RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 TNFRSF25Q93038 417 aa31.77■■■□□ 2.68
CCM2-201ENST00000258781 CABP5Q9NP86 173 aa31.77■■■□□ 2.68
CCM2-201ENST00000258781 PFKFB1P16118 471 aa31.76■■■□□ 2.68
CCM2-201ENST00000258781 MICALL2Q8IY33 904 aa31.76■■■□□ 2.68
CCM2-201ENST00000258781 FAM177A1Q8N128 213 aaPredicted RBP31.76■■■□□ 2.68
CCM2-201ENST00000258781 DPF2Q92785 391 aa31.76■■■□□ 2.68
CCM2-201ENST00000258781 TRIM44Q96DX7 344 aaPredicted RBP31.76■■■□□ 2.68
CCM2-201ENST00000258781 DHX36Q9H2U1 1008 aaKnown RBP31.76■■■□□ 2.68
CCM2-201ENST00000258781 RNF181Q9P0P0 153 aa31.76■■■□□ 2.68
CCM2-201ENST00000258781 WNT10BO00744 389 aa31.76■■■□□ 2.67
CCM2-201ENST00000258781 CAVIN2O95810 425 aa31.76■■■□□ 2.67
CCM2-201ENST00000258781 SH3BP5LQ7L8J4 393 aa31.76■■■□□ 2.67
CCM2-201ENST00000258781 KRI1Q8N9T8 703 aaKnown RBP31.76■■■□□ 2.67
CCM2-201ENST00000258781 SPZ1Q9BXG8 430 aa31.76■■■□□ 2.67
CCM2-201ENST00000258781 MTMR4Q9NYA4 1195 aa31.76■■■□□ 2.67
CCM2-201ENST00000258781 CALML3P27482 149 aa31.75■■■□□ 2.67
CCM2-201ENST00000258781 SMARCA1P28370 1054 aa31.75■■■□□ 2.67
CCM2-201ENST00000258781 SHMT1P34896 483 aa31.75■■■□□ 2.67
CCM2-201ENST00000258781 NBPF9Q3BBW0 867 aa31.75■■■□□ 2.67
CCM2-201ENST00000258781 SPDYE2Q495Y8 402 aa31.75■■■□□ 2.67
CCM2-201ENST00000258781 RESP18Q5W5W9 173 aa31.75■■■□□ 2.67
CCM2-201ENST00000258781 ZNF70Q9UC06 446 aaPredicted RBP31.75■■■□□ 2.67
CCM2-201ENST00000258781 NOL7Q9UMY1 257 aaKnown RBP31.75■■■□□ 2.67
CCM2-201ENST00000258781 HPSEQ9Y251 543 aa31.75■■■□□ 2.67
CCM2-201ENST00000258781 DDTLA6NHG4 134 aaPredicted RBP31.74■■■□□ 2.67
CCM2-201ENST00000258781 PARP1P09874 1014 aaKnown RBP31.74■■■□□ 2.67
CCM2-201ENST00000258781 AKR1B1P15121 316 aa31.74■■■□□ 2.67
CCM2-201ENST00000258781 NLRP5P59047 1200 aa31.74■■■□□ 2.67
CCM2-201ENST00000258781 SLURP2P0DP57 97 aa31.74■■■□□ 2.67
CCM2-201ENST00000258781 SHC4Q6S5L8 630 aa31.74■■■□□ 2.67
CCM2-201ENST00000258781 TIGD1Q96MW7 591 aa31.74■■■□□ 2.67
CCM2-201ENST00000258781 CNOT7Q9UIV1 285 aaKnown RBP31.74■■■□□ 2.67
CCM2-201ENST00000258781 PCDHB6Q9Y5E3 794 aa31.74■■■□□ 2.67
CCM2-201ENST00000258781 ANO6Q4KMQ2 910 aa31.73■■■□□ 2.67
CCM2-201ENST00000258781 TRIM75PA6NK02 468 aa31.72■■■□□ 2.67
CCM2-201ENST00000258781 KLRF2D3W0D1 207 aa31.72■■■□□ 2.67
CCM2-201ENST00000258781 ZNF202O95125 648 aa31.72■■■□□ 2.67
CCM2-201ENST00000258781 BMP15O95972 392 aa31.72■■■□□ 2.67
CCM2-201ENST00000258781 PTPREP23469 700 aa31.72■■■□□ 2.67
CCM2-201ENST00000258781 SLC35G1Q2M3R5 365 aa31.72■■■□□ 2.67
CCM2-201ENST00000258781 SAMD7Q7Z3H4 446 aa31.72■■■□□ 2.67
CCM2-201ENST00000258781 SDF4Q9BRK5 362 aa31.72■■■□□ 2.67
CCM2-201ENST00000258781 TCP10L2B9ZVM9 353 aa31.72■■■□□ 2.67
CCM2-201ENST00000258781 GPR162Q16538 588 aa31.72■■■□□ 2.67
CCM2-201ENST00000258781 GPC2Q8N158 579 aa31.72■■■□□ 2.67
CCM2-201ENST00000258781 CCDC17Q96LX7 622 aa31.72■■■□□ 2.67
CCM2-201ENST00000258781 FBXO2Q9UK22 296 aaPredicted RBP31.72■■■□□ 2.67
CCM2-201ENST00000258781 CYTH3O43739 400 aa31.71■■■□□ 2.67
CCM2-201ENST00000258781 ENTPD3O75355 529 aa31.71■■■□□ 2.67
CCM2-201ENST00000258781 PPP4R3BQ5MIZ7 849 aa31.71■■■□□ 2.67
CCM2-201ENST00000258781 RBM26Q5T8P6 1007 aaKnown RBP31.71■■■□□ 2.67
CCM2-201ENST00000258781 C9orf131Q5VYM1 1079 aa31.71■■■□□ 2.67
CCM2-201ENST00000258781 PIBF1Q8WXW3 757 aa31.71■■■□□ 2.67
CCM2-201ENST00000258781 TMOD2Q9NZR1 351 aa31.71■■■□□ 2.67
CCM2-201ENST00000258781 MYH4Q9Y623 1939 aa31.7■■■□□ 2.67
CCM2-201ENST00000258781 STX1AQ16623 288 aa31.7■■■□□ 2.67
CCM2-201ENST00000258781 ZNF579Q8NAF0 562 aaKnown RBP31.7■■■□□ 2.67
CCM2-201ENST00000258781 CCDC148Q8NFR7 591 aa31.7■■■□□ 2.67
CCM2-201ENST00000258781 VEZTQ9HBM0 779 aa31.7■■■□□ 2.67
CCM2-201ENST00000258781 MTMR7Q9Y216 660 aa31.7■■■□□ 2.67
CCM2-201ENST00000258781 COL2A1P02458 1487 aaPredicted RBP31.7■■■□□ 2.67
CCM2-201ENST00000258781 CNTNAP1P78357 1384 aa31.7■■■□□ 2.66
CCM2-201ENST00000258781 ATRNL1Q5VV63 1379 aa31.7■■■□□ 2.66
CCM2-201ENST00000258781 FAM205CA6NFA0 338 aa31.69■■■□□ 2.66
CCM2-201ENST00000258781 VEGFAP15692 232 aaPredicted RBP31.69■■■□□ 2.66
CCM2-201ENST00000258781 SYKP43405 635 aa31.69■■■□□ 2.66
CCM2-201ENST00000258781 TRAPPC10P48553 1259 aa31.69■■■□□ 2.66
CCM2-201ENST00000258781 MMP14P50281 582 aa31.69■■■□□ 2.66
CCM2-201ENST00000258781 EARS2Q5JPH6 523 aaKnown RBP31.69■■■□□ 2.66
CCM2-201ENST00000258781 GALNT17Q6IS24 598 aa31.69■■■□□ 2.66
CCM2-201ENST00000258781 CLIC6Q96NY7 704 aa31.69■■■□□ 2.66
CCM2-201ENST00000258781 TTLL1O95922 423 aa31.69■■■□□ 2.66
CCM2-201ENST00000258781 TBC1D10BQ4KMP7 808 aaPredicted RBP31.69■■■□□ 2.66
CCM2-201ENST00000258781 ZSCAN29Q8IWY8 852 aaPredicted RBP31.69■■■□□ 2.66
CCM2-201ENST00000258781 DNAJC18Q9H819 358 aa31.69■■■□□ 2.66
CCM2-201ENST00000258781 PI4KBQ9UBF8 816 aa31.69■■■□□ 2.66
CCM2-201ENST00000258781 SRPRBQ9Y5M8 271 aaKnown RBP31.69■■■□□ 2.66
CCM2-201ENST00000258781 GOLGA8HP0CJ92 632 aa31.67■■■□□ 2.66
CCM2-201ENST00000258781 HS1BP3Q53T59 392 aa31.67■■■□□ 2.66
CCM2-201ENST00000258781 BLIDQ8IZY5 108 aa31.67■■■□□ 2.66
CCM2-201ENST00000258781 DAGLBQ8NCG7 672 aa31.67■■■□□ 2.66
CCM2-201ENST00000258781 CBX8Q9HC52 389 aa31.67■■■□□ 2.66
CCM2-201ENST00000258781 BARHL2Q9NY43 387 aa31.67■■■□□ 2.66
CCM2-201ENST00000258781 PCDHA4Q9UN74 947 aa31.67■■■□□ 2.66
CCM2-201ENST00000258781 MYO1BO43795 1136 aa31.67■■■□□ 2.66
CCM2-201ENST00000258781 ASPRV1Q53RT3 343 aa31.67■■■□□ 2.66
CCM2-201ENST00000258781 WWC2Q6AWC2 1192 aa31.67■■■□□ 2.66
CCM2-201ENST00000258781 USP17L2Q6R6M4 530 aa31.67■■■□□ 2.66
CCM2-201ENST00000258781 GPKOWQ92917 476 aaPredicted RBP eCLIP31.67■■■□□ 2.66
CCM2-201ENST00000258781 USP25Q9UHP3 1055 aa31.67■■■□□ 2.66
CCM2-201ENST00000258781 FAM196BA6NMK8 535 aa31.66■■■□□ 2.66
CCM2-201ENST00000258781 DDNO94850 711 aaPredicted RBP31.66■■■□□ 2.66
CCM2-201ENST00000258781 SNHG28P0DPA3 235 aa31.66■■■□□ 2.66
CCM2-201ENST00000258781 PDHBP11177 359 aa31.66■■■□□ 2.66
CCM2-201ENST00000258781 ATP2B1P20020 1258 aa31.66■■■□□ 2.66
CCM2-201ENST00000258781 FAM43AQ8N2R8 423 aa31.66■■■□□ 2.66
CCM2-201ENST00000258781 ANO10Q9NW15 660 aa31.66■■■□□ 2.66
CCM2-201ENST00000258781 GPRC5DQ9NZD1 345 aa31.66■■■□□ 2.66
CCM2-201ENST00000258781 ASTN2O75129 1339 aaPredicted RBP31.66■■■□□ 2.66
CCM2-201ENST00000258781 STXBP3O00186 592 aa31.65■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms