RNA–Protein interactions for RNA: ENST00000260197.11

SORL1-201, Transcript of sortilin related receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORL1, Length 10,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-201ENST00000260197 ACSBG1Q96GR2 724 aa12.84□□□□□ -0.35
SORL1-201ENST00000260197 PARP3Q9Y6F1 533 aa12.84□□□□□ -0.35
SORL1-201ENST00000260197 ZNF500O60304 480 aaPredicted RBP12.84□□□□□ -0.35
SORL1-201ENST00000260197 STX2P32856 288 aa12.84□□□□□ -0.35
SORL1-201ENST00000260197 PSMB7Q99436 277 aa12.84□□□□□ -0.35
SORL1-201ENST00000260197 LSM14BQ9BX40 385 aaKnown RBP12.84□□□□□ -0.35
SORL1-201ENST00000260197 JAG2Q9Y219 1238 aa12.84□□□□□ -0.35
SORL1-201ENST00000260197 CDK12Q9NYV4 1490 aaPredicted RBP12.84□□□□□ -0.35
SORL1-201ENST00000260197 KRIT1O00522 736 aa12.84□□□□□ -0.35
SORL1-201ENST00000260197 STMN1P16949 149 aa12.84□□□□□ -0.35
SORL1-201ENST00000260197 TRIML1Q8N9V2 468 aa12.84□□□□□ -0.35
SORL1-201ENST00000260197 DDX21Q9NR30 783 aaKnown RBP eCLIP12.84□□□□□ -0.35
SORL1-201ENST00000260197 KIAA1468Q9P260 1216 aa12.84□□□□□ -0.35
SORL1-201ENST00000260197 MADDQ8WXG6 1647 aa12.84□□□□□ -0.35
SORL1-201ENST00000260197 STAM2O75886 525 aa12.84□□□□□ -0.35
SORL1-201ENST00000260197 UFL1O94874 794 aa12.84□□□□□ -0.35
SORL1-201ENST00000260197 CACYBPQ9HB71 228 aaKnown RBP12.84□□□□□ -0.35
SORL1-201ENST00000260197 THAP12O43422 761 aa12.83□□□□□ -0.35
SORL1-201ENST00000260197 RNF40O75150 1001 aa12.83□□□□□ -0.35
SORL1-201ENST00000260197 PARP10Q53GL7 1025 aa12.83□□□□□ -0.35
SORL1-201ENST00000260197 ZNF790Q6PG37 636 aa12.83□□□□□ -0.35
SORL1-201ENST00000260197 RNF34Q969K3 372 aa12.83□□□□□ -0.35
SORL1-201ENST00000260197 TTC36A6NLP5 189 aa12.83□□□□□ -0.36
SORL1-201ENST00000260197 ZBTB7BO15156 539 aaPredicted RBP12.83□□□□□ -0.36
SORL1-201ENST00000260197 IWS1Q96ST2 819 aa12.83□□□□□ -0.36
SORL1-201ENST00000260197 TROVE2P10155 538 aaKnown RBP eCLIP12.83□□□□□ -0.36
SORL1-201ENST00000260197 IP6K1Q92551 441 aa12.83□□□□□ -0.36
SORL1-201ENST00000260197 DSCC1Q9BVC3 393 aa12.83□□□□□ -0.36
SORL1-201ENST00000260197 HERC4Q5GLZ8 1057 aaPredicted RBP12.83□□□□□ -0.36
SORL1-201ENST00000260197 NBPF14Q5TI25 921 aa12.83□□□□□ -0.36
SORL1-201ENST00000260197 KLHL7Q8IXQ5 586 aa12.83□□□□□ -0.36
SORL1-201ENST00000260197 CAPS2Q9BXY5 557 aa12.83□□□□□ -0.36
SORL1-201ENST00000260197 MGARPQ8TDB4 240 aa12.83□□□□□ -0.36
SORL1-201ENST00000260197 RRAGDQ9NQL2 400 aaPredicted RBP12.83□□□□□ -0.36
SORL1-201ENST00000260197 FAM207AQ9NSI2 230 aaPredicted RBP12.83□□□□□ -0.36
SORL1-201ENST00000260197 AATFQ9NY61 560 aaKnown RBP eCLIP12.83□□□□□ -0.36
SORL1-201ENST00000260197 RP1P56715 2156 aa12.83□□□□□ -0.36
SORL1-201ENST00000260197 KCNG1Q9UIX4 513 aa12.83□□□□□ -0.36
SORL1-201ENST00000260197 EVI5O60447 810 aa12.83□□□□□ -0.36
SORL1-201ENST00000260197 PHLDB3Q6NSJ2 640 aa12.83□□□□□ -0.36
SORL1-201ENST00000260197 SNX29Q8TEQ0 813 aa12.83□□□□□ -0.36
SORL1-201ENST00000260197 RUNDC3BQ96NL0 473 aa12.83□□□□□ -0.36
SORL1-201ENST00000260197 GNPATO15228 680 aa12.83□□□□□ -0.36
SORL1-201ENST00000260197 CUL4BQ13620 913 aa12.83□□□□□ -0.36
SORL1-201ENST00000260197 GSDMBQ8TAX9 411 aa12.83□□□□□ -0.36
SORL1-201ENST00000260197 TM6SF1Q9BZW5 370 aa12.83□□□□□ -0.36
SORL1-201ENST00000260197 RIC8AQ9NPQ8 531 aa12.83□□□□□ -0.36
SORL1-201ENST00000260197 V9GY48 417 aaPredicted RBP12.83□□□□□ -0.36
SORL1-201ENST00000260197 GUCY2FP51841 1108 aa12.82□□□□□ -0.36
SORL1-201ENST00000260197 BCL2L12Q9HB09 334 aa12.82□□□□□ -0.36
SORL1-201ENST00000260197 HIP1RO75146 1068 aa12.82□□□□□ -0.36
SORL1-201ENST00000260197 DMP1Q13316 513 aaPredicted RBP12.82□□□□□ -0.36
SORL1-201ENST00000260197 ANKRD20A3Q5VUR7 823 aa12.82□□□□□ -0.36
SORL1-201ENST00000260197 ADALQ6DHV7 355 aa12.82□□□□□ -0.36
SORL1-201ENST00000260197 ABCC4O15439 1325 aa12.82□□□□□ -0.36
SORL1-201ENST00000260197 MRRFQ96E11 262 aaKnown RBP12.82□□□□□ -0.36
SORL1-201ENST00000260197 ARMT1Q9H993 441 aa12.82□□□□□ -0.36
SORL1-201ENST00000260197 CARMIL3Q8ND23 1372 aa12.82□□□□□ -0.36
SORL1-201ENST00000260197 FRMPD1Q5SYB0 1578 aa12.82□□□□□ -0.36
SORL1-201ENST00000260197 EXOC3O60645 756 aa12.82□□□□□ -0.36
SORL1-201ENST00000260197 HOXC9P31274 260 aa12.82□□□□□ -0.36
SORL1-201ENST00000260197 HVCN1Q96D96 273 aa12.82□□□□□ -0.36
SORL1-201ENST00000260197 IQGAP1P46940 1657 aa12.82□□□□□ -0.36
SORL1-201ENST00000260197 KRT81Q14533 505 aa12.82□□□□□ -0.36
SORL1-201ENST00000260197 BRDTQ58F21 947 aaPredicted RBP12.82□□□□□ -0.36
SORL1-201ENST00000260197 RILPQ96NA2 401 aa12.82□□□□□ -0.36
SORL1-201ENST00000260197 BZW2Q9Y6E2 419 aaKnown RBP12.82□□□□□ -0.36
SORL1-201ENST00000260197 ANKRD26Q9UPS8 1709 aa12.82□□□□□ -0.36
SORL1-201ENST00000260197 HELBQ8NG08 1087 aaPredicted RBP12.82□□□□□ -0.36
SORL1-201ENST00000260197 PASKQ96RG2 1323 aa12.81□□□□□ -0.36
SORL1-201ENST00000260197 RAD51AP2Q09MP3 1159 aa12.81□□□□□ -0.36
SORL1-201ENST00000260197 KRT40Q6A162 431 aa12.81□□□□□ -0.36
SORL1-201ENST00000260197 SND1Q7KZF4 910 aaKnown RBP eCLIP12.81□□□□□ -0.365e-7■■■□□ 16.9
SORL1-201ENST00000260197 DIS3L2Q8IYB7 885 aaKnown RBP12.81□□□□□ -0.36
SORL1-201ENST00000260197 STK38LQ9Y2H1 464 aa12.81□□□□□ -0.36
SORL1-201ENST00000260197 MAN1A1P33908 653 aa12.81□□□□□ -0.36
SORL1-201ENST00000260197 NCAPH2Q6IBW4 605 aa12.81□□□□□ -0.36
SORL1-201ENST00000260197 NONOQ15233 471 aaKnown RBP eCLIP12.81□□□□□ -0.36
SORL1-201ENST00000260197 NSMCE1Q8WV22 266 aa12.81□□□□□ -0.36
SORL1-201ENST00000260197 VPS37BQ9H9H4 285 aa12.81□□□□□ -0.36
SORL1-201ENST00000260197 ATP10AO60312 1499 aa12.81□□□□□ -0.36
SORL1-201ENST00000260197 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.81□□□□□ -0.36
SORL1-201ENST00000260197 ADKP55263 362 aaKnown RBP12.81□□□□□ -0.36
SORL1-201ENST00000260197 SNCBQ16143 134 aa12.81□□□□□ -0.36
SORL1-201ENST00000260197 SLFN12Q8IYM2 578 aa12.81□□□□□ -0.36
SORL1-201ENST00000260197 TEKT1Q969V4 418 aa12.81□□□□□ -0.36
SORL1-201ENST00000260197 MRFAP1L1Q96HT8 127 aa12.81□□□□□ -0.36
SORL1-201ENST00000260197 SLC12A2P55011 1212 aa12.81□□□□□ -0.36
SORL1-201ENST00000260197 CCDC13Q8IYE1 715 aa12.81□□□□□ -0.36
SORL1-201ENST00000260197 NSFL1CQ9UNZ2 370 aaKnown RBP12.81□□□□□ -0.36
SORL1-201ENST00000260197 ABCA6Q8N139 1617 aa12.81□□□□□ -0.36
SORL1-201ENST00000260197 GAS7O60861 476 aa12.81□□□□□ -0.36
SORL1-201ENST00000260197 OR8K1Q8NGG5 319 aa12.81□□□□□ -0.36
SORL1-201ENST00000260197 RABGGTAQ92696 567 aa12.81□□□□□ -0.36
SORL1-201ENST00000260197 TRIM68Q6AZZ1 485 aa12.81□□□□□ -0.36
SORL1-201ENST00000260197 RNF168Q8IYW5 571 aaPredicted RBP12.8□□□□□ -0.36
SORL1-201ENST00000260197 DESI2Q9BSY9 194 aa12.8□□□□□ -0.36
SORL1-201ENST00000260197 PPP2R2CQ9Y2T4 447 aa12.8□□□□□ -0.36
SORL1-201ENST00000260197 E7EWF7 191 aa12.8□□□□□ -0.36
SORL1-201ENST00000260197 ARPP21Q9UBL0 812 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms