RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 LSG1Q9H089 658 aaKnown RBP16.82■□□□□ 0.28
CNN1-201ENST00000252456 ADAMTS5Q9UNA0 930 aa16.82■□□□□ 0.28
CNN1-201ENST00000252456 RAD21O60216 631 aa16.81■□□□□ 0.28
CNN1-201ENST00000252456 PRMT2P55345 433 aa16.81■□□□□ 0.28
CNN1-201ENST00000252456 HOXC10Q9NYD6 342 aa16.81■□□□□ 0.28
CNN1-201ENST00000252456 B4E1Z4 1266 aa16.81■□□□□ 0.28
CNN1-201ENST00000252456 KDM4AO75164 1064 aa16.81■□□□□ 0.28
CNN1-201ENST00000252456 CAPN15O75808 1086 aa16.81■□□□□ 0.28
CNN1-201ENST00000252456 ESR2Q92731 530 aa16.81■□□□□ 0.28
CNN1-201ENST00000252456 ARMC5Q96C12 935 aa16.81■□□□□ 0.28
CNN1-201ENST00000252456 GJD2Q9UKL4 321 aa16.81■□□□□ 0.28
CNN1-201ENST00000252456 U3KPZ7 1027 aaPredicted RBP16.81■□□□□ 0.28
CNN1-201ENST00000252456 RBBP6Q7Z6E9 1792 aaKnown RBP16.8■□□□□ 0.28
CNN1-201ENST00000252456 FLT3LGP49771 235 aa16.8■□□□□ 0.28
CNN1-201ENST00000252456 PPP4R3BQ5MIZ7 849 aa16.8■□□□□ 0.28
CNN1-201ENST00000252456 SLFN13Q68D06 897 aa16.8■□□□□ 0.28
CNN1-201ENST00000252456 PPP1R9AQ9ULJ8 1098 aa16.8■□□□□ 0.28
CNN1-201ENST00000252456 RBM8AQ9Y5S9 174 aaKnown RBP16.8■□□□□ 0.28
CNN1-201ENST00000252456 CCDC85CA6NKD9 419 aa16.79■□□□□ 0.28
CNN1-201ENST00000252456 CDC45O75419 566 aa16.79■□□□□ 0.28
CNN1-201ENST00000252456 HOXD10P28358 340 aa16.79■□□□□ 0.28
CNN1-201ENST00000252456 NT5C2P49902 561 aa16.79■□□□□ 0.28
CNN1-201ENST00000252456 STOX1Q6ZVD7 989 aa16.79■□□□□ 0.28
CNN1-201ENST00000252456 REPS2Q8NFH8 660 aa16.79■□□□□ 0.28
CNN1-201ENST00000252456 GMCL1Q96IK5 515 aa16.79■□□□□ 0.28
CNN1-201ENST00000252456 TMEM47Q9BQJ4 181 aa16.79■□□□□ 0.28
CNN1-201ENST00000252456 ZKSCAN3Q9BRR0 538 aa16.79■□□□□ 0.28
CNN1-201ENST00000252456 ZSWIM5Q9P217 1185 aa16.79■□□□□ 0.28
CNN1-201ENST00000252456 ZNF236Q9UL36 1845 aa16.78■□□□□ 0.28
CNN1-201ENST00000252456 VWA5AO00534 786 aa16.78■□□□□ 0.28
CNN1-201ENST00000252456 MAPK4P31152 587 aa16.78■□□□□ 0.28
CNN1-201ENST00000252456 MB21D1Q8N884 522 aa16.78■□□□□ 0.28
CNN1-201ENST00000252456 COA7Q96BR5 231 aa16.78■□□□□ 0.28
CNN1-201ENST00000252456 SLF1Q9BQI6 1058 aa16.78■□□□□ 0.28
CNN1-201ENST00000252456 MOV10L1Q9BXT6 1211 aaKnown RBP16.78■□□□□ 0.28
CNN1-201ENST00000252456 SPATC1LQ9H0A9 340 aa16.78■□□□□ 0.28
CNN1-201ENST00000252456 TOP1P11387 765 aaKnown RBP16.78■□□□□ 0.28
CNN1-201ENST00000252456 BMP3P12645 472 aa16.78■□□□□ 0.28
CNN1-201ENST00000252456 IRF5Q13568 498 aa16.78■□□□□ 0.28
CNN1-201ENST00000252456 TMEM132BQ14DG7 1078 aa16.78■□□□□ 0.28
CNN1-201ENST00000252456 SLC9C1Q4G0N8 1177 aa16.78■□□□□ 0.28
CNN1-201ENST00000252456 SAMD1Q6SPF0 538 aaPredicted RBP16.78■□□□□ 0.28
CNN1-201ENST00000252456 GPR142Q7Z601 462 aa16.78■□□□□ 0.28
CNN1-201ENST00000252456 SH3TC2Q8TF17 1288 aa16.78■□□□□ 0.28
CNN1-201ENST00000252456 ZNF333Q96JL9 665 aa16.78■□□□□ 0.28
CNN1-201ENST00000252456 TTC14Q96N46 770 aa16.78■□□□□ 0.28
CNN1-201ENST00000252456 CNNM2Q9H8M5 875 aa16.78■□□□□ 0.28
CNN1-201ENST00000252456 ZNF214Q9UL59 606 aaPredicted RBP16.78■□□□□ 0.28
CNN1-201ENST00000252456 MKI67P46013 3256 aaKnown RBP16.77■□□□□ 0.28
CNN1-201ENST00000252456 KIAA0100Q14667 2235 aaKnown RBP16.77■□□□□ 0.28
CNN1-201ENST00000252456 MCCP23508 829 aa16.77■□□□□ 0.27
CNN1-201ENST00000252456 CCNA1P78396 465 aa16.77■□□□□ 0.27
CNN1-201ENST00000252456 MORN1Q5T089 497 aa16.77■□□□□ 0.27
CNN1-201ENST00000252456 CYB5R4Q7L1T6 521 aa16.77■□□□□ 0.27
CNN1-201ENST00000252456 RAET1EQ8TD07 263 aa16.77■□□□□ 0.27
CNN1-201ENST00000252456 USP6NLQ92738 828 aa16.77■□□□□ 0.27
CNN1-201ENST00000252456 CHMP4CQ96CF2 233 aa16.77■□□□□ 0.27
CNN1-201ENST00000252456 KRT23Q9C075 422 aa16.77■□□□□ 0.27
CNN1-201ENST00000252456 E7EWF7 191 aa16.76■□□□□ 0.27
CNN1-201ENST00000252456 SLC1A4P43007 532 aa16.76■□□□□ 0.27
CNN1-201ENST00000252456 NECTIN1Q15223 517 aa16.76■□□□□ 0.27
CNN1-201ENST00000252456 KIAA1211Q6ZU35 1233 aa16.76■□□□□ 0.27
CNN1-201ENST00000252456 KCTD1Q719H9 257 aa16.76■□□□□ 0.27
CNN1-201ENST00000252456 DGKHQ86XP1 1220 aa16.76■□□□□ 0.27
CNN1-201ENST00000252456 ENAHQ8N8S7 591 aaPredicted RBP16.76■□□□□ 0.27
CNN1-201ENST00000252456 PRPF38AQ8NAV1 312 aaKnown RBP16.76■□□□□ 0.27
CNN1-201ENST00000252456 ANKS1AQ92625 1134 aa16.76■□□□□ 0.27
CNN1-201ENST00000252456 ZSCAN10Q96SZ4 725 aaPredicted RBP16.76■□□□□ 0.27
CNN1-201ENST00000252456 ANO2Q9NQ90 1003 aa16.76■□□□□ 0.27
CNN1-201ENST00000252456 FEM1BQ9UK73 627 aa16.76■□□□□ 0.27
CNN1-201ENST00000252456 ZNFX1Q9P2E3 1918 aaKnown RBP16.75■□□□□ 0.27
CNN1-201ENST00000252456 TMEM232C9JQI7 657 aa16.75■□□□□ 0.27
CNN1-201ENST00000252456 SNHG28P0DPA3 235 aa16.75■□□□□ 0.27
CNN1-201ENST00000252456 ELNP15502 786 aa16.75■□□□□ 0.27
CNN1-201ENST00000252456 GRK4P32298 578 aa16.75■□□□□ 0.27
CNN1-201ENST00000252456 COL9A3Q14050 684 aaPredicted RBP16.75■□□□□ 0.27
CNN1-201ENST00000252456 PLEKHH3Q7Z736 793 aa16.75■□□□□ 0.27
CNN1-201ENST00000252456 IQCA1Q86XH1 822 aa16.75■□□□□ 0.27
CNN1-201ENST00000252456 SHCBP1Q8NEM2 672 aa16.75■□□□□ 0.27
CNN1-201ENST00000252456 TNKSO95271 1327 aa16.75■□□□□ 0.27
CNN1-201ENST00000252456 SLC27A2O14975 620 aa16.74■□□□□ 0.27
CNN1-201ENST00000252456 ADCY3O60266 1144 aa16.74■□□□□ 0.27
CNN1-201ENST00000252456 PLA2G6O60733 806 aa16.74■□□□□ 0.27
CNN1-201ENST00000252456 PDHBP11177 359 aa16.74■□□□□ 0.27
CNN1-201ENST00000252456 ERCC3P19447 782 aa16.74■□□□□ 0.27
CNN1-201ENST00000252456 PXYLP1Q8TE99 480 aa16.74■□□□□ 0.27
CNN1-201ENST00000252456 DCAF4Q8WV16 495 aa16.74■□□□□ 0.27
CNN1-201ENST00000252456 SOCS4Q8WXH5 440 aa16.74■□□□□ 0.27
CNN1-201ENST00000252456 KIFC2Q96AC6 838 aa16.74■□□□□ 0.27
CNN1-201ENST00000252456 MTMR7Q9Y216 660 aa16.74■□□□□ 0.27
CNN1-201ENST00000252456 PTPREP23469 700 aa16.74■□□□□ 0.27
CNN1-201ENST00000252456 STAT2P52630 851 aa16.74■□□□□ 0.27
CNN1-201ENST00000252456 SOX10P56693 466 aa16.74■□□□□ 0.27
CNN1-201ENST00000252456 PLS1Q14651 629 aa16.74■□□□□ 0.27
CNN1-201ENST00000252456 SEC23AQ15436 765 aa16.74■□□□□ 0.27
CNN1-201ENST00000252456 CREB3L3Q68CJ9 461 aa16.74■□□□□ 0.27
CNN1-201ENST00000252456 CASC1Q6TDU7 716 aa16.74■□□□□ 0.27
CNN1-201ENST00000252456 RIOX2Q8IUF8 465 aa16.74■□□□□ 0.27
CNN1-201ENST00000252456 SLAIN1Q8ND83 568 aa16.74■□□□□ 0.27
CNN1-201ENST00000252456 NUDT12Q9BQG2 462 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms