RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 MMGT1Q8N4V1 131 aa12.91□□□□□ -0.34
TROAP-201ENST00000257909 RAPGEF4Q8WZA2 1011 aa12.91□□□□□ -0.34
TROAP-201ENST00000257909 EPSTI1Q96J88 318 aa12.91□□□□□ -0.34
TROAP-201ENST00000257909 CABP5Q9NP86 173 aa12.91□□□□□ -0.34
TROAP-201ENST00000257909 NUP188Q5SRE5 1749 aa12.9□□□□□ -0.34
TROAP-201ENST00000257909 MEGF6O75095 1541 aa12.9□□□□□ -0.34
TROAP-201ENST00000257909 FSBPO95073 299 aa12.9□□□□□ -0.34
TROAP-201ENST00000257909 PHKG2P15735 406 aa12.9□□□□□ -0.34
TROAP-201ENST00000257909 CYLC1P35663 651 aaPredicted RBP12.9□□□□□ -0.34
TROAP-201ENST00000257909 UBE3CQ15386 1083 aa12.9□□□□□ -0.34
TROAP-201ENST00000257909 RRAGBQ5VZM2 374 aa12.9□□□□□ -0.34
TROAP-201ENST00000257909 MICALCLQ6ZW33 695 aa12.9□□□□□ -0.34
TROAP-201ENST00000257909 FNBP4Q8N3X1 1017 aaPredicted RBP12.9□□□□□ -0.34
TROAP-201ENST00000257909 SYMPKQ92797 1274 aaKnown RBP12.9□□□□□ -0.34
TROAP-201ENST00000257909 CNNM2Q9H8M5 875 aa12.9□□□□□ -0.34
TROAP-201ENST00000257909 A0A1W2PQC6 194 aa12.9□□□□□ -0.34
TROAP-201ENST00000257909 TTC26A0AVF1 554 aa12.9□□□□□ -0.34
TROAP-201ENST00000257909 IPO7O95373 1038 aaKnown RBP12.9□□□□□ -0.34
TROAP-201ENST00000257909 CASP1P29466 404 aa12.9□□□□□ -0.34
TROAP-201ENST00000257909 ALX1Q15699 326 aa12.9□□□□□ -0.34
TROAP-201ENST00000257909 SND1Q7KZF4 910 aaKnown RBP eCLIP12.9□□□□□ -0.34
TROAP-201ENST00000257909 STAG1Q8WVM7 1258 aa12.9□□□□□ -0.34
TROAP-201ENST00000257909 RUFY1Q96T51 708 aa12.9□□□□□ -0.34
TROAP-201ENST00000257909 PYM1Q9BRP8 204 aaKnown RBP12.9□□□□□ -0.34
TROAP-201ENST00000257909 GNL3LQ9NVN8 582 aaKnown RBP12.9□□□□□ -0.34
TROAP-201ENST00000257909 CAPN11Q9UMQ6 739 aa12.9□□□□□ -0.34
TROAP-201ENST00000257909 CAPN7Q9Y6W3 813 aa12.9□□□□□ -0.34
TROAP-201ENST00000257909 LRP6O75581 1613 aa12.9□□□□□ -0.35
TROAP-201ENST00000257909 ALS2Q96Q42 1657 aa12.9□□□□□ -0.35
TROAP-201ENST00000257909 H0YHG0 523 aa12.89□□□□□ -0.35
TROAP-201ENST00000257909 NDUFAB1O14561 156 aa12.89□□□□□ -0.35
TROAP-201ENST00000257909 ZEB2O60315 1214 aa12.89□□□□□ -0.35
TROAP-201ENST00000257909 CRACR2BQ8N4Y2 399 aaPredicted RBP12.89□□□□□ -0.35
TROAP-201ENST00000257909 OTUD6BQ8N6M0 293 aa12.89□□□□□ -0.35
TROAP-201ENST00000257909 EHD4Q9H223 541 aa12.89□□□□□ -0.35
TROAP-201ENST00000257909 ZSWIM5Q9P217 1185 aa12.89□□□□□ -0.35
TROAP-201ENST00000257909 H7C1D1 291 aa12.89□□□□□ -0.35
TROAP-201ENST00000257909 MEFVO15553 781 aaPredicted RBP12.89□□□□□ -0.35
TROAP-201ENST00000257909 XBP1P17861 261 aa12.89□□□□□ -0.35
TROAP-201ENST00000257909 RCAN1P53805 252 aa12.89□□□□□ -0.35
TROAP-201ENST00000257909 EPHB4P54760 987 aa12.89□□□□□ -0.35
TROAP-201ENST00000257909 EMBQ6PCB8 327 aa12.89□□□□□ -0.35
TROAP-201ENST00000257909 YTHDF3Q7Z739 585 aaKnown RBP12.89□□□□□ -0.35
TROAP-201ENST00000257909 KRT23Q9C075 422 aa12.89□□□□□ -0.35
TROAP-201ENST00000257909 RMND1Q9NWS8 449 aa12.89□□□□□ -0.35
TROAP-201ENST00000257909 COL18A1P39060 1754 aa12.88□□□□□ -0.35
TROAP-201ENST00000257909 HSF2BPO75031 334 aa12.88□□□□□ -0.35
TROAP-201ENST00000257909 IDEP14735 1019 aa12.88□□□□□ -0.35
TROAP-201ENST00000257909 FNTAP49354 379 aa12.88□□□□□ -0.35
TROAP-201ENST00000257909 C2orf54Q08AI8 447 aa12.88□□□□□ -0.35
TROAP-201ENST00000257909 MEA1Q16626 185 aa12.88□□□□□ -0.35
TROAP-201ENST00000257909 ZNF658Q5TYW1 1059 aaPredicted RBP12.88□□□□□ -0.35
TROAP-201ENST00000257909 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.88□□□□□ -0.35
TROAP-201ENST00000257909 ZNF572Q7Z3I7 529 aaPredicted RBP12.88□□□□□ -0.35
TROAP-201ENST00000257909 CCDC170Q8IYT3 715 aa12.88□□□□□ -0.35
TROAP-201ENST00000257909 IFNL2Q8IZJ0 200 aa12.88□□□□□ -0.35
TROAP-201ENST00000257909 MB21D1Q8N884 522 aa12.88□□□□□ -0.35
TROAP-201ENST00000257909 OXER1Q8TDS5 423 aa12.88□□□□□ -0.35
TROAP-201ENST00000257909 NELFBQ8WX92 580 aa12.88□□□□□ -0.35
TROAP-201ENST00000257909 PAGR1Q9BTK6 254 aa12.88□□□□□ -0.35
TROAP-201ENST00000257909 JADE2Q9NQC1 790 aa12.88□□□□□ -0.35
TROAP-201ENST00000257909 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.88□□□□□ -0.35
TROAP-201ENST00000257909 CHD4Q14839 1912 aa12.88□□□□□ -0.35
TROAP-201ENST00000257909 PDE2AO00408 941 aaPredicted RBP12.88□□□□□ -0.35
TROAP-201ENST00000257909 MYCNP04198 464 aaPredicted RBP12.88□□□□□ -0.35
TROAP-201ENST00000257909 ZNF142P52746 1687 aaPredicted RBP12.88□□□□□ -0.35
TROAP-201ENST00000257909 WDR59Q6PJI9 974 aa12.88□□□□□ -0.35
TROAP-201ENST00000257909 PI16Q6UXB8 463 aa12.88□□□□□ -0.35
TROAP-201ENST00000257909 TMTC2Q8N394 836 aa12.88□□□□□ -0.35
TROAP-201ENST00000257909 AIDAQ96BJ3 306 aa12.88□□□□□ -0.35
TROAP-201ENST00000257909 ZNF512BQ96KM6 892 aaPredicted RBP12.88□□□□□ -0.35
TROAP-201ENST00000257909 PURBQ96QR8 312 aaKnown RBP12.88□□□□□ -0.35
TROAP-201ENST00000257909 TSGA10Q9BZW7 698 aa12.88□□□□□ -0.35
TROAP-201ENST00000257909 ZNHIT6Q9NWK9 470 aaKnown RBP12.88□□□□□ -0.35
TROAP-201ENST00000257909 SAMM50Q9Y512 469 aa12.88□□□□□ -0.35
TROAP-201ENST00000257909 LGALS16A8MUM7 142 aa12.87□□□□□ -0.35
TROAP-201ENST00000257909 GTPBP6O43824 516 aaPredicted RBP12.87□□□□□ -0.35
TROAP-201ENST00000257909 TATP17735 454 aaPredicted RBP12.87□□□□□ -0.35
TROAP-201ENST00000257909 ZNF622Q969S3 477 aaKnown RBP eCLIP12.87□□□□□ -0.35
TROAP-201ENST00000257909 DCAF5Q96JK2 942 aa12.87□□□□□ -0.35
TROAP-201ENST00000257909 MTA3Q9BTC8 594 aa12.87□□□□□ -0.35
TROAP-201ENST00000257909 AKAP11Q9UKA4 1901 aa12.87□□□□□ -0.35
TROAP-201ENST00000257909 PKD1L3Q7Z443 1732 aa12.87□□□□□ -0.35
TROAP-201ENST00000257909 XDHP47989 1333 aa12.87□□□□□ -0.35
TROAP-201ENST00000257909 MYH13Q9UKX3 1938 aa12.87□□□□□ -0.35
TROAP-201ENST00000257909 ERICH2A1L162 156 aa12.87□□□□□ -0.35
TROAP-201ENST00000257909 ZNF185O15231 689 aa12.87□□□□□ -0.35
TROAP-201ENST00000257909 PRLRP16471 622 aa12.87□□□□□ -0.35
TROAP-201ENST00000257909 EEF1GP26641 437 aaKnown RBP12.87□□□□□ -0.35
TROAP-201ENST00000257909 MCAMP43121 646 aa12.87□□□□□ -0.35
TROAP-201ENST00000257909 WTAPQ15007 396 aa12.87□□□□□ -0.35
TROAP-201ENST00000257909 LMOD2Q6P5Q4 547 aa12.87□□□□□ -0.35
TROAP-201ENST00000257909 ANKLE2Q86XL3 938 aa12.87□□□□□ -0.35
TROAP-201ENST00000257909 CAVIN3Q969G5 261 aa12.87□□□□□ -0.35
TROAP-201ENST00000257909 MYH6P13533 1939 aa12.86□□□□□ -0.35
TROAP-201ENST00000257909 PARP1P09874 1014 aaKnown RBP12.86□□□□□ -0.35
TROAP-201ENST00000257909 GPTP24298 496 aa12.86□□□□□ -0.35
TROAP-201ENST00000257909 TNFRSF8P28908 595 aa12.86□□□□□ -0.35
TROAP-201ENST00000257909 RDXP35241 583 aaKnown RBP12.86□□□□□ -0.35
TROAP-201ENST00000257909 APBA1Q02410 837 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms