RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 TSPY26PQ9H489 355 aa21.75■■□□□ 1.07
TRIM47-201ENST00000254816 VAT1LQ9HCJ6 419 aa21.75■■□□□ 1.07
TRIM47-201ENST00000254816 FZD9O00144 591 aa21.75■■□□□ 1.07
TRIM47-201ENST00000254816 SPTLC2O15270 562 aa21.75■■□□□ 1.07
TRIM47-201ENST00000254816 NR1I2O75469 434 aa21.75■■□□□ 1.07
TRIM47-201ENST00000254816 YEATS4O95619 227 aa21.75■■□□□ 1.07
TRIM47-201ENST00000254816 GMPSP49915 693 aaPredicted RBP21.75■■□□□ 1.07
TRIM47-201ENST00000254816 TOB1P50616 345 aaPredicted RBP21.75■■□□□ 1.07
TRIM47-201ENST00000254816 EARS2Q5JPH6 523 aaKnown RBP21.75■■□□□ 1.07
TRIM47-201ENST00000254816 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.75■■□□□ 1.07
TRIM47-201ENST00000254816 CABP5Q9NP86 173 aa21.75■■□□□ 1.07
TRIM47-201ENST00000254816 DACT1Q9NYF0 836 aa21.75■■□□□ 1.07
TRIM47-201ENST00000254816 MYO1BO43795 1136 aa21.74■■□□□ 1.07
TRIM47-201ENST00000254816 EEF2P13639 858 aaKnown RBP21.74■■□□□ 1.07
TRIM47-201ENST00000254816 NLRP5P59047 1200 aa21.74■■□□□ 1.07
TRIM47-201ENST00000254816 ABCB5Q2M3G0 1257 aa21.74■■□□□ 1.07
TRIM47-201ENST00000254816 NOM1Q5C9Z4 860 aaKnown RBP21.74■■□□□ 1.07
TRIM47-201ENST00000254816 ARHGAP27Q6ZUM4 889 aa21.74■■□□□ 1.07
TRIM47-201ENST00000254816 CCAR1Q8IX12 1150 aaKnown RBP21.74■■□□□ 1.07
TRIM47-201ENST00000254816 GOLPH3LQ9H4A5 285 aa21.74■■□□□ 1.07
TRIM47-201ENST00000254816 GPCPD1Q9NPB8 672 aa21.74■■□□□ 1.07
TRIM47-201ENST00000254816 ZNF541Q9H0D2 1346 aa21.74■■□□□ 1.07
TRIM47-201ENST00000254816 SBF1O95248 1867 aa21.73■■□□□ 1.07
TRIM47-201ENST00000254816 MARCKSP29966 332 aaPredicted RBP21.73■■□□□ 1.07
TRIM47-201ENST00000254816 TYW1BQ6NUM6 668 aa21.73■■□□□ 1.07
TRIM47-201ENST00000254816 HOMER1Q86YM7 354 aa21.73■■□□□ 1.07
TRIM47-201ENST00000254816 LZTS2Q9BRK4 669 aa21.73■■□□□ 1.07
TRIM47-201ENST00000254816 DICER1Q9UPY3 1922 aaKnown RBP21.73■■□□□ 1.07
TRIM47-201ENST00000254816 ATP2B1P20020 1258 aa21.73■■□□□ 1.07
TRIM47-201ENST00000254816 CAMK4Q16566 473 aa21.73■■□□□ 1.07
TRIM47-201ENST00000254816 WWC2Q6AWC2 1192 aa21.73■■□□□ 1.07
TRIM47-201ENST00000254816 SAMD7Q7Z3H4 446 aa21.73■■□□□ 1.07
TRIM47-201ENST00000254816 MICALL2Q8IY33 904 aa21.73■■□□□ 1.07
TRIM47-201ENST00000254816 SPZ1Q9BXG8 430 aa21.73■■□□□ 1.07
TRIM47-201ENST00000254816 RAD21O60216 631 aa21.72■■□□□ 1.07
TRIM47-201ENST00000254816 PTPAQ15257 358 aa21.72■■□□□ 1.07
TRIM47-201ENST00000254816 HEATR3Q7Z4Q2 680 aa21.72■■□□□ 1.07
TRIM47-201ENST00000254816 KCNG4Q8TDN1 519 aa21.72■■□□□ 1.07
TRIM47-201ENST00000254816 GH2P01242 217 aa21.72■■□□□ 1.07
TRIM47-201ENST00000254816 SNHG28P0DPA3 235 aa21.72■■□□□ 1.07
TRIM47-201ENST00000254816 ZNF280AP59817 542 aaPredicted RBP21.72■■□□□ 1.07
TRIM47-201ENST00000254816 SLC39A14Q15043 492 aa21.72■■□□□ 1.07
TRIM47-201ENST00000254816 SIAH1Q8IUQ4 282 aa21.72■■□□□ 1.07
TRIM47-201ENST00000254816 SRCAPQ6ZRS2 3230 aa21.72■■□□□ 1.07
TRIM47-201ENST00000254816 RPS12P25398 132 aaKnown RBP21.71■■□□□ 1.07
TRIM47-201ENST00000254816 TBC1D10BQ4KMP7 808 aaPredicted RBP21.71■■□□□ 1.07
TRIM47-201ENST00000254816 TMEM179Q6ZVK1 233 aa21.71■■□□□ 1.07
TRIM47-201ENST00000254816 MIGA2Q7L4E1 593 aa21.71■■□□□ 1.07
TRIM47-201ENST00000254816 PIGSQ96S52 555 aa21.71■■□□□ 1.07
TRIM47-201ENST00000254816 KANSL2Q9H9L4 492 aa21.71■■□□□ 1.07
TRIM47-201ENST00000254816 CNOT7Q9UIV1 285 aaKnown RBP21.71■■□□□ 1.07
TRIM47-201ENST00000254816 ASTN2O75129 1339 aaPredicted RBP21.71■■□□□ 1.07
TRIM47-201ENST00000254816 ICA1Q05084 483 aa21.71■■□□□ 1.07
TRIM47-201ENST00000254816 TTBK2Q6IQ55 1244 aa21.71■■□□□ 1.07
TRIM47-201ENST00000254816 PDLIM2Q96JY6 352 aa21.71■■□□□ 1.07
TRIM47-201ENST00000254816 BRMS1Q9HCU9 246 aa21.71■■□□□ 1.07
TRIM47-201ENST00000254816 HERC5Q9UII4 1024 aaKnown RBP21.71■■□□□ 1.07
TRIM47-201ENST00000254816 PCDHB6Q9Y5E3 794 aa21.71■■□□□ 1.07
TRIM47-201ENST00000254816 ASPRV1Q53RT3 343 aa21.7■■□□□ 1.06
TRIM47-201ENST00000254816 FKBP1CQ5VVH2 108 aa21.7■■□□□ 1.06
TRIM47-201ENST00000254816 ADALQ6DHV7 355 aa21.7■■□□□ 1.06
TRIM47-201ENST00000254816 KCTD1Q719H9 257 aa21.7■■□□□ 1.06
TRIM47-201ENST00000254816 FSIP1Q8NA03 581 aa21.7■■□□□ 1.06
TRIM47-201ENST00000254816 TNFRSF25Q93038 417 aa21.7■■□□□ 1.06
TRIM47-201ENST00000254816 ZNF543Q08ER8 600 aa21.69■■□□□ 1.06
TRIM47-201ENST00000254816 CCDC96Q2M329 555 aa21.69■■□□□ 1.06
TRIM47-201ENST00000254816 RILPL1Q5EBL4 403 aa21.69■■□□□ 1.06
TRIM47-201ENST00000254816 FAM83AQ86UY5 434 aa21.69■■□□□ 1.06
TRIM47-201ENST00000254816 RRP36Q96EU6 259 aaKnown RBP21.69■■□□□ 1.06
TRIM47-201ENST00000254816 NUP62CLQ9H1M0 184 aa21.69■■□□□ 1.06
TRIM47-201ENST00000254816 NYAP2Q9P242 653 aa21.69■■□□□ 1.06
TRIM47-201ENST00000254816 STXBP3O00186 592 aa21.69■■□□□ 1.06
TRIM47-201ENST00000254816 RIOX1Q9H6W3 641 aa21.69■■□□□ 1.06
TRIM47-201ENST00000254816 A0A1B0GVL5 298 aa21.68■■□□□ 1.06
TRIM47-201ENST00000254816 SLC16A2P36021 539 aa21.68■■□□□ 1.06
TRIM47-201ENST00000254816 MKL1Q969V6 931 aa21.68■■□□□ 1.06
TRIM47-201ENST00000254816 SH3GLB2Q9NR46 395 aa21.68■■□□□ 1.06
TRIM47-201ENST00000254816 BARHL2Q9NY43 387 aa21.68■■□□□ 1.06
TRIM47-201ENST00000254816 PGAP2Q9UHJ9 254 aa21.68■■□□□ 1.06
TRIM47-201ENST00000254816 WNT7AO00755 349 aa21.68■■□□□ 1.06
TRIM47-201ENST00000254816 AXDND1Q5T1B0 1012 aaPredicted RBP21.68■■□□□ 1.06
TRIM47-201ENST00000254816 RASGRP4Q8TDF6 673 aa21.68■■□□□ 1.06
TRIM47-201ENST00000254816 DPF2Q92785 391 aa21.68■■□□□ 1.06
TRIM47-201ENST00000254816 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.68■■□□□ 1.06
TRIM47-201ENST00000254816 SMARCA1P28370 1054 aa21.67■■□□□ 1.06
TRIM47-201ENST00000254816 SNW1Q13573 536 aaKnown RBP21.67■■□□□ 1.06
TRIM47-201ENST00000254816 RASA3Q14644 834 aa21.67■■□□□ 1.06
TRIM47-201ENST00000254816 PPP4R3BQ5MIZ7 849 aa21.67■■□□□ 1.06
TRIM47-201ENST00000254816 PIK3AP1Q6ZUJ8 805 aa21.67■■□□□ 1.06
TRIM47-201ENST00000254816 MRPS27Q92552 414 aaKnown RBP21.67■■□□□ 1.06
TRIM47-201ENST00000254816 CLIC6Q96NY7 704 aa21.67■■□□□ 1.06
TRIM47-201ENST00000254816 DDX19AQ9NUU7 478 aaKnown RBP21.67■■□□□ 1.06
TRIM47-201ENST00000254816 SEC63Q9UGP8 760 aaKnown RBP21.67■■□□□ 1.06
TRIM47-201ENST00000254816 ATAD5Q96QE3 1844 aa21.67■■□□□ 1.06
TRIM47-201ENST00000254816 CCDC73Q6ZRK6 1079 aa21.67■■□□□ 1.06
TRIM47-201ENST00000254816 ZSCAN30Q86W11 494 aa21.67■■□□□ 1.06
TRIM47-201ENST00000254816 BLIDQ8IZY5 108 aa21.67■■□□□ 1.06
TRIM47-201ENST00000254816 PCDHA4Q9UN74 947 aa21.67■■□□□ 1.06
TRIM47-201ENST00000254816 MRVI1Q9Y6F6 885 aa21.67■■□□□ 1.06
TRIM47-201ENST00000254816 PPP6R2O75170 966 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms