RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 NOC4LQ9BVI4 516 aaKnown RBP15.54■□□□□ 0.08
CDH1-201ENST00000261769 MRPL44Q9H9J2 332 aaKnown RBP15.54■□□□□ 0.08
CDH1-201ENST00000261769 ZEB2O60315 1214 aa15.54■□□□□ 0.08
CDH1-201ENST00000261769 IFFO1Q0D2I5 559 aa15.54■□□□□ 0.08
CDH1-201ENST00000261769 RSPH3Q86UC2 560 aa15.54■□□□□ 0.08
CDH1-201ENST00000261769 CSGALNACT2Q8N6G5 542 aa15.54■□□□□ 0.08
CDH1-201ENST00000261769 RGS22Q8NE09 1264 aa15.54■□□□□ 0.08
CDH1-201ENST00000261769 RNF26Q9BY78 433 aaPredicted RBP15.54■□□□□ 0.08
CDH1-201ENST00000261769 PCDHB13Q9Y5F0 798 aa15.54■□□□□ 0.08
CDH1-201ENST00000261769 KIDINS220Q9ULH0 1771 aa15.54■□□□□ 0.08
CDH1-201ENST00000261769 NEXMIFQ5QGS0 1516 aa15.54■□□□□ 0.08
CDH1-201ENST00000261769 RAPGEF1Q13905 1077 aa15.54■□□□□ 0.08
CDH1-201ENST00000261769 HLTFQ14527 1009 aaKnown RBP eCLIP15.54■□□□□ 0.08
CDH1-201ENST00000261769 PKNOX2Q96KN3 472 aa15.54■□□□□ 0.08
CDH1-201ENST00000261769 OR52Z1P0C646 297 aa15.54■□□□□ 0.08
CDH1-201ENST00000261769 TBC1D8BQ0IIM8 1120 aa15.54■□□□□ 0.08
CDH1-201ENST00000261769 ME3Q16798 604 aa15.54■□□□□ 0.08
CDH1-201ENST00000261769 XKR9Q5GH70 373 aa15.54■□□□□ 0.08
CDH1-201ENST00000261769 LARSQ9P2J5 1176 aaKnown RBP15.54■□□□□ 0.08
CDH1-201ENST00000261769 GCNT3O95395 438 aa15.53■□□□□ 0.08
CDH1-201ENST00000261769 GNG11P61952 73 aa15.53■□□□□ 0.08
CDH1-201ENST00000261769 SNW1Q13573 536 aaKnown RBP15.53■□□□□ 0.08
CDH1-201ENST00000261769 INF2Q27J81 1249 aa15.53■□□□□ 0.08
CDH1-201ENST00000261769 CCDC91Q7Z6B0 441 aa15.53■□□□□ 0.08
CDH1-201ENST00000261769 SUGT1Q9Y2Z0 365 aa15.53■□□□□ 0.08
CDH1-201ENST00000261769 QRICH2Q9H0J4 1663 aa15.53■□□□□ 0.08
CDH1-201ENST00000261769 NBPF26B4DH59 902 aa15.53■□□□□ 0.08
CDH1-201ENST00000261769 KRT86O43790 486 aa15.53■□□□□ 0.08
CDH1-201ENST00000261769 NBPF10Q6P3W6 841 aaKnown RBP15.53■□□□□ 0.08
CDH1-201ENST00000261769 NBPF15Q8N660 670 aa15.53■□□□□ 0.08
CDH1-201ENST00000261769 TTC14Q96N46 770 aa15.53■□□□□ 0.08
CDH1-201ENST00000261769 IGSF3O75054 1194 aa15.53■□□□□ 0.08
CDH1-201ENST00000261769 KRT5P13647 590 aa15.53■□□□□ 0.08
CDH1-201ENST00000261769 DYMQ7RTS9 669 aa15.53■□□□□ 0.08
CDH1-201ENST00000261769 ATP6V0A1Q93050 837 aa15.53■□□□□ 0.08
CDH1-201ENST00000261769 PIH1D3Q9NQM4 214 aaKnown RBP15.53■□□□□ 0.08
CDH1-201ENST00000261769 DDX25Q9UHL0 483 aaKnown RBP15.53■□□□□ 0.08
CDH1-201ENST00000261769 DIP2AQ14689 1571 aa15.53■□□□□ 0.08
CDH1-201ENST00000261769 ZNRF3Q9ULT6 936 aa15.52■□□□□ 0.08
CDH1-201ENST00000261769 PTGS1P23219 599 aa15.52■□□□□ 0.08
CDH1-201ENST00000261769 SYDE2Q5VT97 1194 aa15.52■□□□□ 0.08
CDH1-201ENST00000261769 CMTR1Q8N1G2 835 aaKnown RBP15.52■□□□□ 0.08
CDH1-201ENST00000261769 LEO1Q8WVC0 666 aaPredicted RBP15.52■□□□□ 0.08
CDH1-201ENST00000261769 BRPF3Q9ULD4 1205 aa15.52■□□□□ 0.08
CDH1-201ENST00000261769 NRXN1Q9ULB1 1477 aa15.52■□□□□ 0.08
CDH1-201ENST00000261769 PRKAB2O43741 272 aa15.52■□□□□ 0.08
CDH1-201ENST00000261769 MYZAPP0CAP1 466 aa15.52■□□□□ 0.08
CDH1-201ENST00000261769 P4HA1P13674 534 aa15.52■□□□□ 0.08
CDH1-201ENST00000261769 CDK8P49336 464 aa15.52■□□□□ 0.08
CDH1-201ENST00000261769 CNGA4Q8IV77 575 aa15.52■□□□□ 0.08
CDH1-201ENST00000261769 OSBP2Q969R2 916 aa15.52■□□□□ 0.08
CDH1-201ENST00000261769 M0R2C6 588 aa15.52■□□□□ 0.07
CDH1-201ENST00000261769 SLC15A2Q16348 729 aa15.52■□□□□ 0.07
CDH1-201ENST00000261769 APOA5Q6Q788 366 aa15.52■□□□□ 0.07
CDH1-201ENST00000261769 GPKOWQ92917 476 aaPredicted RBP eCLIP15.52■□□□□ 0.07
CDH1-201ENST00000261769 CCDC102AQ96A19 550 aa15.52■□□□□ 0.07
CDH1-201ENST00000261769 TDRD3Q9H7E2 651 aaKnown RBP15.52■□□□□ 0.07
CDH1-201ENST00000261769 SSX2IPQ9Y2D8 614 aa15.52■□□□□ 0.07
CDH1-201ENST00000261769 CNTNAP4Q9C0A0 1308 aa15.52■□□□□ 0.07
CDH1-201ENST00000261769 PALM3A6NDB9 673 aaPredicted RBP15.51■□□□□ 0.07
CDH1-201ENST00000261769 GCFC2P16383 781 aaKnown RBP15.51■□□□□ 0.07
CDH1-201ENST00000261769 CKAP4Q07065 602 aaKnown RBP15.51■□□□□ 0.07
CDH1-201ENST00000261769 PAK1Q13153 545 aa15.51■□□□□ 0.07
CDH1-201ENST00000261769 EPHA10Q5JZY3 1008 aa15.51■□□□□ 0.07
CDH1-201ENST00000261769 PUS7LQ9H0K6 701 aaKnown RBP15.51■□□□□ 0.07
CDH1-201ENST00000261769 CWC15Q9P013 229 aaKnown RBP15.51■□□□□ 0.07
CDH1-201ENST00000261769 UTP14CQ5TAP6 766 aaKnown RBP15.51■□□□□ 0.07
CDH1-201ENST00000261769 TMCO3Q6UWJ1 677 aa15.51■□□□□ 0.07
CDH1-201ENST00000261769 LEKR1Q6ZMV7 388 aa15.51■□□□□ 0.07
CDH1-201ENST00000261769 LSG1Q9H089 658 aaKnown RBP15.51■□□□□ 0.07
CDH1-201ENST00000261769 TECPR2O15040 1411 aa15.51■□□□□ 0.07
CDH1-201ENST00000261769 ZNF202O95125 648 aa15.51■□□□□ 0.07
CDH1-201ENST00000261769 CYP21A2P08686 494 aa15.51■□□□□ 0.07
CDH1-201ENST00000261769 PDIA3P30101 505 aaKnown RBP15.51■□□□□ 0.07
CDH1-201ENST00000261769 PRR5LQ6MZQ0 368 aa15.51■□□□□ 0.07
CDH1-201ENST00000261769 KCTD1Q719H9 257 aa15.51■□□□□ 0.07
CDH1-201ENST00000261769 DGKHQ86XP1 1220 aa15.51■□□□□ 0.07
CDH1-201ENST00000261769 GOLGA5Q8TBA6 731 aa15.51■□□□□ 0.07
CDH1-201ENST00000261769 PRKAG2Q9UGJ0 569 aa15.51■□□□□ 0.07
CDH1-201ENST00000261769 FBXO40Q9UH90 709 aa15.51■□□□□ 0.07
CDH1-201ENST00000261769 CTNND2Q9UQB3 1225 aa15.51■□□□□ 0.07
CDH1-201ENST00000261769 MCAMP43121 646 aa15.51■□□□□ 0.07
CDH1-201ENST00000261769 SMC1AQ14683 1233 aaKnown RBP15.51■□□□□ 0.07
CDH1-201ENST00000261769 SPECC1Q5M775 1068 aa15.51■□□□□ 0.07
CDH1-201ENST00000261769 EXOC8Q8IYI6 725 aa15.51■□□□□ 0.07
CDH1-201ENST00000261769 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.51■□□□□ 0.07
CDH1-201ENST00000261769 CPDO75976 1380 aa15.5■□□□□ 0.07
CDH1-201ENST00000261769 CCDC175P0C221 793 aa15.5■□□□□ 0.07
CDH1-201ENST00000261769 TRAPPC10P48553 1259 aa15.5■□□□□ 0.07
CDH1-201ENST00000261769 GPSM2P81274 684 aa15.5■□□□□ 0.07
CDH1-201ENST00000261769 SF3B3Q15393 1217 aaKnown RBP15.5■□□□□ 0.07
CDH1-201ENST00000261769 FAM173BQ6P4H8 233 aa15.5■□□□□ 0.07
CDH1-201ENST00000261769 UIMC1Q96RL1 719 aa15.5■□□□□ 0.07
CDH1-201ENST00000261769 WDR11Q9BZH6 1224 aa15.5■□□□□ 0.07
CDH1-201ENST00000261769 TSPYL1Q9H0U9 437 aa15.5■□□□□ 0.07
CDH1-201ENST00000261769 SUGCTQ9HAC7 445 aa15.5■□□□□ 0.07
CDH1-201ENST00000261769 KDM4FA0A1W2PPD8 638 aa15.5■□□□□ 0.07
CDH1-201ENST00000261769 H0YHG0 523 aa15.5■□□□□ 0.07
CDH1-201ENST00000261769 CHRNA5P30532 468 aa15.5■□□□□ 0.07
CDH1-201ENST00000261769 YWHAEP62258 255 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms