RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 USP48Q86UV5 1035 aa21.67■■□□□ 1.06
COL4A3BP-201ENST00000261415 FOXD4L4Q8WXT5 416 aaPredicted RBP21.67■■□□□ 1.06
COL4A3BP-201ENST00000261415 ANKS1AQ92625 1134 aa21.67■■□□□ 1.06
COL4A3BP-201ENST00000261415 CCDC17Q96LX7 622 aa21.67■■□□□ 1.06
COL4A3BP-201ENST00000261415 C16orf45Q96MC5 204 aaPredicted RBP21.67■■□□□ 1.06
COL4A3BP-201ENST00000261415 BCCIPQ9P287 314 aaKnown RBP eCLIP21.67■■□□□ 1.06
COL4A3BP-201ENST00000261415 CERKLQ49MI3 558 aaPredicted RBP21.66■■□□□ 1.06
COL4A3BP-201ENST00000261415 APOBEC3FQ8IUX4 373 aaKnown RBP21.66■■□□□ 1.06
COL4A3BP-201ENST00000261415 CCDC144CPQ8IYA2 1237 aa21.66■■□□□ 1.06
COL4A3BP-201ENST00000261415 CEP95Q96GE4 821 aa21.66■■□□□ 1.06
COL4A3BP-201ENST00000261415 TEPSINQ96N21 525 aa21.66■■□□□ 1.06
COL4A3BP-201ENST00000261415 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.66■■□□□ 1.06
COL4A3BP-201ENST00000261415 GGA3Q9NZ52 723 aa21.66■■□□□ 1.06
COL4A3BP-201ENST00000261415 GOLGA8AA7E2F4 631 aa21.66■■□□□ 1.06
COL4A3BP-201ENST00000261415 DHX16O60231 1041 aaKnown RBP21.66■■□□□ 1.06
COL4A3BP-201ENST00000261415 CTDNEP1O95476 244 aa21.66■■□□□ 1.06
COL4A3BP-201ENST00000261415 GJB2P29033 226 aa21.66■■□□□ 1.06
COL4A3BP-201ENST00000261415 RCAN1P53805 252 aa21.66■■□□□ 1.06
COL4A3BP-201ENST00000261415 CATIPQ7Z7H3 387 aa21.66■■□□□ 1.06
COL4A3BP-201ENST00000261415 CHMP4CQ96CF2 233 aa21.66■■□□□ 1.06
COL4A3BP-201ENST00000261415 LLPHQ9BRT6 129 aaKnown RBP21.66■■□□□ 1.06
COL4A3BP-201ENST00000261415 DEFB129Q9H1M3 183 aa21.66■■□□□ 1.06
COL4A3BP-201ENST00000261415 STX8Q9UNK0 236 aa21.66■■□□□ 1.06
COL4A3BP-201ENST00000261415 NSUN7Q8NE18 718 aaKnown RBP21.65■■□□□ 1.06
COL4A3BP-201ENST00000261415 ERO1AQ96HE7 468 aa21.65■■□□□ 1.06
COL4A3BP-201ENST00000261415 IGKV6D-41A0A0C4DH26 115 aa21.64■■□□□ 1.06
COL4A3BP-201ENST00000261415 MPHOSPH10O00566 681 aaKnown RBP21.64■■□□□ 1.06
COL4A3BP-201ENST00000261415 JAK2O60674 1132 aa21.64■■□□□ 1.06
COL4A3BP-201ENST00000261415 GADD45BO75293 160 aaPredicted RBP21.64■■□□□ 1.06
COL4A3BP-201ENST00000261415 NAA30Q147X3 362 aaPredicted RBP21.64■■□□□ 1.06
COL4A3BP-201ENST00000261415 NUP133Q8WUM0 1156 aa21.64■■□□□ 1.06
COL4A3BP-201ENST00000261415 KAT14Q9H8E8 782 aa21.64■■□□□ 1.06
COL4A3BP-201ENST00000261415 TBC1D12O60347 775 aa21.64■■□□□ 1.05
COL4A3BP-201ENST00000261415 CDC27P30260 824 aa21.64■■□□□ 1.05
COL4A3BP-201ENST00000261415 NOVP48745 357 aa21.64■■□□□ 1.05
COL4A3BP-201ENST00000261415 TROAPQ12815 778 aa21.64■■□□□ 1.05
COL4A3BP-201ENST00000261415 ICE2Q659A1 982 aa21.64■■□□□ 1.05
COL4A3BP-201ENST00000261415 SPC24Q8NBT2 197 aa21.64■■□□□ 1.05
COL4A3BP-201ENST00000261415 SMARCC2Q8TAQ2 1214 aa21.64■■□□□ 1.05
COL4A3BP-201ENST00000261415 MYCBPQ99417 103 aaPredicted RBP21.64■■□□□ 1.05
COL4A3BP-201ENST00000261415 BAZ2BQ9UIF8 2168 aaKnown RBP21.63■■□□□ 1.05
COL4A3BP-201ENST00000261415 DDAH1O94760 285 aa21.63■■□□□ 1.05
COL4A3BP-201ENST00000261415 TMEM47Q9BQJ4 181 aa21.63■■□□□ 1.05
COL4A3BP-201ENST00000261415 FAM217BQ9NTX9 383 aaPredicted RBP21.63■■□□□ 1.05
COL4A3BP-201ENST00000261415 MTMR4Q9NYA4 1195 aa21.63■■□□□ 1.05
COL4A3BP-201ENST00000261415 CPLX1O14810 134 aa21.63■■□□□ 1.05
COL4A3BP-201ENST00000261415 ADD1P35611 737 aaKnown RBP21.63■■□□□ 1.05
COL4A3BP-201ENST00000261415 RTN1Q16799 776 aa21.63■■□□□ 1.05
COL4A3BP-201ENST00000261415 MIGA2Q7L4E1 593 aa21.63■■□□□ 1.05
COL4A3BP-201ENST00000261415 PNMA1Q8ND90 353 aa21.63■■□□□ 1.05
COL4A3BP-201ENST00000261415 PITPNM2Q9BZ72 1349 aa21.63■■□□□ 1.05
COL4A3BP-201ENST00000261415 DOCK1Q14185 1865 aa21.62■■□□□ 1.05
COL4A3BP-201ENST00000261415 PTPDC1A2A3K4 754 aa21.62■■□□□ 1.05
COL4A3BP-201ENST00000261415 GDF11O95390 407 aa21.62■■□□□ 1.05
COL4A3BP-201ENST00000261415 CALM1P0DP23 149 aa21.62■■□□□ 1.05
COL4A3BP-201ENST00000261415 CALM2P0DP24 149 aa21.62■■□□□ 1.05
COL4A3BP-201ENST00000261415 CALM3P0DP25 149 aa21.62■■□□□ 1.05
COL4A3BP-201ENST00000261415 SHROOM1Q2M3G4 852 aaPredicted RBP21.62■■□□□ 1.05
COL4A3BP-201ENST00000261415 FBXO38Q6PIJ6 1188 aa21.62■■□□□ 1.05
COL4A3BP-201ENST00000261415 CLEC10AQ8IUN9 316 aa21.62■■□□□ 1.05
COL4A3BP-201ENST00000261415 FANCBQ8NB91 859 aa21.62■■□□□ 1.05
COL4A3BP-201ENST00000261415 FUCA2Q9BTY2 467 aa21.62■■□□□ 1.05
COL4A3BP-201ENST00000261415 WDR33Q9C0J8 1336 aaKnown RBP21.62■■□□□ 1.05
COL4A3BP-201ENST00000261415 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.62■■□□□ 1.05
COL4A3BP-201ENST00000261415 CASQ1P31415 396 aa21.62■■□□□ 1.05
COL4A3BP-201ENST00000261415 MAP3K10Q02779 954 aa21.62■■□□□ 1.05
COL4A3BP-201ENST00000261415 RRP1BQ14684 758 aaKnown RBP21.62■■□□□ 1.05
COL4A3BP-201ENST00000261415 ABCB5Q2M3G0 1257 aa21.62■■□□□ 1.05
COL4A3BP-201ENST00000261415 CEP135Q66GS9 1140 aa21.62■■□□□ 1.05
COL4A3BP-201ENST00000261415 NCAPGQ9BPX3 1015 aa21.62■■□□□ 1.05
COL4A3BP-201ENST00000261415 UBE2HP62256 183 aa21.61■■□□□ 1.05
COL4A3BP-201ENST00000261415 DDX11Q96FC9 970 aa21.61■■□□□ 1.05
COL4A3BP-201ENST00000261415 CWC15Q9P013 229 aaKnown RBP21.61■■□□□ 1.05
COL4A3BP-201ENST00000261415 PTGS1P23219 599 aa21.6■■□□□ 1.05
COL4A3BP-201ENST00000261415 EPHX2P34913 555 aa21.6■■□□□ 1.05
COL4A3BP-201ENST00000261415 TPD52L1Q16890 204 aaPredicted RBP21.6■■□□□ 1.05
COL4A3BP-201ENST00000261415 TMEM179Q6ZVK1 233 aa21.6■■□□□ 1.05
COL4A3BP-201ENST00000261415 PPFIA3O75145 1194 aa21.6■■□□□ 1.05
COL4A3BP-201ENST00000261415 TOP1P11387 765 aaKnown RBP21.6■■□□□ 1.05
COL4A3BP-201ENST00000261415 PPP2R5BQ15173 497 aa21.6■■□□□ 1.05
COL4A3BP-201ENST00000261415 NTRK3Q16288 839 aa21.6■■□□□ 1.05
COL4A3BP-201ENST00000261415 GOLGA6L1Q8N7Z2 621 aa21.6■■□□□ 1.05
COL4A3BP-201ENST00000261415 CCDC196A0A1B0GTZ2 297 aa21.59■■□□□ 1.05
COL4A3BP-201ENST00000261415 AP5Z1O43299 807 aa21.59■■□□□ 1.05
COL4A3BP-201ENST00000261415 TTLL1O95922 423 aa21.59■■□□□ 1.05
COL4A3BP-201ENST00000261415 TPM4P67936 248 aa21.59■■□□□ 1.05
COL4A3BP-201ENST00000261415 JAG1P78504 1218 aa21.59■■□□□ 1.05
COL4A3BP-201ENST00000261415 NBPF12Q5TAG4 269 aaPredicted RBP21.59■■□□□ 1.05
COL4A3BP-201ENST00000261415 CPLX2Q6PUV4 134 aaKnown RBP21.59■■□□□ 1.05
COL4A3BP-201ENST00000261415 USP50Q70EL3 339 aaPredicted RBP21.59■■□□□ 1.05
COL4A3BP-201ENST00000261415 ZBTB9Q96C00 473 aa21.59■■□□□ 1.05
COL4A3BP-201ENST00000261415 PPP2R3BQ9Y5P8 575 aa21.59■■□□□ 1.05
COL4A3BP-201ENST00000261415 TCHHQ07283 1943 aa21.59■■□□□ 1.05
COL4A3BP-201ENST00000261415 CDKL5O76039 1030 aa21.59■■□□□ 1.05
COL4A3BP-201ENST00000261415 GH2P01242 217 aa21.59■■□□□ 1.05
COL4A3BP-201ENST00000261415 GUCY1A2P33402 732 aa21.59■■□□□ 1.05
COL4A3BP-201ENST00000261415 LOC102724159A0A0B4J2E5 919 aa21.58■■□□□ 1.05
COL4A3BP-201ENST00000261415 IQCA1LA6NCM1 817 aa21.58■■□□□ 1.05
COL4A3BP-201ENST00000261415 SYT1P21579 422 aa21.58■■□□□ 1.05
COL4A3BP-201ENST00000261415 GPS2Q13227 327 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms