RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 ZBTB21Q9ULJ3 1066 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 SNX14Q9Y5W7 946 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 MYH14Q7Z406 1995 aaKnown RBP5.28□□□□□ -1.56
RC3H1-201ENST00000258349 CCDC169A6NNP5 214 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 SUN1O94901 812 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 ERCC3P19447 782 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 PNOCQ13519 176 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 DBN1Q16643 649 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 AKNAD1Q5T1N1 836 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 JARID2Q92833 1246 aaPredicted RBP5.28□□□□□ -1.56
RC3H1-201ENST00000258349 SIRT1Q96EB6 747 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 GPAA1O43292 621 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 LMNB1P20700 586 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 SLC12A2P55011 1212 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 GALNT17Q6IS24 598 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 APPBP2Q92624 585 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 RNF34Q969K3 372 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 TRIM31Q9BZY9 425 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 H0YCG3 227 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 NGLY1Q96IV0 654 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 SUDS3Q9H7L9 328 aaPredicted RBP5.28□□□□□ -1.56
RC3H1-201ENST00000258349 ZNF277Q9NRM2 450 aaPredicted RBP5.28□□□□□ -1.56
RC3H1-201ENST00000258349 SAMD9LQ8IVG5 1584 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 SBNO2Q9Y2G9 1366 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 RXRAP19793 462 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 HOXA7P31268 230 aaPredicted RBP5.28□□□□□ -1.56
RC3H1-201ENST00000258349 GUCY2FP51841 1108 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 ARHGAP4P98171 946 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 MUM1L1Q5H9M0 696 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 C10orf76Q5T2E6 689 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 BEND3Q5T5X7 828 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 ADALQ6DHV7 355 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 MCTP2Q6DN12 878 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 KLHL7Q8IXQ5 586 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 STAG1Q8WVM7 1258 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 DSCC1Q9BVC3 393 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 TM6SF1Q9BZW5 370 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 XPO4Q9C0E2 1151 aaKnown RBP5.28□□□□□ -1.56
RC3H1-201ENST00000258349 KIAA1468Q9P260 1216 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 IPO11Q9UI26 975 aaKnown RBP5.28□□□□□ -1.56
RC3H1-201ENST00000258349 CLTCQ00610 1675 aaKnown RBP5.28□□□□□ -1.56
RC3H1-201ENST00000258349 B4E1Z4 1266 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 SEC24BO95487 1268 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 LMNB2Q03252 620 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 LONRF2Q1L5Z9 754 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 RRAGAQ7L523 313 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 C17orf53Q8N3J3 647 aaPredicted RBP5.28□□□□□ -1.56
RC3H1-201ENST00000258349 MYCT1Q8N699 235 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 ATP8B1O43520 1251 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 ARMC9Q7Z3E5 817 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 TTC6Q86TZ1 520 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 DZIP3Q86Y13 1208 aaKnown RBP5.28□□□□□ -1.56
RC3H1-201ENST00000258349 SLF1Q9BQI6 1058 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 TPX2Q9ULW0 747 aaKnown RBP5.28□□□□□ -1.56
RC3H1-201ENST00000258349 PTPRKQ15262 1439 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 TRIP11Q15643 1979 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 NR1I2O75469 434 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 RFC1P35251 1148 aaPredicted RBP5.27□□□□□ -1.57
RC3H1-201ENST00000258349 GNGT1P63211 74 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 RINT1Q6NUQ1 792 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 SND1Q7KZF4 910 aaKnown RBP eCLIP5.27□□□□□ -1.57
RC3H1-201ENST00000258349 PROCA1Q8NCQ7 364 aaPredicted RBP5.27□□□□□ -1.57
RC3H1-201ENST00000258349 CENPKQ9BS16 269 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 VPS37BQ9H9H4 285 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 PPP2R2CQ9Y2T4 447 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 ZFYVE16Q7Z3T8 1539 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 ABCA9Q8IUA7 1624 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 CHMP2AO43633 222 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 GADD45BO75293 160 aaPredicted RBP5.27□□□□□ -1.57
RC3H1-201ENST00000258349 ATP7BP35670 1465 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 DNM2P50570 870 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 PLCB4Q15147 1175 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 PLBD2Q8NHP8 589 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 TRIM6Q9C030 488 aaPredicted RBP5.27□□□□□ -1.57
RC3H1-201ENST00000258349 ARHGAP42A6NI28 874 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 RPS6KA2Q15349 733 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 TPTE2Q6XPS3 522 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 OR8K1Q8NGG5 319 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 DMRT2Q9Y5R5 561 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 IQGAP1P46940 1657 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 KDM6BO15054 1643 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 CLTCL1P53675 1640 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 F8W031 263 aaPredicted RBP5.27□□□□□ -1.57
RC3H1-201ENST00000258349 DEUP1Q05D60 604 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 DMP1Q13316 513 aaPredicted RBP5.27□□□□□ -1.57
RC3H1-201ENST00000258349 TRIM42Q8IWZ5 723 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 MRFAP1L1Q96HT8 127 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 GPCPD1Q9NPB8 672 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 TAB2Q9NYJ8 693 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 NOP56O00567 594 aaKnown RBP5.27□□□□□ -1.57
RC3H1-201ENST00000258349 ADAMTS2O95450 1211 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 SEPT2Q15019 361 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 LONRF3Q496Y0 759 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 TEX11Q8IYF3 940 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 CSRNP1Q96S65 589 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 RAB20Q9NX57 234 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 ANXA1P04083 346 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 HSPA8P11142 646 aaKnown RBP5.27□□□□□ -1.57
RC3H1-201ENST00000258349 ATF2P15336 505 aa5.27□□□□□ -1.57
RC3H1-201ENST00000258349 PALM2Q8IXS6 379 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms