RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 PDE8BO95263 885 aa15.06■□□□□ 0
PDGFRB-201ENST00000261799 ADCY5O95622 1261 aa15.06■□□□□ 0
PDGFRB-201ENST00000261799 ANO1Q5XXA6 986 aa15.06■□□□□ 0
PDGFRB-201ENST00000261799 DYMQ7RTS9 669 aa15.06■□□□□ 0
PDGFRB-201ENST00000261799 TBC1D31Q96DN5 1066 aa15.06■□□□□ 0
PDGFRB-201ENST00000261799 MAGI3Q5TCQ9 1506 aa15.06■□□□□ 0
PDGFRB-201ENST00000261799 AATKQ6ZMQ8 1374 aa15.06■□□□□ 0
PDGFRB-201ENST00000261799 ZNF654Q8IZM8 581 aa15.06■□□□□ 0
PDGFRB-201ENST00000261799 FAM227BQ96M60 508 aa15.06■□□□□ 0
PDGFRB-201ENST00000261799 MIS12Q9H081 205 aa15.06■□□□□ 0
PDGFRB-201ENST00000261799 DACT1Q9NYF0 836 aa15.06■□□□□ 0
PDGFRB-201ENST00000261799 LUC7L2Q9Y383 392 aaKnown RBP15.06■□□□□ 0
PDGFRB-201ENST00000261799 ERBB3P21860 1342 aa15.06■□□□□ 0
PDGFRB-201ENST00000261799 CALRP27797 417 aaKnown RBP15.06■□□□□ 0
PDGFRB-201ENST00000261799 STAT2P52630 851 aa15.06■□□□□ 0
PDGFRB-201ENST00000261799 MAP7D1Q3KQU3 841 aa15.06■□□□□ 0
PDGFRB-201ENST00000261799 NLRP7Q8WX94 980 aa15.06■□□□□ 0
PDGFRB-201ENST00000261799 NAP1L3Q99457 506 aaPredicted RBP15.06■□□□□ 0
PDGFRB-201ENST00000261799 CCDC94Q9BW85 323 aaPredicted RBP15.06■□□□□ 0
PDGFRB-201ENST00000261799 CFAP65Q6ZU64 1925 aaKnown RBP15.06■□□□□ 0
PDGFRB-201ENST00000261799 KLRF2D3W0D1 207 aa15.06■□□□□ 0
PDGFRB-201ENST00000261799 ECE2O60344 883 aa15.06■□□□□ 0
PDGFRB-201ENST00000261799 SKIV2LQ15477 1246 aaKnown RBP15.06■□□□□ 0
PDGFRB-201ENST00000261799 SPICE1Q8N0Z3 855 aa15.06■□□□□ 0
PDGFRB-201ENST00000261799 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.06■□□□□ 0
PDGFRB-201ENST00000261799 HEG1Q9ULI3 1381 aa15.06■□□□□ 0
PDGFRB-201ENST00000261799 LRRIQ4A6NIV6 560 aa15.06■□□□□ 0
PDGFRB-201ENST00000261799 MIGA2Q7L4E1 593 aa15.06■□□□□ 0
PDGFRB-201ENST00000261799 ELMOD1Q8N336 334 aa15.06■□□□□ 0
PDGFRB-201ENST00000261799 MTRF1LQ9UGC7 380 aaKnown RBP15.06■□□□□ 0
PDGFRB-201ENST00000261799 TMEM191BP0C7N4 346 aa15.05■□□□□ 0
PDGFRB-201ENST00000261799 TXNRD1Q16881 649 aa15.05■□□□□ -0
PDGFRB-201ENST00000261799 UBL4BQ8N7F7 174 aa15.05■□□□□ -0
PDGFRB-201ENST00000261799 ZNF277Q9NRM2 450 aaPredicted RBP15.05■□□□□ -0
PDGFRB-201ENST00000261799 HESX1Q9UBX0 185 aa15.05■□□□□ -0
PDGFRB-201ENST00000261799 KIF1BO60333 1816 aa15.05■□□□□ -0
PDGFRB-201ENST00000261799 MED23Q9ULK4 1368 aa15.05■□□□□ -0
PDGFRB-201ENST00000261799 GNA14O95837 355 aa15.05■□□□□ -0
PDGFRB-201ENST00000261799 ALDH3A1P30838 453 aa15.05■□□□□ -0
PDGFRB-201ENST00000261799 GPBP1Q86WP2 473 aa15.05■□□□□ -0
PDGFRB-201ENST00000261799 NACC1Q96RE7 527 aa15.05■□□□□ -0
PDGFRB-201ENST00000261799 NSRP1Q9H0G5 558 aaKnown RBP15.05■□□□□ -0
PDGFRB-201ENST00000261799 M0R2C6 588 aa15.05■□□□□ -0
PDGFRB-201ENST00000261799 TRIM14Q14142 442 aa15.05■□□□□ -0
PDGFRB-201ENST00000261799 BLIDQ8IZY5 108 aa15.05■□□□□ -0
PDGFRB-201ENST00000261799 TTC37Q6PGP7 1564 aa15.04■□□□□ -0
PDGFRB-201ENST00000261799 ELF1P32519 619 aa15.04■□□□□ -0
PDGFRB-201ENST00000261799 CFAP157Q5JU67 520 aa15.04■□□□□ -0
PDGFRB-201ENST00000261799 RAET1EQ8TD07 263 aa15.04■□□□□ -0
PDGFRB-201ENST00000261799 KIF9Q9HAQ2 790 aa15.04■□□□□ -0
PDGFRB-201ENST00000261799 BMP3P12645 472 aa15.04■□□□□ -0
PDGFRB-201ENST00000261799 XPAP23025 273 aaPredicted RBP15.04■□□□□ -0
PDGFRB-201ENST00000261799 CALCOCO2Q13137 446 aa15.04■□□□□ -0
PDGFRB-201ENST00000261799 GEN1Q17RS7 908 aa15.04■□□□□ -0
PDGFRB-201ENST00000261799 LRRC24Q50LG9 513 aa15.04■□□□□ -0
PDGFRB-201ENST00000261799 NARFQ9UHQ1 456 aa15.04■□□□□ -0
PDGFRB-201ENST00000261799 TRIM35Q9UPQ4 493 aa15.04■□□□□ -0
PDGFRB-201ENST00000261799 N4BP1O75113 896 aaKnown RBP15.04■□□□□ -0
PDGFRB-201ENST00000261799 XRCC6P12956 609 aaKnown RBP eCLIP15.04■□□□□ -0
PDGFRB-201ENST00000261799 ZNF569Q5MCW4 686 aa15.04■□□□□ -0
PDGFRB-201ENST00000261799 SYDE2Q5VT97 1194 aa15.04■□□□□ -0
PDGFRB-201ENST00000261799 PDCL2Q8N4E4 241 aa15.04■□□□□ -0
PDGFRB-201ENST00000261799 HACL1Q9UJ83 578 aa15.04■□□□□ -0
PDGFRB-201ENST00000261799 E7EWF7 191 aa15.04■□□□□ -0
PDGFRB-201ENST00000261799 ABCD1P33897 745 aa15.04■□□□□ -0
PDGFRB-201ENST00000261799 SRGAP1Q7Z6B7 1085 aa15.04■□□□□ -0
PDGFRB-201ENST00000261799 GPR161Q8N6U8 529 aaKnown RBP15.04■□□□□ -0
PDGFRB-201ENST00000261799 CTAGE15A4D2H0 777 aa15.04■□□□□ -0
PDGFRB-201ENST00000261799 CTAGE8P0CG41 777 aa15.04■□□□□ -0
PDGFRB-201ENST00000261799 CUL4BQ13620 913 aa15.04■□□□□ -0
PDGFRB-201ENST00000261799 PDZD4Q76G19 769 aaPredicted RBP15.04■□□□□ -0
PDGFRB-201ENST00000261799 CTAGE6Q86UF2 777 aa15.04■□□□□ -0
PDGFRB-201ENST00000261799 CTAGE4Q8IX94 777 aa15.04■□□□□ -0
PDGFRB-201ENST00000261799 CSGALNACT2Q8N6G5 542 aa15.04■□□□□ -0
PDGFRB-201ENST00000261799 NDUFB9Q9Y6M9 179 aa15.04■□□□□ -0
PDGFRB-201ENST00000261799 MXRA7P84157 204 aa15.03■□□□□ -0
PDGFRB-201ENST00000261799 VPS54Q9P1Q0 977 aa15.03■□□□□ -0
PDGFRB-201ENST00000261799 KCNH3Q9ULD8 1083 aa15.03■□□□□ -0
PDGFRB-201ENST00000261799 ZBBXA8MT70 800 aa15.03■□□□□ -0
PDGFRB-201ENST00000261799 RAD51AP2Q09MP3 1159 aa15.03■□□□□ -0
PDGFRB-201ENST00000261799 PAK1Q13153 545 aa15.03■□□□□ -0
PDGFRB-201ENST00000261799 TRIM50Q86XT4 487 aa15.03■□□□□ -0
PDGFRB-201ENST00000261799 SMC1BQ8NDV3 1235 aa15.03■□□□□ -0
PDGFRB-201ENST00000261799 ZNF577Q9BSK1 485 aa15.03■□□□□ -0
PDGFRB-201ENST00000261799 BSDC1Q9NW68 430 aaPredicted RBP15.03■□□□□ -0
PDGFRB-201ENST00000261799 GOLGA8HP0CJ92 632 aa15.03■□□□□ -0
PDGFRB-201ENST00000261799 ANXA13P27216 316 aa15.03■□□□□ -0
PDGFRB-201ENST00000261799 NELFCDQ8IXH7 590 aa15.03■□□□□ -0
PDGFRB-201ENST00000261799 LBHD1Q9BQE6 289 aaPredicted RBP15.03■□□□□ -0
PDGFRB-201ENST00000261799 GIPC1O14908 333 aa15.03■□□□□ -0
PDGFRB-201ENST00000261799 SYT1P21579 422 aa15.03■□□□□ -0
PDGFRB-201ENST00000261799 TNNC1P63316 161 aa15.03■□□□□ -0
PDGFRB-201ENST00000261799 UBXN2AP68543 259 aa15.03■□□□□ -0
PDGFRB-201ENST00000261799 SEC31BQ9NQW1 1179 aa15.03■□□□□ -0
PDGFRB-201ENST00000261799 ANKFY1Q9P2R3 1169 aa15.03■□□□□ -0
PDGFRB-201ENST00000261799 PLEKHG2Q9H7P9 1386 aa15.03■□□□□ -0
PDGFRB-201ENST00000261799 CTAGE9A4FU28 777 aa15.02■□□□□ -0
PDGFRB-201ENST00000261799 GMNNO75496 209 aa15.02■□□□□ -0
PDGFRB-201ENST00000261799 POLR2BP30876 1174 aaKnown RBP15.02■□□□□ -0
PDGFRB-201ENST00000261799 AOC3Q16853 763 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms