RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 CETN2P41208 172 aa18.02■□□□□ 0.47
SREBF1-201ENST00000261646 RPS6KA1Q15418 735 aa18.02■□□□□ 0.47
SREBF1-201ENST00000261646 CASP1P29466 404 aa18.01■□□□□ 0.47
SREBF1-201ENST00000261646 GGCXP38435 758 aa18.01■□□□□ 0.47
SREBF1-201ENST00000261646 SUGCTQ9HAC7 445 aa18.01■□□□□ 0.47
SREBF1-201ENST00000261646 MPHOSPH10O00566 681 aaKnown RBP18.01■□□□□ 0.47
SREBF1-201ENST00000261646 FOXN1O15353 648 aa18.01■□□□□ 0.47
SREBF1-201ENST00000261646 PEX19P40855 299 aa18.01■□□□□ 0.47
SREBF1-201ENST00000261646 MUM1L1Q5H9M0 696 aa18.01■□□□□ 0.47
SREBF1-201ENST00000261646 TBC1D31Q96DN5 1066 aa18.01■□□□□ 0.47
SREBF1-201ENST00000261646 MTRF1LQ9UGC7 380 aaKnown RBP18.01■□□□□ 0.47
SREBF1-201ENST00000261646 TMEM110-MUSTN1A8MSY1 372 aa18.01■□□□□ 0.47
SREBF1-201ENST00000261646 CLTAP09496 248 aa18.01■□□□□ 0.47
SREBF1-201ENST00000261646 CNNM4Q6P4Q7 775 aa18.01■□□□□ 0.47
SREBF1-201ENST00000261646 DYMQ7RTS9 669 aa18.01■□□□□ 0.47
SREBF1-201ENST00000261646 TEX13AQ9BXU3 409 aaPredicted RBP18.01■□□□□ 0.47
SREBF1-201ENST00000261646 PCDHB6Q9Y5E3 794 aa18.01■□□□□ 0.47
SREBF1-201ENST00000261646 GKAP1Q5VSY0 366 aaPredicted RBP18.01■□□□□ 0.47
SREBF1-201ENST00000261646 DAAM2Q86T65 1068 aa18.01■□□□□ 0.47
SREBF1-201ENST00000261646 EPSTI1Q96J88 318 aa18.01■□□□□ 0.47
SREBF1-201ENST00000261646 FBXO3Q9UK99 471 aa18.01■□□□□ 0.47
SREBF1-201ENST00000261646 EPHB4P54760 987 aa18■□□□□ 0.47
SREBF1-201ENST00000261646 GRIPAP1Q4V328 841 aa18■□□□□ 0.47
SREBF1-201ENST00000261646 LRRN4CLQ8ND94 238 aa18■□□□□ 0.47
SREBF1-201ENST00000261646 REREQ9P2R6 1566 aa18■□□□□ 0.47
SREBF1-201ENST00000261646 SH3TC1Q8TE82 1336 aa18■□□□□ 0.47
SREBF1-201ENST00000261646 PLEKHG1Q9ULL1 1385 aa18■□□□□ 0.47
SREBF1-201ENST00000261646 B4DLN1 442 aa18■□□□□ 0.47
SREBF1-201ENST00000261646 GTPBP6O43824 516 aaPredicted RBP18■□□□□ 0.47
SREBF1-201ENST00000261646 PCK1P35558 622 aa18■□□□□ 0.47
SREBF1-201ENST00000261646 NNTQ13423 1086 aa18■□□□□ 0.47
SREBF1-201ENST00000261646 FMNL3Q8IVF7 1028 aa18■□□□□ 0.47
SREBF1-201ENST00000261646 CCDC24Q8N4L8 307 aa18■□□□□ 0.47
SREBF1-201ENST00000261646 NIP7Q9Y221 180 aaKnown RBP eCLIP18■□□□□ 0.47
SREBF1-201ENST00000261646 RPN1P04843 607 aaKnown RBP18■□□□□ 0.47
SREBF1-201ENST00000261646 PARP1P09874 1014 aaKnown RBP18■□□□□ 0.47
SREBF1-201ENST00000261646 TRMT1LQ7Z2T5 733 aaKnown RBP18■□□□□ 0.47
SREBF1-201ENST00000261646 EPB41L5Q9HCM4 733 aa18■□□□□ 0.47
SREBF1-201ENST00000261646 C6orf50Q9HD87 102 aa18■□□□□ 0.47
SREBF1-201ENST00000261646 CRB1P82279 1406 aa18■□□□□ 0.47
SREBF1-201ENST00000261646 PPP1R2P41236 205 aa17.99■□□□□ 0.47
SREBF1-201ENST00000261646 KLHL30Q0D2K2 578 aa17.99■□□□□ 0.47
SREBF1-201ENST00000261646 NEDD9Q14511 834 aa17.99■□□□□ 0.47
SREBF1-201ENST00000261646 SNCBQ16143 134 aa17.99■□□□□ 0.47
SREBF1-201ENST00000261646 STOX1Q6ZVD7 989 aa17.99■□□□□ 0.47
SREBF1-201ENST00000261646 MCM9Q9NXL9 1143 aa17.99■□□□□ 0.47
SREBF1-201ENST00000261646 TSKSQ9UJT2 592 aa17.99■□□□□ 0.47
SREBF1-201ENST00000261646 FAM184BQ9ULE4 1060 aa17.99■□□□□ 0.47
SREBF1-201ENST00000261646 CDC25AP30304 524 aa17.99■□□□□ 0.47
SREBF1-201ENST00000261646 RESP18Q5W5W9 173 aa17.99■□□□□ 0.47
SREBF1-201ENST00000261646 IFNL3Q8IZI9 196 aa17.99■□□□□ 0.47
SREBF1-201ENST00000261646 TUBGCP2Q9BSJ2 902 aa17.99■□□□□ 0.47
SREBF1-201ENST00000261646 UTP11Q9Y3A2 253 aaKnown RBP17.99■□□□□ 0.47
SREBF1-201ENST00000261646 NEXMIFQ5QGS0 1516 aa17.99■□□□□ 0.47
SREBF1-201ENST00000261646 PDE6AP16499 860 aa17.99■□□□□ 0.47
SREBF1-201ENST00000261646 CETN1Q12798 172 aa17.99■□□□□ 0.47
SREBF1-201ENST00000261646 ANKIB1Q9P2G1 1089 aa17.99■□□□□ 0.47
SREBF1-201ENST00000261646 MYO3AQ8NEV4 1616 aa17.99■□□□□ 0.47
SREBF1-201ENST00000261646 FAM170AA1A519 330 aa17.98■□□□□ 0.47
SREBF1-201ENST00000261646 KCNK3O14649 394 aa17.98■□□□□ 0.47
SREBF1-201ENST00000261646 N4BP1O75113 896 aaKnown RBP17.98■□□□□ 0.47
SREBF1-201ENST00000261646 TXKP42681 527 aa17.98■□□□□ 0.47
SREBF1-201ENST00000261646 TNNI2P48788 182 aa17.98■□□□□ 0.47
SREBF1-201ENST00000261646 KRT31Q15323 416 aa17.98■□□□□ 0.47
SREBF1-201ENST00000261646 DCAF17Q5H9S7 520 aaPredicted RBP17.98■□□□□ 0.47
SREBF1-201ENST00000261646 IFT74Q96LB3 600 aa17.98■□□□□ 0.47
SREBF1-201ENST00000261646 PUS7LQ9H0K6 701 aaKnown RBP17.98■□□□□ 0.47
SREBF1-201ENST00000261646 SHC4Q6S5L8 630 aa17.98■□□□□ 0.47
SREBF1-201ENST00000261646 ALDH8A1Q9H2A2 487 aaPredicted RBP17.98■□□□□ 0.47
SREBF1-201ENST00000261646 HDAC6Q9UBN7 1215 aa17.98■□□□□ 0.47
SREBF1-201ENST00000261646 HEXIM1O94992 359 aaKnown RBP17.98■□□□□ 0.47
SREBF1-201ENST00000261646 RIN2Q8WYP3 895 aaPredicted RBP17.98■□□□□ 0.47
SREBF1-201ENST00000261646 MRPL44Q9H9J2 332 aaKnown RBP17.98■□□□□ 0.47
SREBF1-201ENST00000261646 CAMSAP1Q5T5Y3 1602 aa17.98■□□□□ 0.47
SREBF1-201ENST00000261646 INO80Q9ULG1 1556 aaPredicted RBP17.98■□□□□ 0.47
SREBF1-201ENST00000261646 TSGA10IPQ3SY00 556 aa17.98■□□□□ 0.47
SREBF1-201ENST00000261646 TBC1D5Q92609 795 aa17.98■□□□□ 0.47
SREBF1-201ENST00000261646 KRT12Q99456 494 aa17.98■□□□□ 0.47
SREBF1-201ENST00000261646 FOXP1Q9H334 677 aaPredicted RBP17.98■□□□□ 0.47
SREBF1-201ENST00000261646 ATP11AP98196 1134 aa17.97■□□□□ 0.47
SREBF1-201ENST00000261646 CCDC152Q4G0S7 254 aa17.97■□□□□ 0.47
SREBF1-201ENST00000261646 ZSCAN29Q8IWY8 852 aaPredicted RBP17.97■□□□□ 0.47
SREBF1-201ENST00000261646 ENGASEQ8NFI3 743 aa17.97■□□□□ 0.47
SREBF1-201ENST00000261646 CPSF2Q9P2I0 782 aaKnown RBP17.97■□□□□ 0.47
SREBF1-201ENST00000261646 STK38LQ9Y2H1 464 aa17.97■□□□□ 0.47
SREBF1-201ENST00000261646 TBCAO75347 108 aaKnown RBP17.97■□□□□ 0.47
SREBF1-201ENST00000261646 EHHADHQ08426 723 aa17.97■□□□□ 0.47
SREBF1-201ENST00000261646 PPP2R5AQ15172 486 aa17.97■□□□□ 0.47
SREBF1-201ENST00000261646 N4BP2L2Q92802 583 aaPredicted RBP17.97■□□□□ 0.47
SREBF1-201ENST00000261646 CCDC77Q9BR77 488 aa17.97■□□□□ 0.47
SREBF1-201ENST00000261646 FUT8Q9BYC5 575 aa17.97■□□□□ 0.47
SREBF1-201ENST00000261646 PPP1R12CQ9BZL4 782 aa17.97■□□□□ 0.47
SREBF1-201ENST00000261646 KIDINS220Q9ULH0 1771 aa17.97■□□□□ 0.47
SREBF1-201ENST00000261646 ABCA9Q8IUA7 1624 aa17.97■□□□□ 0.47
SREBF1-201ENST00000261646 CALCOCO2Q13137 446 aa17.97■□□□□ 0.47
SREBF1-201ENST00000261646 LRCH2Q5VUJ6 765 aa17.97■□□□□ 0.47
SREBF1-201ENST00000261646 NCAPGQ9BPX3 1015 aa17.97■□□□□ 0.47
SREBF1-201ENST00000261646 RASSF7Q02833 373 aa17.96■□□□□ 0.47
SREBF1-201ENST00000261646 SETDB1Q15047 1291 aa17.96■□□□□ 0.47
SREBF1-201ENST00000261646 PPP2R5BQ15173 497 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms