RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 AACSQ86V21 672 aa15.91■□□□□ 0.14
SGCA-201ENST00000262018 FOXP4Q8IVH2 680 aaPredicted RBP15.91■□□□□ 0.14
SGCA-201ENST00000262018 EAF2Q96CJ1 260 aaPredicted RBP15.91■□□□□ 0.14
SGCA-201ENST00000262018 GPATCH3Q96I76 525 aa15.91■□□□□ 0.14
SGCA-201ENST00000262018 RAI14Q9P0K7 980 aa15.91■□□□□ 0.14
SGCA-201ENST00000262018 CXXC1Q9P0U4 656 aaPredicted RBP15.91■□□□□ 0.14
SGCA-201ENST00000262018 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.91■□□□□ 0.14
SGCA-201ENST00000262018 ERC2O15083 957 aa15.9■□□□□ 0.14
SGCA-201ENST00000262018 TNNI3KQ59H18 835 aa15.9■□□□□ 0.14
SGCA-201ENST00000262018 CASC1Q6TDU7 716 aa15.9■□□□□ 0.14
SGCA-201ENST00000262018 ALYREFQ86V81 257 aaKnown RBP15.9■□□□□ 0.14
SGCA-201ENST00000262018 SLC44A5Q8NCS7 719 aa15.9■□□□□ 0.14
SGCA-201ENST00000262018 C12orf42Q96LP6 360 aa15.9■□□□□ 0.14
SGCA-201ENST00000262018 NOL10Q9BSC4 688 aaKnown RBP15.9■□□□□ 0.14
SGCA-201ENST00000262018 C22orf23Q9BZE7 217 aa15.9■□□□□ 0.14
SGCA-201ENST00000262018 ECHDC1Q9NTX5 307 aa15.9■□□□□ 0.14
SGCA-201ENST00000262018 FPGT-TNNI3KV9GXZ4 949 aa15.9■□□□□ 0.14
SGCA-201ENST00000262018 TFF2Q03403 129 aa15.89■□□□□ 0.13
SGCA-201ENST00000262018 TMEM31Q5JXX7 168 aa15.89■□□□□ 0.13
SGCA-201ENST00000262018 MAPKAPK5Q8IW41 473 aa15.89■□□□□ 0.13
SGCA-201ENST00000262018 MICALL1Q8N3F8 863 aa15.89■□□□□ 0.13
SGCA-201ENST00000262018 NEUROD6Q96NK8 337 aa15.89■□□□□ 0.13
SGCA-201ENST00000262018 XPNPEP3Q9NQH7 507 aa15.89■□□□□ 0.13
SGCA-201ENST00000262018 SIPA1L1O43166 1804 aa15.89■□□□□ 0.13
SGCA-201ENST00000262018 PLXNA1Q9UIW2 1896 aa15.89■□□□□ 0.13
SGCA-201ENST00000262018 DCDC2CA8MYV0 355 aa15.88■□□□□ 0.13
SGCA-201ENST00000262018 COBLO75128 1261 aa15.88■□□□□ 0.13
SGCA-201ENST00000262018 GH2P01242 217 aa15.88■□□□□ 0.13
SGCA-201ENST00000262018 RBM25P49756 843 aaKnown RBP15.88■□□□□ 0.13
SGCA-201ENST00000262018 FAAP100Q0VG06 881 aa15.88■□□□□ 0.13
SGCA-201ENST00000262018 LBX2Q6XYB7 198 aa15.88■□□□□ 0.13
SGCA-201ENST00000262018 TGFBRAP1Q8WUH2 860 aa15.88■□□□□ 0.13
SGCA-201ENST00000262018 HMG20BQ9P0W2 317 aa15.88■□□□□ 0.13
SGCA-201ENST00000262018 MSRAQ9UJ68 235 aa15.88■□□□□ 0.13
SGCA-201ENST00000262018 PALD1Q9ULE6 856 aa15.88■□□□□ 0.13
SGCA-201ENST00000262018 A0A1W2PQ45 241 aaPredicted RBP15.87■□□□□ 0.13
SGCA-201ENST00000262018 A0A1W2PQY0 241 aa15.87■□□□□ 0.13
SGCA-201ENST00000262018 SPDYE16A6NNV3 312 aaPredicted RBP15.87■□□□□ 0.13
SGCA-201ENST00000262018 TRIM6-TRIM34B2RNG4 842 aa15.87■□□□□ 0.13
SGCA-201ENST00000262018 STRNO43815 780 aa15.87■□□□□ 0.13
SGCA-201ENST00000262018 PGK1P00558 417 aa15.87■□□□□ 0.13
SGCA-201ENST00000262018 TIMP1P01033 207 aa15.87■□□□□ 0.13
SGCA-201ENST00000262018 RARBP10826 455 aa15.87■□□□□ 0.13
SGCA-201ENST00000262018 VCAM1P19320 739 aa15.87■□□□□ 0.13
SGCA-201ENST00000262018 KCNQ1P51787 676 aa15.87■□□□□ 0.13
SGCA-201ENST00000262018 AAK1Q2M2I8 961 aa15.87■□□□□ 0.13
SGCA-201ENST00000262018 TMEM240Q5SV17 173 aa15.87■□□□□ 0.13
SGCA-201ENST00000262018 CCDC174Q6PII3 467 aa15.87■□□□□ 0.13
SGCA-201ENST00000262018 PI16Q6UXB8 463 aa15.87■□□□□ 0.13
SGCA-201ENST00000262018 RNF180Q86T96 592 aa15.87■□□□□ 0.13
SGCA-201ENST00000262018 METTL16Q86W50 562 aaKnown RBP15.87■□□□□ 0.13
SGCA-201ENST00000262018 XAGE2Q96GT9 111 aa15.87■□□□□ 0.13
SGCA-201ENST00000262018 MOV10L1Q9BXT6 1211 aaKnown RBP15.87■□□□□ 0.13
SGCA-201ENST00000262018 CCDC8Q9H0W5 538 aaPredicted RBP15.87■□□□□ 0.13
SGCA-201ENST00000262018 SLC5A4Q9NY91 659 aa15.87■□□□□ 0.13
SGCA-201ENST00000262018 USP14P54578 494 aa15.86■□□□□ 0.13
SGCA-201ENST00000262018 PPIGQ13427 754 aaKnown RBP eCLIP15.86■□□□□ 0.13
SGCA-201ENST00000262018 RAB30Q15771 203 aa15.86■□□□□ 0.13
SGCA-201ENST00000262018 GORABQ5T7V8 394 aa15.86■□□□□ 0.13
SGCA-201ENST00000262018 C16orf59Q7L2K0 433 aa15.86■□□□□ 0.13
SGCA-201ENST00000262018 RILPL2Q969X0 211 aa15.86■□□□□ 0.13
SGCA-201ENST00000262018 NKX2-4Q9H2Z4 354 aa15.86■□□□□ 0.13
SGCA-201ENST00000262018 AATFQ9NY61 560 aaKnown RBP eCLIP15.86■□□□□ 0.13
SGCA-201ENST00000262018 SAP30BPQ9UHR5 308 aaKnown RBP15.86■□□□□ 0.13
SGCA-201ENST00000262018 FLT1P17948 1338 aa15.86■□□□□ 0.13
SGCA-201ENST00000262018 BAG3O95817 575 aa15.85■□□□□ 0.13
SGCA-201ENST00000262018 CHMLP26374 656 aa15.85■□□□□ 0.13
SGCA-201ENST00000262018 SKIV2LQ15477 1246 aaKnown RBP15.85■□□□□ 0.13
SGCA-201ENST00000262018 RASIP1Q5U651 963 aa15.85■□□□□ 0.13
SGCA-201ENST00000262018 MFSD5Q6N075 450 aa15.85■□□□□ 0.13
SGCA-201ENST00000262018 ANKRD33Q7Z3H0 272 aa15.85■□□□□ 0.13
SGCA-201ENST00000262018 SPATA5Q8NB90 893 aa15.85■□□□□ 0.13
SGCA-201ENST00000262018 TOX2Q96NM4 488 aa15.85■□□□□ 0.13
SGCA-201ENST00000262018 RPAP3Q9H6T3 665 aaPredicted RBP15.85■□□□□ 0.13
SGCA-201ENST00000262018 TLR7Q9NYK1 1049 aaKnown RBP15.85■□□□□ 0.13
SGCA-201ENST00000262018 LRP2BPQ9P2M1 347 aa15.85■□□□□ 0.13
SGCA-201ENST00000262018 MUC6Q6W4X9 2439 aa15.85■□□□□ 0.13
SGCA-201ENST00000262018 HLA-DOAP06340 250 aa15.85■□□□□ 0.13
SGCA-201ENST00000262018 ACRP10323 421 aa15.85■□□□□ 0.13
SGCA-201ENST00000262018 ERCC3P19447 782 aa15.85■□□□□ 0.13
SGCA-201ENST00000262018 RAB3GAP1Q15042 981 aa15.85■□□□□ 0.13
SGCA-201ENST00000262018 ZNF365Q70YC5 407 aa15.85■□□□□ 0.13
SGCA-201ENST00000262018 ACER1Q8TDN7 264 aa15.85■□□□□ 0.13
SGCA-201ENST00000262018 DBNDD2Q9BQY9 259 aa15.85■□□□□ 0.13
SGCA-201ENST00000262018 KIAA1683Q9H0B3 1180 aa15.85■□□□□ 0.13
SGCA-201ENST00000262018 SLC28A3Q9HAS3 691 aa15.85■□□□□ 0.13
SGCA-201ENST00000262018 DBNLQ9UJU6 430 aaKnown RBP15.85■□□□□ 0.13
SGCA-201ENST00000262018 CSF2RAP15509 400 aa15.84■□□□□ 0.13
SGCA-201ENST00000262018 PLCG2P16885 1265 aa15.84■□□□□ 0.13
SGCA-201ENST00000262018 CCDC158Q5M9N0 1113 aa15.84■□□□□ 0.13
SGCA-201ENST00000262018 MAML3Q96JK9 1138 aa15.84■□□□□ 0.13
SGCA-201ENST00000262018 ESYT1Q9BSJ8 1104 aa15.84■□□□□ 0.13
SGCA-201ENST00000262018 SPATC1LQ9H0A9 340 aa15.84■□□□□ 0.13
SGCA-201ENST00000262018 STARD7Q9NQZ5 370 aa15.84■□□□□ 0.13
SGCA-201ENST00000262018 TBX21Q9UL17 535 aa15.84■□□□□ 0.13
SGCA-201ENST00000262018 ZNF236Q9UL36 1845 aa15.83■□□□□ 0.13
SGCA-201ENST00000262018 CHD9Q3L8U1 2897 aa15.83■□□□□ 0.12
SGCA-201ENST00000262018 FAM86C2PA6NEL3 165 aa15.83■□□□□ 0.12
SGCA-201ENST00000262018 REC8O95072 547 aa15.83■□□□□ 0.12
SGCA-201ENST00000262018 UQCRFS1P1P0C7P4 283 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms