201ENST00000264187 NLRX1Q86UT6 975 aa16.56■□□□□ 0.24
NID1-201ENST00000264187 TRIM4Q9C037 500 aa16.56■□□□□ 0.24
NID1-201ENST00000264187 ABCF3Q9NUQ8 709 aa16.56■□□□□ 0.24
NID1-201ENST00000264187 ZNF148Q9UQR1 794 aa16.56■□□□□ 0.24
NID1-201ENST00000264187 NUB1Q9Y5A7 615 aa16.56■□□□□ 0.24
NID1-201ENST00000264187 HECW1Q76N89 1606 aa16.56■□□□□ 0.24
NID1-201ENST00000264187 PPIP5K1Q6PFW1 1433 aa16.56■□□□□ 0.24
NID1-201ENST00000264187 SMCO2A6NFE2 343 aa16.55■□□□□ 0.24
NID1-201ENST00000264187 ZBBXA8MT70 800 aa16.55■□□□□ 0.24
NID1-201ENST00000264187 REXO1Q8N1G1 1221 aaKnown RBP16.55■□□□□ 0.24
NID1-201ENST00000264187 CCDC127Q96BQ5 260 aa16.55■□□□□ 0.24
NID1-201ENST00000264187 FAN1Q9Y2M0 1017 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms