RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 SNAP23O00161 211 aa13.77□□□□□ -0.2
USP30-201ENST00000257548 SF3B2Q13435 895 aaKnown RBP13.77□□□□□ -0.2
USP30-201ENST00000257548 SCARF1Q14162 830 aa13.77□□□□□ -0.2
USP30-201ENST00000257548 KCNH5Q8NCM2 988 aa13.77□□□□□ -0.2
USP30-201ENST00000257548 ANKRD26Q9UPS8 1709 aa13.77□□□□□ -0.2
USP30-201ENST00000257548 USP31Q70CQ4 1352 aa13.77□□□□□ -0.2
USP30-201ENST00000257548 BMP6P22004 513 aa13.77□□□□□ -0.21
USP30-201ENST00000257548 MAGEA1P43355 309 aa13.77□□□□□ -0.21
USP30-201ENST00000257548 PTGDRQ13258 359 aa13.77□□□□□ -0.21
USP30-201ENST00000257548 KIF6Q6ZMV9 814 aa13.77□□□□□ -0.21
USP30-201ENST00000257548 EHD2Q9NZN4 543 aa13.77□□□□□ -0.21
USP30-201ENST00000257548 SUFUQ9UMX1 484 aa13.77□□□□□ -0.21
USP30-201ENST00000257548 DUSP10Q9Y6W6 482 aa13.77□□□□□ -0.21
USP30-201ENST00000257548 TTC26A0AVF1 554 aa13.77□□□□□ -0.21
USP30-201ENST00000257548 GYPCP04921 128 aa13.77□□□□□ -0.21
USP30-201ENST00000257548 KRT2P35908 639 aa13.77□□□□□ -0.21
USP30-201ENST00000257548 IQCA1Q86XH1 822 aa13.77□□□□□ -0.21
USP30-201ENST00000257548 LRWD1Q9UFC0 647 aa13.77□□□□□ -0.21
USP30-201ENST00000257548 TRMT112Q9UI30 125 aaKnown RBP13.77□□□□□ -0.21
USP30-201ENST00000257548 CLTAP09496 248 aa13.76□□□□□ -0.21
USP30-201ENST00000257548 USP14P54578 494 aa13.76□□□□□ -0.21
USP30-201ENST00000257548 IFIT1BQ5T764 474 aaKnown RBP13.76□□□□□ -0.21
USP30-201ENST00000257548 UHMK1Q8TAS1 419 aaKnown RBP13.76□□□□□ -0.21
USP30-201ENST00000257548 ALDH8A1Q9H2A2 487 aaPredicted RBP13.76□□□□□ -0.21
USP30-201ENST00000257548 EPB41L5Q9HCM4 733 aa13.76□□□□□ -0.21
USP30-201ENST00000257548 ZSWIM5Q9P217 1185 aa13.76□□□□□ -0.21
USP30-201ENST00000257548 NFU1Q9UMS0 254 aa13.76□□□□□ -0.21
USP30-201ENST00000257548 SETD1AO15047 1707 aaKnown RBP13.76□□□□□ -0.21
USP30-201ENST00000257548 PPP1R12BO60237 982 aaPredicted RBP13.76□□□□□ -0.21
USP30-201ENST00000257548 MOCS3O95396 460 aa13.76□□□□□ -0.21
USP30-201ENST00000257548 MAP2K1Q02750 393 aaPredicted RBP13.76□□□□□ -0.21
USP30-201ENST00000257548 PPP1R7Q15435 360 aa13.76□□□□□ -0.21
USP30-201ENST00000257548 SPTY2D1Q68D10 685 aaPredicted RBP13.76□□□□□ -0.21
USP30-201ENST00000257548 TBC1D10CQ8IV04 446 aa13.76□□□□□ -0.21
USP30-201ENST00000257548 MICAL1Q8TDZ2 1067 aa13.76□□□□□ -0.21
USP30-201ENST00000257548 VEZTQ9HBM0 779 aa13.76□□□□□ -0.21
USP30-201ENST00000257548 HPCAL4Q9UM19 191 aa13.76□□□□□ -0.21
USP30-201ENST00000257548 NPHP4O75161 1426 aaPredicted RBP13.76□□□□□ -0.21
USP30-201ENST00000257548 KIF4AO95239 1232 aa13.76□□□□□ -0.21
USP30-201ENST00000257548 DEXIO95424 95 aa13.76□□□□□ -0.21
USP30-201ENST00000257548 CALRP27797 417 aaKnown RBP13.76□□□□□ -0.21
USP30-201ENST00000257548 ERCC5P28715 1186 aaPredicted RBP13.76□□□□□ -0.21
USP30-201ENST00000257548 ARHGAP25P42331 645 aa13.76□□□□□ -0.21
USP30-201ENST00000257548 NR1I3Q14994 352 aa13.76□□□□□ -0.21
USP30-201ENST00000257548 EZH2Q15910 746 aaKnown RBP13.76□□□□□ -0.21
USP30-201ENST00000257548 RRAGAQ7L523 313 aa13.76□□□□□ -0.21
USP30-201ENST00000257548 PROCA1Q8NCQ7 364 aaPredicted RBP13.76□□□□□ -0.21
USP30-201ENST00000257548 RRP36Q96EU6 259 aaKnown RBP13.76□□□□□ -0.21
USP30-201ENST00000257548 PLEKHG2Q9H7P9 1386 aa13.76□□□□□ -0.21
USP30-201ENST00000257548 RGPD8O14715 1765 aaPredicted RBP13.75□□□□□ -0.21
USP30-201ENST00000257548 MAP2K7O14733 419 aa13.75□□□□□ -0.21
USP30-201ENST00000257548 NCK2O43639 380 aa13.75□□□□□ -0.21
USP30-201ENST00000257548 TTC38Q5R3I4 469 aa13.75□□□□□ -0.21
USP30-201ENST00000257548 LRRC1Q9BTT6 524 aa13.75□□□□□ -0.21
USP30-201ENST00000257548 EXOC1Q9NV70 894 aa13.75□□□□□ -0.21
USP30-201ENST00000257548 GEMIN8Q9NWZ8 242 aaKnown RBP13.75□□□□□ -0.21
USP30-201ENST00000257548 CLGNO14967 610 aa13.75□□□□□ -0.21
USP30-201ENST00000257548 TCP11Q8WWU5 503 aa13.75□□□□□ -0.21
USP30-201ENST00000257548 PAGE5Q96GU1 130 aa13.75□□□□□ -0.21
USP30-201ENST00000257548 LUC7LQ9NQ29 371 aaKnown RBP13.75□□□□□ -0.21
USP30-201ENST00000257548 RIPOR2Q9Y4F9 1068 aa13.75□□□□□ -0.21
USP30-201ENST00000257548 A0A1B0GUA9 196 aa13.75□□□□□ -0.21
USP30-201ENST00000257548 PRKAB2O43741 272 aa13.75□□□□□ -0.21
USP30-201ENST00000257548 KRT18P05783 430 aaKnown RBP13.75□□□□□ -0.21
USP30-201ENST00000257548 NBPF14Q5TI25 921 aa13.75□□□□□ -0.21
USP30-201ENST00000257548 TMEM87BQ96K49 555 aa13.75□□□□□ -0.21
USP30-201ENST00000257548 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.75□□□□□ -0.21
USP30-201ENST00000257548 SH3TC1Q8TE82 1336 aa13.74□□□□□ -0.21
USP30-201ENST00000257548 GCKP35557 465 aa13.74□□□□□ -0.21
USP30-201ENST00000257548 CCDC40Q4G0X9 1142 aa13.74□□□□□ -0.21
USP30-201ENST00000257548 RMND1Q9NWS8 449 aa13.74□□□□□ -0.21
USP30-201ENST00000257548 FAM53CQ9NYF3 392 aa13.74□□□□□ -0.21
USP30-201ENST00000257548 HPS5Q9UPZ3 1129 aa13.74□□□□□ -0.21
USP30-201ENST00000257548 JAG2Q9Y219 1238 aa13.74□□□□□ -0.21
USP30-201ENST00000257548 NUTM2BA6NNL0 878 aaPredicted RBP13.74□□□□□ -0.21
USP30-201ENST00000257548 NUTM2EB1AL46 878 aaPredicted RBP13.74□□□□□ -0.21
USP30-201ENST00000257548 BUB1BO60566 1050 aaPredicted RBP13.74□□□□□ -0.21
USP30-201ENST00000257548 PARP1P09874 1014 aaKnown RBP13.74□□□□□ -0.21
USP30-201ENST00000257548 PTPREP23469 700 aa13.74□□□□□ -0.21
USP30-201ENST00000257548 HSPA2P54652 639 aa13.74□□□□□ -0.21
USP30-201ENST00000257548 ERVK-24P63145 666 aa13.74□□□□□ -0.21
USP30-201ENST00000257548 IFNL2Q8IZJ0 200 aa13.74□□□□□ -0.21
USP30-201ENST00000257548 CCDC51Q96ER9 411 aa13.74□□□□□ -0.21
USP30-201ENST00000257548 IL17RAQ96F46 866 aa13.74□□□□□ -0.21
USP30-201ENST00000257548 MLXIPQ9HAP2 919 aa13.74□□□□□ -0.21
USP30-201ENST00000257548 FAM184BQ9ULE4 1060 aa13.74□□□□□ -0.21
USP30-201ENST00000257548 COL15A1P39059 1388 aa13.74□□□□□ -0.21
USP30-201ENST00000257548 ANTXR2P58335 489 aa13.74□□□□□ -0.21
USP30-201ENST00000257548 APBA1Q02410 837 aa13.74□□□□□ -0.21
USP30-201ENST00000257548 PDE4DQ08499 809 aa13.74□□□□□ -0.21
USP30-201ENST00000257548 CUL4BQ13620 913 aa13.74□□□□□ -0.21
USP30-201ENST00000257548 NFRKBQ6P4R8 1299 aa13.74□□□□□ -0.21
USP30-201ENST00000257548 ADAT2Q7Z6V5 191 aaKnown RBP13.74□□□□□ -0.21
USP30-201ENST00000257548 RASGRP4Q8TDF6 673 aa13.74□□□□□ -0.21
USP30-201ENST00000257548 CEP89Q96ST8 783 aa13.74□□□□□ -0.21
USP30-201ENST00000257548 KRT12Q99456 494 aa13.74□□□□□ -0.21
USP30-201ENST00000257548 CEP83Q9Y592 693 aa13.74□□□□□ -0.21
USP30-201ENST00000257548 VIMP08670 466 aaKnown RBP13.73□□□□□ -0.21
USP30-201ENST00000257548 CD44P16070 742 aaKnown RBP13.73□□□□□ -0.21
USP30-201ENST00000257548 CYP7A1P22680 504 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms